Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ANAC58                                        <----------DOF2                     --------->ANAC58                                    --------->ANAC58                     --------->ANAC46                                    --------->ANAC46                  --------->LBD16                                     <---------REM1(2)                 --------->ANAC46                                     <---------ZAT14                 --------->ANAC58                     ------>ZmHOX2a(1)  --------->ANAC58      ------                 --------->ANAC58                    --------------------->WRI1 --------->TOE2(3)  <-                <---------LBD16               <-----------GT1       <---------ZAT14            ------                --------->ANAC46      <------------------------ANAC81 --------->ZAT14          ------       <---------MYB59               <---------MYB52(1)             --------->ZAT14<---------AHL20(2)   gccactgagcctaatttccccgcacgaaacatttactctgtttttttgtttccctccttctacgtttctctgtacacggctttcttaaattgctcacacg  13463200                                                                        ----------->HVH21                                                                       ------->MYC3                                                                       <-------MYC3                                                                      <---------ANAC55(2)                                                                      =================bZIP_DOF                                                                      ===========================MYC_MYB                                                                      --------->ANAC55(2)                                                                      <---------O2                                                                      --------->ANAC46                                                                      --------->O2             ------                                                                      <---------TGA1a     <---------MYB52(1)                                                                      --------->TGA1a    <-------GAMYB                                                                    ------------->DYT1  <---------MYB46(3)                                                                    <-----------GT1    <---------TOE2(3) ----------->GT1                                            --------->ATHB12           <---------ANAC58 --->ANAC58                                                --------->ICU4              <---------RAP2.6(2) --------At4g35610                                         <---------YAB1   <----------DOF2    <----- --->ANAC46---------->ID1                         --------->ATHB12  <-------------DYT1 <---------ANAC58 --->ANAC58<---------CCA1(2)                   ---------->ID1 <---------WOX13(1)       <---------ANAC46   aagcagataattcgtctctctatctctctctccttgcatcattttcttcgtctcattggtattgattgattcacgtgactttgtacattgcggttaagtt  13463300                                             <-----------GT1                                     ------->GAMYB <---------ALFIN1           <-----------GT1                                    --------->ANAC46                      --------->ARR14(2)                                    --------->DEAR3(1)                    <---------ARR14(2)                           <---------ANAC46<---------HSFC1(2)             <---------GLK1(2)                         <---------ZAT14   <---------HSFB2a(1)          --------->LBD16                         --------->ZAT14   --------->HSFC1(2)          <---------ANAC58           --------->KAN4(2) <---------ZAT6--------->HSFB2a(1)         <---------ANAC46 <---------ANAC58       <---------ANAC46  --------->ARR14(2)          <---------LBD16 <---------ANAC58     <---------ANAC46    <---------ARR14(2)       <---------ANAC58 --->ARR11(3)     <-------MYC3   <---------WRKY12<-----------HVH21 <---------ANAC58<<<<<<<<<<<<<<<<<LFY ----ARR11(3)     ------->MYC3   <---------WRKY38(1)    --------->LBD16<---------ANAC58   cttccgtcttggtcattccacatgttgtgtagtgttcaacgccgaattttccttcacccgaggttagaggcttgcggatttttctgtacattggaattag  13463400                                                                           --------->TOE2(3)                                                                       <---------MYB52(1)                                                                      <-------GAMYB                                                                     <------MYB83                                                                     <---------MYB46(3)                                                                     <------MYB46(1)                                                                    <---------DEAR3(1)                                                                 <------MYB83                                                           ------>ZmHOX2a(1)                                                          --------------->AGL15                                                          <---------------AGL15                                                         <-----------------AGL1                                                  <---------CCA1(2)<---------ORA47(1)                                              <---------ARR11(3) <------MYB46(1)                                              --------->ARR11(3)--------->MYB59                                           <---------TOE1(3)    <---------AtMYB61                                           <---------TOE2(3)--------->ATHB12                                    --------->ANAC55(2)  <-----------------AGL2                 -----                                    <---------ANAC55(1)  ----------------->AGL2       <---------ANAC58                 <---------ZAT6     <---------ANAC46     ----------------->AGL1       <---------ANAC58         --------->HSFB2a(2)        <---------ANAC58     ============================================    <---------HSFC1(2)              <---------ANAC58  <----------DOF2<---------DEAR3(2)         <----    --------->HSFC1(2)     --------->YAB1 ---------->DOF2<-----------------AG   <---------MYB52(1)   cttcgatgtttcgagattagtgttagaaataatagtttgcgtgttaaagttcttatctttcctgatttggtcggttacctcagttttgtcttgttgtgag  13463500                            --------->ARR11(3)                            <---------ARR11(3)                            --------->ARR14(2)                            <---------ARR14(2)                      <----------ID1                      <XXXXXXXXXXXXXXXXXXXXMIR426              <---------------AGL15              --------------->AGL15             <-----------------AGL3             ----------------->AGL3                <---------ANAC58      <---------CCA1(2)<------ZmHOX2a(1)           <---------ANAC58          <---------AHL20(2) ------->TEIL<-----------------AGL2               *TSS               ----------->RAV1(1) ---->At4g35610      <---------TOE2(3)      <---------RVE1(1)      ------>NtERF2   --------->TOE2(3) ==============================MADS_MADS   <---------ARR11(3)     --------->ANAC46----------->GT1 -----At4g35610  --------->YAB1        ----------->GT1 <----------DOF2       --------->AHL20(2)   atgaatccatctcttgctatattaaggacaaatcttcaaatcggtgatattttgcttcttttttttctcggccacagattaaaatcgtcaaattatctga  13463600                             --------->ZAT14                          --------->At4g35610                         ------->TEIL                                                        --------                    <---------ANAC58           <---------YAB1                               <--------                    <---------ANAC58          --------->ARR11(3)                            <--------               <----------DOF2                <---------ARR11(3)            <-----------HVH21<-------         ----------->HVH21<---------At4g35610--------->YAB1               ---------->ID1    ---------        <XXXXXXXXXXXXXXXXXXXXMIR829.2     ---------->DOF2     <----------DOF2            <------ZmHOX2a(1)   tttttgatgccctgaagctttagcttgcatctgtagtcatttgtcaaagataattgaacagaggctttctatattcgtcgtcaagggtttaggagattct  13463700                                                                                     <---------ANAC58                                                                                <-------GAMYB                                                                               --------->ALFIN1                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                            <---------DEAR3(1)      <---------ANAC58                                                     --------->ALFIN1      <---------ANAC46                            --------->ANAC58       <---------ANAC58      <---------ANAC58                            --------->ANAC58       ===============MYC_MYB ->GLK1(2)                                    --------->YAB1             <---------TGA1a -GLK1(2)                                     ----------->GT1            <---------ANAC58 -ARR14(2)                            --------->LBD16                    <---------ANAC46 --ARR14(2)             --------->ATHB12--------->LBD16                 --------->SPL7         ------ >ARR14(2)             --------->ICU4 <---------LBD16                   <-------TEIL <---------ANAC58   gggttttggcgtgattttgaggggaaagattgaaactttccccgtgaatggtaagacagtgagagatgtctgggtacgtgggtgttgtcgtttctgatcc  13463800                 --------->ANAC46                 --------->ANAC58                                           --------->AHL20(2)                 --------->ANAC58                             <-----------GT1      <-------TEIL              <---------ZAT18                            <----------DOF2  <----------DOF2              --------->ZAT14                  <---------TOE2(2)          ------>ZmHOX2a(1)   <---------ZAT14                             <---------TOE1(2)   <---------MYB52(1) >ZmHOX2a(2)  <---------ZAT14                  <---------TOE2(3) <---------ZAT6   <-----------GT1   atggctacagagccagttcactcaagtcgaacttcggactctcaattccaaggtttcttctttttcactgttagtcctttatatatacatctcttgtatg  13463900                                                                   ===============HOX2a_HOX2a                                                                   ------>ZmHOX2a(2)                              <---------DEAR3(2)                  --------->GLK1(1)                             --------->ETT(1)                     ================HOX2a_HOX2a                             <---------DEAR4(1)                   <------ZmHOX2a(2)                             <---------DEAR3(1)                   <---------GLK1(1)                             <---------DREB2C(2)                 --------->ARR11(3)                             <---------ANAC46                    <---------ARR14(3)                             <---------At1g77200                 --------->ARR14(3)                           <-----------HVH21                     <---------AGP1                  <---------ZAT14                                <-----------ARR10                  --------->ZAT14                    --------->ZAT18       ------>ZmHOX2a(1)                 <---------ANAC46                 --------->DAG2 <---------ARR11(3)                 <---------REM1(1)      --------->YAB1           <---------ARR14(2)    <---------At4g35610               <---------ANAC46       --------->GLK1(2) <---------YAB1 <---------ALFIN1--------->At4g35610        --------->ATHB12  <-----------RAV1(1)   ---------->DOF2  --------->ARR14(2) ---------->DOF2   taatcttgtttgatttgtggtgtagtatgtgtcggtgaagaatcagaatggaaaggtcactattgaagatctccctcctctatttgcaaagctgaaggca  13464000               <------ZmHOX2a(1)                            --------->ANAC58             <---------TOE2(3)                              --------->ANAC58             <---------TOE1(3)                              --------->ANAC46     ----------->RAV1(1)          <---------YAB1     <---------YAB1   --------->ZAT18  --------->ANAC58            <---------ANAC58   <---------ZAT18  --------->ANAC58            <---------ANAC58    <---------TGA1a   cttagtgcaacatttaaggaagacgaaatcaagggtatgctaggggaattgggttctgatacaagcactgatgtgagttttgaagagtttctcaaggtat  13464100  Previous    Next  AGI:  At4g26700.1    Description:  ATFIM1 (Arabidopsis thaliana fimbrin 1); actin binding. Identical to Fimbrin-1 (FIM1) [Arabidopsis Thaliana] (GB:Q7G188;GB:O49182;GB:O49963;GB:Q9SZ12); similar to FIM2 (FIMBRIN-LIKE PROTEIN 2), actin binding [Arabidopsis thaliana] (TAIR:AT5G35700.1); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT2G04750.1); similar to fimbrin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G55400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38871.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61366.1); contains InterPro domain Range:  from: 13463550    to: 13467605    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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