Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------YAB1                                                                            --------->AHL20(2)                        <-----------GT1                                     <---------AHL20(1)               --------->ANAC58                  <---------At4g35610        --------->AHL20(1)  <---------ANAC55(2)  <---------CCA1(2)         --------->At4g35610        <---------AHL20(2) ----ANAC46    --------->ANAC58          --------->AHL20(2)          ----------->GT1 -MYB46(3)    --------->SPL7             <---------AHL20(2)    <---------------AtSPL3  <-------GAMYB -AtMYB61    <---------MYB52(1)         --------->AHL20(2)     <---------------AtSPL8 <-----------RAV1(1)   tattacatataaaccgtaagcccttatatccattctccaatatttaatttcatctcaaattcaaactggtactgaaaatttattatttctgttgttattt  13515100                                <---------AtLEC2                            ------>ZmHOX2a(1)                                                  <-----                      <---------ARR11(3)                      <---------AHL20(2)          <XXXXXXXXXX                      --------->ARR11(3)                   <---------AHL20(1)             <----------DOF2                     <---------CCA1(2)              <----------DOF2                    <---------AHL20(2)                 <---------AHL20(2)    <-----------GT1     <---------ARR11(3)          <-----------GT1                 --------->AHL20(2) <---------ARR11(3)     --------->AHL20(1)    <---------GLK1(2)   ctctaagagacttatctatatatatatctcctatgcatgatatactatatagaactttcaatatttttttttttttgatcaaagattattttcttttctt  13515200                <-----------GT1             --------->YAB1                                                                      ----             --------->WOX13(1)                                                              --------        <---------AHL20(2)                                                                   --------        --------->AHL20(2)                --------->AHL20(1)                       ----------->GT1 -- -----DOF2 <---------YAB1                 <---------AHL20(1)            <----------DOF2  <----------DOF2 XXXXXXXXXXXMIR855 <----------DOF2   --------->YAB1                     <---------DAG2<-----------GT1   taacttgtgttttattaatcactttctatccgttgtaaatcatatatattaagagcatgagtctaaaatactcacttttggtgactagtaactttgctgt  13515300                                                                                             --------                                                                                            ---------      <---------AHL20(2)                                                          ---------->DOF2 --->TEIL     ---------->DOF2                                                <-------TEIL   <-------- ------->AtSPL3             --------->GLK1(2)                           ---------->DOF2    <---------ATHB12 ------->AtSPL8          --------->ANAC46                            <---------YAB1        --------->AHL20(2) ------->TOE2(3)       --------->REM1(1)                          <---------MYB52(1)   ------------>CBF   accttcattttttttaaaaagagctacaagactctgtaagagtgaaacgaagcccaatcccattatctgttatgaaaagttcataaaagcccaattaata  13515400                                                                       ------>NtERF2                                                                ----------->TGA1                                          <--------P            ----------->HVH21                                          ============================MYC_MYB                                       <---------ZAT6       ==========================bZIP_DOF                                       --------->ALFIN1     <---------ANAC46                                     <---------ANAC46       <---------ANAC58                                   --------->ZAT18          <---------ANAC58         --------->ZAT14           --------->ZAT14          <---------bZIP60(2)         <---------REM1(2)      --------->MYB52(2)          <---------TGA1a           --------->MYB46(3)         <---------ZAT14      <---------MYB52(1)            <---------O2            *TSS       --------->ANAC46  --------->bZIP60(1)               <-----------------------TaNAC69(2)     <-----------GT1     <---------O2<---------ANAC58    ----------->TGA1  <----------DOF2 ->AHL20(2)              --------->O2<---------ANAC58    ----------->HVH21<---------DAG2 >AHL20(2)               <---------bZIP60(1)         ---------->DOF2  --------->DEAR3(1)          --- -AHL20(2)      <------ZmHOX2a(1)  <---------ZAT14   =================bZIP_DOF      <-----------GT1   tacaaattcactacacgaggagaaacgacgtcgttagtggagtggtaagtgttgacaaagtgacgagtgacgacgaccttttgaattaacaatcgaagca  13515500                                  <------NtERF2                                 ------>NtERF2                                --------->RAP2.3(3)                                --------->RRTF1(2)                                --------->DEAR3(1)                                --------->RAP2.3(2)                                --------->RRTF1(3)                               --------->RAP2.6(1)                               --------->ATERF1(1)                               <------NtERF2                               --------->RRTF1(1)                               --------->ERF1                               --------->RAP2.3(1)                               --------->ORA47(2)                               --------->DEAR4(2)                              <---------RAP2.3(1)                              <---------ORA47(2)                              ------>NtERF2                              --------->ABI4(2)                              <---------ATERF1(1)                              <---------RAP2.6(1)                              <---------DEAR3(2)                              <---------DEAR4(2)                              <---------RRTF1(1)                              <---------ERF1                             <---------DEAR3(1)                             <---------RAP2.3(2)                             <---------RAP2.3(3)                             <---------RRTF1(2)                             <---------RRTF1(3)                             --------->DEAR3(1)                            --------->ATERF1(1)                            <---------ABI4(1)                          <---------DEAR3(1)                         --------->SPL7                       <---------ARR14(2)                 --------->LBD16                           <             <---------YAB1<---------RAP2.3(1)           <---------HSFB2a(2)                 <------- -------->HVH21       --------->ATERF1(1)                --------->HSFB2a(2)         <---------GLK1(2)   gtgactgagtttgatatcaatggaggctacggcggcgccattctcttcaattgtctcttccagacaaaacttctcttcatcttcttcgattcgcgcttct  13515600                                                                                   --------->ARR14(2)                                                                                   ------->TEIL                                                                                --------->ANAC46                                                                               <---------At4g35610                                                                               <------NtERF2                                                                               <---------LBD16                                                                               --------->LBD16                                                                             --------->SPL7       ---                                       --------->TOE2(3)                     <---------DEAR3(1)  <---                      --------->LBD16  --------->YAB1              <---------HSFC1(2)            ----            <-----------GT1   --------->ARR14(2)                   --------->HSFC1(2)            <---  --------->LBD16    <---------HSFB2a(2)                      --------->HSFB2a(2)  <---------ARR14(2)  ------>NtERF2      --------->HSFB2a(2)                      <---------HSFB2a(2) <---------CCA1(2) ---------LBD16 ------>ZmHOX2a(1)     ----------->GT1   --------->ARR14(2) <-----------HVH21   ------ ---DOF2<----------DOF2       <---------ARR14(2)       <---------CCA1(2)   <---------SPL7   ---------   tctccggcttctttattcctctcccagaagagtattggcaatgttaatcgcaaattcaaatctcccagaagcctctccgtccgcgcatcttctacctcag  13515700       <----------DOF2   <---------MYB52(1) <---------HSFB2a(2) <---------------AtSPL8                                   <---------AHL20(2) --------------->AtSPL8                                   --------->ATHB12 ------>GLK1(2)                                           <---------ICU4 ------GLK1(2)                                     <---------ZAT6 ----->ARR14(2)                         <---------YAB1   <---------AHL20(2) ------ARR14(2)        <-------GAMYB <-----------------AGL3 ----->ARR10           <---------At4g35610   --------->ATHB12 >TOE2(3)             <-----------RAV1(1)   <---------AHL20(2)     ------->TEIL    <----------DOF2   attctggtactttctattgtttttctgttgccctgttgtactatatttgattagtcttatttattgctgaatctttcttctgtctctttggtgagtagtt  13515800                  --------->ZAT2                  <---------ZAT2                  <---------At4g35610                  --------->At4g35610                 <---------ARR14(2)     --------->LBD16                                   <----------              --------->ANAC46         --------->ANAC46                                   ------->TEIL             <---------LBD16           --------->ANAC58                         <---------TOE2(2)         <---------WRKY18(1)           --------->ANAC58                         ------->TEIL       <---------WOX13(1)             <---------LBD16                           <---------TOE1(2)      <---------AtLEC2              --------->ARR14(2)             <---------At4g35610    <---------ARR11(1)      <---------ANAC58            --------->HSFC1(2)<-----------HVH21        <---------ANAC55(2)    -      <---------ANAC58    <---------HSFB2a(1)       <-----------TGA1    ---------->DOF2   --------->GLK1(2)  <----------DOF2--------->ARR14(2) <---------ARR14(2)             --------->At4g35610   <---------ARR14(1)   gtgactttgcttgactacggagctggaaatgttcggagcatccgcaatgctcttcgtcatctcggcttcagcatcaaagacgtatgttttcgaatctaag  13515900                                                                                   <------NtERF2                                                                                  ------>NtERF2                                                                                 <---------LBD16                                                                                <---------LBD16                                                                              --------->ANAC46                      --------------->AGL15                                   ------->GAMYB           <---------------AtSPL3                                        <-------TEIL    <---------ANAC58  <---------------AGL15                           <------MYB83--------->LBD16    <---------ANAC46 ------>ZmHOX2a(2)                                <------MYB46(1)    <---------ANAC58 <-----------------AGL3                          --------->MYB111(1)            < -ARR10    <---------------AtSPL8                                    --------->MYB59         <------- -------->KAN4(2)   --------->GLK1(1)      --------->ATHB12          --------->MYB46(2)   --------->GLK1(2)   tttattccttgtatatgtactgatctcttattggcaaaatgaaattgattacatttgggaacttgaaatgttaggttcaaacgccgggagacattctgaa  13516000  Previous    Next  AGI:  At4g26900.1    Description:  AT-HF (ARABIDOPSIS THALIANA HISF PROTEIN). Identical to Imidazole glycerol phosphate synthase hisHF, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9SZ30;GB:O80330); similar to unnamed protein product [Vitis vinifera] (GB:CAO38924.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74695.1); similar to hypothetical protein OsI_010537 [Oryza sativa (indica cultivar-group)] (GB:EAY89304.1); contains InterPro domain Glutamine amidotransferase superfamily; (InterPro:IPR011702); contains InterPro domain Glutamine amidotransferase, class I, active site (InterPro:IPR012998); contains InterPro domain Histidine biosynthes Range:  from: 13515484    to: 13519861    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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