Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->ICU4                               ------>MYB83                                          --------->YAB1                              <---------ALFIN1                                  <---------KAN4(2)                             --------->MYB46(3)                             --------->ANAC58                            --------->ANAC58                                <---------ANAC55(2)                            --------->ANAC58                                --------->ANAC58                   <-------TEIL------>MYB46(1)                              --------->ANAC46 <-------                 --------->ARR14(2)                                         --------->ANAC55(2)                 <---------GLK1(2)                    --------->TOE2(3)     --------->ANAC55(1)    --------->TOE2(3)      ------->GAMYB   --------->ZAT6                  <---------LBD16   -------- ------->GT1     <---------ARR14(2)  --------->ZAT6<-----------GT1      <-----------HVH21 <---------YAB1 ---->DOF2     ----------->ARR10--------->O2   --------->YAB1        <-------TEIL    <---------ICU4 <   agtaaatctcaatagctcagattcactaacacccacttctcactaccactaataaacctcatcttcttagattcagtcacggaataaacattatgagatg  13404000                                                                                                   --                                                               <---------ARR14(2)                 ---                                                               --------->ARR14(2)                 <--                                                              <------NtERF2                       ---                                                            <---------ANAC46                 <-------                                                      ----------->HVH21                    ------>NtERF2                                                     ------>ZmHOX2a(2)                    --------->RAP2.3(2)                                                    <------ZmHOX2a(2)                     --------->DEAR3(1)                                                   <-----------ARR10                     --------->RAP2.3(1)                                                   <---------AGP1                       --------->LBD16                                                   <---------ARR11(3)                   <---------At4g35610                                                   --------->ARR14(2)                  --------->ANAC46                                          --------->ATHB12 <---------LBD16        <---------HSFC1(2)                                         <---------YAB1--------->MYB52(1)         <---------At4g35610                                        <-----------HVH21 ------->GAMYB           --------->ZAT2  ---                               --------->ANAC58    --------->AGP1                 --------->At4g35610                               --------->ANAC46    <---------ARR14(2)             --------->HSFC1(2) --At4g35610                   --------->LBD16     --------->ARR11(3)             --------->HSFB2a(1) ->At4g35610                   --------->ANAC58   <---------CCA1(2)               <---------HSFB2a(1) ---------ICU4              --------->ZAT18       --------->At4g35610    ---------->DOF2------>NtERF2   actaattgcaatctacttacacactgaaggtgcccgaaacagtgtcattggcagatctaacggcggattcgatatcaaagccgaagcttccgccgctttc  13404100                                                                       --------->ANAC46                                      <---------ZAT2                ------>ZmHOX2a(2)                                     --------->ANAC58             --------->ARR14(2)                        <---------GLK1(1)                         <---------ARR14(2)        --------->HSFB2a(2)       --------->LBD16                 <-----------ARR10   <---------ARR11(3)   --------->GLK1(1)                     --------->At4g35610  <---------GLK1(1)    <---------ICU4--------->ANAC58      <---------ZAT2 ------->ANAC46  <---------ANAC46--------->ANAC58          <---------At4g35610 ------>HSFB2a(2)<---------ANAC58--------->ANAC46          --------->At4g35610 -------HSFB2a(2)<---------ANAC58--------->ANAC58         <-----------RAV1(1) --->ZmHOX2a(1) <------NtERF2 <---------ARR14(2)         <---------RAP2.6(2)        --------->LBD16 ---DOF2<---------HSFB2a(2)   --------->ARR14(2)        <---------At4g35610--------->ABI4(2)       -- ------>LBD16 <---------DEAR3(1)<---------LBD16 ------->TEIL  <---------At4g35610   ------>NtERF2  --   ctcgaaatctctagaggctgcgtaagaattccaatccgcaagcagagacgaacccgattgctgctgctgatctacggtgctactcccgcccatcgaaaac  13404200                                                                          <---------CCA1(1)                                                                          --------->GLK1(1)                                                                          <---------RVE1(1)                                    ---------->DOF2                      <---------ARR14(2)                                 --------->ANAC58                     ------>ZmHOX2a(2)                                 --------->ANAC58                    <------ZmHOX2a(2)                            ------>ZmHOX2a(2)                    <------NtERF2                           <------ZmHOX2a(2)                    --------->LBD16                          --------->ARR14(2)                    ------>NtERF2                          <---------ARR14(2)      <---------WOX13(1)<---------ARR14(2)        <------                          <---------ARR11(3)    --------->YAB1 <---------ATERF1(2)    <---------TOE2(3)                          --------->ARR11(3)    <--------ATHB1 --------->DEAR3(1)     <---------TOE1(3)                          --------->ARR14(3)    --------->ATHB12<---------ATERF1(1)  <---------DOF5.7(2)                          <---------ARR14(3)   <---------YAB1  --------->ATERF1(2)  ----------->HVH21                       <---------HSFB2a(2)--------->ANAC58     <---------DEAR3(1)   --------->WRKY12     ----------->HVH21 --------->HSFB2a(2)--------->ANAC58    <---------LBD16      --------->DOF5.7(2) ---->MYB46(1)        <---------ANAC46--------->ANAC58        --------->ATERF1(1) <-------GAMYB ---->MYB83           <---------LBD16 --------->ANAC58    ---------->DOF2--------->ARR14(2)   <------   catccttgtgacattttttgggtttcgggatcttcaaggaaagcaaacaatgatagaccagaacgccggcgatcggatatttttcgttgacgttttaagg  13404300                   ---------->DOF2                <---------At4g35610                <---------ZAT2                --------->At4g35610                --------->ZAT2              <------NtERF2             <---------At4g35610                                                            <--------             ------>NtERF2                                                               <------NtERF2             --------->LBD16                                                            ------>NtERF2             <------NtERF2         --------->HSFB2a(2)                                 --------->DEAR3(1)            --------->RAP2.3(2)    <---------HSFB2a(2)                                 <---------ANAC46            --------->DEAR3(1)    <---------LBD16                                 <---------DOF5.7(2)         --------->ANAC46   <---------ANAC58                                     <---------WRKY45       <---------DOF5.7(2)  --------->ANAC55(2)                        --------->ETT(2)<---------DEAR3(1)      <---------WRKY38(1)   <---------ANAC55(2)                     <---------ANAC46 ------->GAMYB --      <---------WRKY12 <---------ICU4    >>>>>>>>>TBF1--------->ARR14(2)         <---------WRKY12  <- ---TOE2(3)<---------LBD16  <---------ANAC58          <---------ARR14(2)         <---------WRKY38(1) ---TOE1(3)--------->RAP2.3(1)   <---------LBD16   *TSS          ----------->HVH21--------->MYB52(1)   ttttttggtaaacgccgcagctaaagaattacttactcgggaagaagaagacgggagaaccgatgctgtaacgtcgatagaagtcaacggcgtcgtttct  13404400                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                                 --------->AHL20(2)                                                          <---------ANAC58                                                          <---------ANAC58            <-----------GT1 --------->LBD16       <---------HSFC1(2)          <---------DAG2   --------->LBD16        --------->HSFC1(2) -MYB52(1)<----------DOF2 --------->LBD16         --------->HSFB2a(1)                         <------ ------->ANAC55(2)       <---------LBD16          <---------HSFB2a(1)            ----------->GT1 --------ANAC55(2) <---------AHL20(2) ----------->GT1     <---------ANAC46       --------->YAB1   taagtaacttagctttaccatttttttccccgagtaaaacgagtaatttggaaacttcttgagtgaatttaaaaatactggtatggtaattcccttatta  13404500                                       --------->ANAC46               <-----------ARR10       --------->ANAC58                 --------->AHL20(2)     --------->TOE2(3)                 --------->ANAC58                <---------AHL20(2)     --------->TOE1(3)     --------->CCA1(2)                 <---------YAB1  --------->ANAC58        <---------ARR14(2)               <-----------GT1  --------->ANAC46        --------->ARR14(2)            --------->ARR14(2) <---------AHL20(2)  --------->ANAC58        <---------ARR11(3)       <-----------GT1     --------->AHL20(2) ---YAB1---------->DOF2   --------->ARR11(3) <---------MYB46(3)  ----------->GT1                  ---   atccaagccttaaagcagaactcatcaagatatgtagttccaagcagttgttgttacagatttacaatagaaaataaataatctcacagccaaaatactt  13404600                               <---------ICU4                            --------->YAB1                         --------->YAB1                        <---------YAB1          ----------->HVH21<---------YAB1      --------->GLK1(1)                           <---------O2     <-----------HVH21 --------->ARR11(3)      <---------GLK1(1)                           <---------ANAC46    ------->GAMYB      <---------ARR11(3)--------->At4g35610                            <---------ANAC46   --------->ZAT6     --------->YAB1     --------->ZAT2         <-------TEIL           <------NtERF2 ------>TOE2(3) <------ZmHOX2a(1)<----------DOF2   ---------->DOF2                   <---------DEAR3(1)   cattaacagtcagtgacaggacaaatatcataatactttcaagagctggatttcaaagaccagaggctcgttcgcatgcgatagaaggctgcgtcgtggt  13404700                                                                                   ==================                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                  --------->At4g35610                                                                                  --------->CCA1(2)                                                                                  ===================                                                                                 --------->AGP1                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                                                                                 <---------ARR11(3)                                                                                 --------->ARR11(3)                                          --------->ANAC55(2)                    <---------AGP1                                          <---------ANAC55(2)                    <-----------ARR10                                         <-------TEIL                           --------->RVE1(1)                             --------->ATHB12                                  ----------->ARR10  ---                            <------ZmHOX2a(2)                                ---------->DOF2    <----                           <---------ARR11(3)           <-------TEIL      ----------->GT1      <-----                           --------->ARR11(3)------->TEIL          --------->At4g35610         ------   ccaaactgcatccacaaacacatatgagagatcatttgagacatacgtatgtagcaagttcattgtggaagatgaagagtaaagatctgactacctcctc  13404800                                                       --------->ANAC58                                                       --------->ANAC58       <----------DOF2                                 --------->ANAC46 --------->ARR14(2)                                   XXXXXXXXXXXXXXXXXXXXXXX>MIR836 <---------ARR14(2)                                  <---------ALFIN1            <---------MYB52(1) =HOX2a_HOX2a                                       <---------SPL7    --------->LBD16 =HOX2a_HOX2a                                     --------------->AtSPL3 ---------->DOF2 ------>LBD16             ------->TEIL           --------->ZAT18     --------->ANAC58 -----LBD16              <-----------GT1         --------->ZAT14     --------->ANAC58        -------- ----LBD16            --------------->AtSPL8     <---------ZAT18     --------->ANAC46   <---------ANAC58 >ZmHOX2a(1)     <---------ANAC46                <---------ZAT14    <---------LBD16     <---------ANAC58   ggggattggcttcaatgtctcgtttatgtaccctactgatggaggtatcagtgccctacgcttcccttcatccgcaaaagaccattatgtgcgagtcatt  13404900  Previous    Next  AGI:  At4g26550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45187.1); contains InterPro domain SFT2-like (InterPro:IPR011691) Range:  from: 13402521    to: 13404351    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26555.1    Description:  immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein. similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT4G19830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45186.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 13404471    to: 13406251    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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