Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <------ZmHOX2a(1)                                                                                   <---------At4g35610                                                                         --------->TOE2(3)                                                                         --------->TOE1(3)    -------       <----------DOF2                                                <-----------GT1 --------->ANAC58 -->MYC3                                   ---------->DOF2          <---------MYB52(2)--------->ANAC58 ---MYC3  --------->ATHB12<---------------AtSPL8               --------->TOE2(3)   --------->At4g35610   tgagtatgcctttgattagcaaatggatatagtactaaacagcttgaaagaagaaaacactgaaaccacaattaaccttgatgtctgcaggaaatataac  13550300                        --------->ARR14(2)                  <---------At4g35610                        <---------ARR14(2)             --------->CCA1(2)       <---------At4g35610                          --------->ANAC58       <---------TOE2(3)       --------->At4g35610  ------>ZmHOX2a(1)  --------->ZAT6 --------->ZAT18       <---------GLK1(1)  --------->GLK1(1)    <---------CCA1(2)    <---------ATHB12--------->At4g35610  <---------YAB1  <---------GLK1(1)  --------->YAB1 <---------ANAC58--------->ANAC46    --------->ALFIN1 -->MYB52(1)  --------->MYB52(1)    <---------ANAC58--------->ANAC58  --------->CCA1(2)    --------->ZAT14   agagatttcagctaaacaacgaatcatatcctccaaatgcttcccaataacaccaagacatgagctcacaagagatggaggttttgatttcagtggagac  13550400                                                      --------->AtLEC2                                                  ------>MYB46(1)                                                  ------>MYB83  <---------------AGL15                                                 --------->ANAC58                                                 --------->ANAC58                                                 --------->ANAC46                                                <---------MYB55(2)                                                --------->MYB46(3)                                <--  ------>ZmHOX2a(1)                       <-----------GT1      ----------------->AGL3          ------ --------->TOE1(2)                     <---------ICU4 --------->ICU4                     --------->ANAC58 --------->TOE2(2)                    ------>ZmHOX2a(1)        ----------------->AGL2    --------->ANAC58   attcctgcgattgaagcaaaccattgtcaaattccaactcctaattaccaccagccatgcttagacccaaattcagtaatccattctcagaacccaattt  13550500                                                   --------->CCA1(2)                                                  <---------ARR14(2)                                                  --------->ARR14(2)                                                  <---------ARR11(3)                                             <---------ANAC46                                        <---------ANAC58                                        <---------ANAC55(1)                                        --------->bZIP60(1)                                        --------->TGA1a                                        <---------ANAC46                                        <---------ANAC58                                        <---------ANAC55(2)                                        --------->ANAC55(2)                                        <---------O2            ---------->DOF2             --------->O2        --------->HSFB2a(2)         <---------ANAC58 <---------ANAC55(2)        <---------HSFB2a(2)         <---------ANAC58<-------TEIL                                  <--    --------->ZAT2         =======================bZIP_DOF                           <---------WRKY45    <---------ZAT2         ---------->DOF2----------->TGA1            <-----------ARR10         ----- =================================================MYC_MYB             --------->GLK1(2) --------->MYB46(3) ------->GAMYB           --------->ETT(2) ----------->HVH21          <---------GLK1(2)  --------->ANAC46 ---------GT1       <---------GLK1(2)   <---------TGA1a   --------->At4g35610        <---------WRKY38(1) --->YAB1   ======================================bZIP_DOF<---------At4g35610        <---------WRKY12   taaccgagctcgagaaaagaaagattgtcgaaagcgaggcttacgtgacgaagatacataagctgaaacaagaatcttattctctggtccacgaccacga  13550600                                                                                <---------GLK1(2)                                                                               --------->HSFB2a(1)                                                                               --------->GLK1(1)                                                                              ----------->ARR10                                                                             <------NtERF2                                                                            --------->LBD16                                                                        ===========================HOX2a_HOX2a                                                                        ------>ZmHOX2a(2)                                    <----------DOF2                 <---------YAB1                                    <---------DAG2              --------->GLK1(1)                                  <---------At4g35610           <---------GLK1(1)   <---------YAB1                                  --------->At4g35610     --------->LBD16  --------->DEAR3(1)       - -----TEIL     --------->GLK1(2)  <---------ZAT2       <---------At5g28300<---------LBD16   <------ZmHOX2a(1) ---->ARR14(2)<---------GLK1(2)   <------NtERF2--------->YAB1  <---------ARR11(3)--------->GLK1(2)  <   ttcgtattcaaatcgagattcttgagcgattttggcagcttttcttccatcaaaattcaccgcgagatttctgatcgccggagattctaatcgaggaata  13550700          <------NtERF2        <---------ANAC46       <------NtERF2       <---------LBD16      <---------ATERF1(1)      <---------RAP2.3(1)      <---------ORA47(2)     <---------DEAR3(1)    --------->SPL7                                       <---------TOE1(3)    --------->ATERF1(1)                                  <---------TOE2(3)    <---------ORA47(1)                                  --------->MYB52(1)   --------->MYB52(1)                               ------>MYB46(1)   ------>NtERF2                                    ------>MYB83  --------->ARR11(3)   <---------ATERF1(1)                           --------->DEAR3(2) ------>ZmHOX2a(2)  <---------SPL7               --------->At4g35610------->GAMYB <---------YAB1  ----------->HVH21         *TSS                 <------------MYB.PH3(1)       ------->TEIL -------->At4g35610      <---------YAB1        --------->MYB52(1) <---------ARR11(3) ---------At4g35610 ------->TEIL            --------->YAB1 --------->TOE2(3)  <---------CCA1(2)   ttagcggacggcggattatatgaacttctaattagctcaaaccgaaacataaccgacttaacgtttatgatctctcatttgtatctctctaatctctctt  13550800             --------->ATHB12               <-----------GT1                    <------ZmHOX2a(2)          <---------ANAC46                 <-----------GT1                    --------->ARR11(3)          --------->ANAC55(2)             <---------AHL20(2)                  <---------ARR11(3)          <---------ANAC58          --------->ANAC58                         <---------At4g35610          <---------ANAC58          --------->ANAC46                        <XXXXXXXXXXXXXXXXXXXXMIR863-5P          <---------O2              <---------ANAC55(2)                --------->ATHB12          <---------ANAC55(1)       --------->ANAC58                  <---------AHL20(2)          <---------ANAC55(2)       --------->ANAC55(1)               --------->AHL20(1)         ----          --------->bZIP60(1)       --------->ANAC55(2)               <---------AHL20(1)--------->ANAC55(2)          <---------bZIP60(1)       ----------->GT1   --------->TOE2(3)<---------AHL20(2)     <------        <-----------GT1       <-----------HVH21    ----------->RAV1(1)--------->AHL20(2)<---------ANAC55(2)   gtgtaatatgttacgtgattagtctcgctctgtttcagacgtaatttaacttccaacatttatgaactgcaatttattgagatcaccaatatgtgatcaa  13550900                           <---------TOE2(3)           --------->ANAC46                            --                         <---------AHL20(2)            --------->ANAC58                           <--   <---------DAG2    --------->YAB1                    --------->ANAC58                           <--   <----------DOF2  <---------ATHB12        ----------->RAV1(1)                                  ---- ----->ANAC46     --------->WOX13(1)       --------->REM1(1)                                     ---- ---WRKY38(1)  --------->GLK1(2)  --------->YAB1     <-----------GT1                             <---   cgatactttttccaaagaatcaatcatataatgttttcatattctacaacatttttcacccaaattcaactccgataaaccaatgcaaaaaaaccccaat  13551000   --------->ANAC46   <----------ID1                                                                        <-----------GT1   --------->ANAC58                                                                     <-----------GT1   --------->ANAC58                                                   <-----------------AGL3 ------->YAB1                                                      <------ZmHOX2a(1)<----------DOF2 < -------YAB1                ----------->RAV1(1)        ----------->GT1----------------->AGL2        < -------AHL20(2)         --------->ANAC46              <----------ID1 ----------------->AGL3--------- ----->AHL20(2)          --------->ANAC58             ----------->GT1 =============================== ----->AHL20(1)          --------->ANAC58  --------->MYB52(1)  --------->TOE1(2)<------ZmHOX2a(1)  <- ------AHL20(1)      --------->ZAT6     --------->ANAC46<------ZmHOX2a(1)   --------->TOE1(2)      --   ataataagccaaaacagagcttaacactcgcaacatacttacacaaaaccgaagaataggaaaaaactaggaaccaaaactaggacctttttaaccctta  13551100                                                                                              -------                                                                                             <-------    <------MYB83                                                                            <--------    <------MYB46(1)                                                                        ------->GAMYB  <--------P                                                                              <---------- ------MYB46(1)                                                                          --------->At4g35610 ------MYB83---------->DOF2                                                              <---------At4g35610 ------>AGL15                                                                     <---------ARR14(2) =======MADS_MADS       --------->CCA1(2)              <---------TOE2(3)         <------ZmHOX2a(1) --------TOE2(3)     <---------TOE2(3)         <----------DOF2    <---------ANAC46--------->ARR14(2) ------->MYB59     ---------->DOF2        --------->YAB1      <----------DOF2<---------MYB52(1)   ttaggttggagaggcaaagaataaaggtatgaaaccaaaaacaatgagactttgtttatggaaactttgtgtagaaaccattaggaactgcaactgtcat  13551200  Previous    Next  AGI:  At4g26980.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO38952.1); contains domain SSF52047 (SSF52047); contains domain PTHR23125 (PTHR23125); contains domain G3DSA:3.80.10.10 (G3DSA:3.80.10.10); contains domain PTHR23125:SF67 (PTHR23125:SF67) Range:  from: 13548552    to: 13550728    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54920.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82076.1); contains InterPro domain Like-Sm ribonucleoprotein-related, core (InterPro:IPR010920) Range:  from: 13550912    to: 13554392    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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