Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                   --------->TOE1(3)                            <----                                                   --------->TOE2(3)                            <----                                                  ----------------->AGL1                        -----                                                  ----------------->AG                          -----                                              <---------ANAC58                                  <----            ------->TEIL                      <---------ANAC58                        ===============  --------->At4g35610                      <----------DOF2                            ===============  <---------At4g35610 --------->ARR14(2)  <---------ANAC58                            ------>ZmHOX2a(1)  --------->ZAT2      <---------ARR14(2)  <---------ANAC58                ----------->GT1 <----------DOF2   aatgagctgaaatgaaactaatcgaatccaacaagtagaagatggctttcttaccttaatcgatattgaatccaaatggtttatcttcctctcttttaga  13481700    ----------->HVH21    <----------ID1   --------->DEAR3(2) --------->HVH21 --->ZmHOX2a(2) ---ZmHOX2a(2) ----->CCA1(2) ---->ARR14(2)                                                                   <--------P<--------- -----ARR14(2)                                                                   --------->ALFIN1 -----AGP1                                                                      <-------GAMYB ------- ---->ARR11(3)                                                                 <---------MYB46(3) ---->AGP1                                                    <-----------------AG <------MYB83 -----ARR11(3)                                           --------->GLK1(1)     --------->MYB55(2) ====HOX2a_HOX2a                                         <---------GLK1(1)    <---------TOE2(3)------ ===HOX2a_HOX2a <---------At5g28300            <------ZmHOX2a(1)   <----------DOF2 <------MYB46(1)---   tctgaagcgacgaatagtcactgtgagagtaagagagagagagagcataggaaacagagaaatctccaactttggttatggaggttgggaaatgggaaaa  13481800                          <---------AHL20(2)                       <---------ICU4                       <--------HAHB4                       --------->ATHB51                       --------->YAB1                       <--------ATHB1            --------->ANAC55(1)            --------->HSFB2a(2)            <---------ANAC55(2)            --------->ANAC58            --------->ANAC55(2) ----------->GT1            --------->ANAC46    <----------ID1  <---------TCP15(1)  --------->AHL20(2)  --------->PCF2      <---------ATHB12                                                      --------- --------->TCP20      --------->ICU4                                                     ----------->HVH21 <---------PCF2 --------->GLK1(1)<------ZmHOX2a(1) --------->DAG2                        --------->WRKY38(1) --------->TCP15(1)   <---------ATHB51            --------->DAG2                 <-----------GT1    = -ID1       --------->ANAC58   <---------TOE2(3) ---------->DOF2              --------->MYB52(2)    - --->DOF2  <---------LBD16--------->AHL20(2)------->GAMYB                   <---------MYB52(1)   ---- --->DAG2 <-----------GT1<---------YAB1  ----------->RAV1(1)               <----------DOF2<---------- ------>ALFIN1*TSS------------>CBF       --------->MYB52(1)         <----------DOF2  --------->ATHB12   gtgggacccattttacggaactcaataattaatgaggaaaaaacaacagcaaaaaggtgagagaccctgtcttttcgcgttatttactgatttgaccact  13481900                                                                      --------->ARR11(3)                                                                      <-----------ARR10                                                       ------>ZmHOX2a(1)                                                      --------------->AGL15                                                      <---------------AGL15                                                      --------->TOE2(3)                                                     ----------------->AGL1                                                     <-----------------AGL1 ----------->HVH21                                   ----------------->AG            --------->MYB52(1) >MYB46(3)    --------->WRKY45                       <-----------------AGL2   <---------ALFIN1 ===========================HOX2a_HOX2a           <----------DOF2     <---------ARR11(3)            < ----->ZmHOX2a(2)    ------>ZmHOX2a(1)           <---------ANAC58    --------->CCA1(1)     <------ZmHOX2a(2) ----->ZAT14  --------->WRKY38(1)                <---------ANAC58    --------->RVE1(1)    --------->AGP1 -GT1         --------->WRKY12         ----------->GT1--------->TOE1(3)  ----------->HVH21--------->ARR11(3)   gatctcacagacctcgttgactcctcatgctcatgtctgaatagttaaaaggctttccttaatgggcttaaatatctgacccagcccaaacagatcaaga  13482000           <---------ICU4          <---------ATHB12     <-----------HVH21   <-------MYC3   -------->ABF1   <-------MYC2   ------->MYC2   <-------MYC4 <---------ANAC58   ------->MYC4 <---------ANAC58   ------->MYC3 <---------ANAC46  <---------O2  <---------ANAC55(1)  --------->O2 <---------LBD16                    --------->ATHB12  <---------ANAC55(2)                ----------->RAV1(1)                           --------->AtMYB61  ======================================bZIP_DOF <---------AHL20(2)             *TSS            <----  --------->TGA1a                   ----------->HVH21                           <-----------GT1 -----  --------->ANAC55(2)        ---------->DOF2  ----------->GT1         --------->ATHB12     ----------  <---------TGA1a--------->LBD16   --------->At4g35610               <---------ATHB12<---------ALFIN1 ---------ALFIN1<---------LBD16 <---------At4g35610<------------CBF<---------At4g35610    <---------MYB52(1)   caacacgtgtcactcattccgggtttaaacatgaagcagcgacatgaatagtttattggttctctcttccgatgatttgatgaaacctcaccgctaagtg  13482100                <---------ALFIN1              ------>ZmHOX2a(1)         --------->AtMYB61      <---------ALFIN1      --------->AtMYB61      --------->DEAR3(1)                                                  <---------TOE2(3)     --------->MYB46(3)                                             --------->AHL20(2)   --------->ANAC46<---------ALFIN1 <----------DOF2                 <---------AHL20(2)            <--  --------->MYB46(3)------>ZmHOX2a(1)          <----------DOF2    --------->TOE2(3)         --------- -----ZAT18------>MYB46(1)      <---------ALFIN1                <---------YAB1             --------->MYB46(3) ---->ZAT18------>MYB83------>ZmHOX2a(1)    --------->GLK1(2)<----------DOF2             --------->WOX13(1) ----------->WRI1------>ZmHOX2a(1) <---------DAG2      --------->ANAC55(2)<---------TOE1(3)<---------ATHB12   ctcatccaccaccttcctcctcctccttcttccctcaccttttgagtttctttcttcacgtttcttttcattaattagggtttcgcattttcaatcacca  13482200                  <---------DOF5.7(2)                --------->DOF5.7(2)                <---------MYB52(1)                            <-----------RAV1(1)         <-------MYC3                                <---------ARR11(3)         ------->MYC3        --------->KAN4(2)     <---------YAB1                           ------>ZmHOX2a(1)   --------->ANAC46<---------TOE2(3)             --------->YAB1 ---------->ID1             --------->TOE2(3) -------ICU4   --------->TOE2(3)   <----------DOF2 --------->ICU4     --------->ICU4    <-----------GT1 >YAB1<---------ALFIN1     <-------TEIL<-----------GT1 ------>ZmHOX2a(2)               <-----------GT1   tcatcccaccacgttttcgttaatgtaagttcattctcttttttctacttgtcatgatcccattttgttgcaatgttcacttatgaaatttatcctttgt  13482300                                                                              <---------ANAC58                            --------->ATHB12                                  <---------ANAC58                            <--------HAHB4                               <---------AHL20(2)                  <----------DOF2                                       --------->YAB1   --------->ANAC55(1)                 <---------ANAC58                                       --------->AHL20(2)                 <---------ANAC58                                  ------>ZmHOX2a(1)     --------->ANAC46          --------->ANAC55(2)                                  --------->ARR14(2)        --------->ANAC58          <---------ANAC55(2)    <---------TOE2(3)             <---------ARR14(2)        --------->ANAC58     --------->YAB1        <---------ATHB12                    XXXXXXXXXXXXXXXXXXXX>MIR776     <---------ICU4       ------->TEIL                     --------->TOE2(3)<---------YAB1         --   atgtgaatcatcacgttttgctttgatgaatcatttagatttctaggcttacacattcaaatctaaatcctctattatatgcttgttacacaagtaatct  13482400                               <---------ANAC58                                                ------                               <---------ANAC58                                                ------        <---------YAB1         <---------ANAC55(2)    ----------->HVH21                       =======      --------->GLK1(1)        <---------ANAC46      <---------WOX13(1)               <-------TEIL     <---------ARR11(3)        <---------ANAC55(1)<---------YAB1               ------->GAMYB  ------>ZmHOX2a(1)     --------->ARR11(3)        <---------O2       <---------TOE2(3)          -------->P       <------ <---------At4g35610      <---------ICU4          <---------TOE1(3)       <------ZmHOX2a(2)   ------- ------->YAB1 --------->ALFIN1 --------->O2       <---------AtMYB61       ===========================HOX2a_HOX2a   ctcatcagatatcaatgtgtgtgtttcattaagacgtgtataagctcgagttatggttgacattttgaaattatagatcaaccccaaattcatttcctcg  13482500                            --------->MYB52(1)                            <-----------GT1                          <---------WOX13(1)                        --------->ATHB12                                      ------>ZmHOX2a(2)                        <---------ICU4                                       <------ZmHOX2a(2)                       --------->ICU4                                        --------->GLK1(1)                       <---------YAB1                                  ==============================                     --------->YAB1                                    =============HOX2a_HOX2a                     <---------ICU4                                    ==============================                    --------->ICU4                     --------->ARR14(2)   <---------ARR11(3)      -                  --------->YAB1                       <---------ARR14(2)   --------->ARR11(3)     <-    ---------->DOF2 <---------YAB1                    <------ZmHOX2a(1)==============HOX2a_HOX2a   <- --->TOE2(1)     <------ZmHOX2a(2)                    ===============================HOX2a_HOX2a  <-- --->TOE1(1)    --------->ARR14(2)                    ==============================HOX2a_HOX2a   <-- =======================HOX2a_HOX2a                 --------->LBD16    ------>ZmHOX2a(1)          --- ---LBD16       --------->ARR11(3)                 <---------LBD16--------->GLK1(1)               <-- -->LBD16       <---------ARR11(3)        <---------ARR11(3)      <---------GLK1(1)           -------   gatgtataaagaaacccagatcatcatgattaactgaatttcaagaactcaatccaggaactgagagcatttcctagggatctcaatggcaatggagaaa  13482600  Previous    Next  AGI:  At4g26760.1    Description:  microtubule associated protein (MAP65/ASE1) family protein. similar to ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1), microtubule binding [Arabidopsis thaliana] (TAIR:AT5G55230.1); similar to 65kD microtubule associated protein [Daucus carota] (GB:CAD58680.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73840.1); similar to microtubule-associated protein MAP65-1a [Nicotiana tabacum] (GB:CAC17794.1); contains InterPro domain MAP65/ASE1 (InterPro:IPR007145) Range:  from: 13478598    to: 13481814    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26770.1    Description:  phosphatidate cytidylyltransferase, putative / CDP-diglyceride synthetase, putative. similar to ATCDS1 (CDP-diacylglycerol synthase 1), phosphatidate cytidylyltransferase [Arabidopsis thaliana] (TAIR:AT1G62430.1); similar to Os10g0327300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064355.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38896.1); contains InterPro domain Phosphatidate cytidylyltransferase, eukaryota (InterPro:IPR016720); contains InterPro domain Phosphatidate cytidylyltransferase; (InterPro:IPR000374) Range:  from: 13482080    to: 13484855    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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