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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ANAC58
<---------
DAG2
--------->
ANAC46
<----------
DOF2
<---------
ALFIN1
--------->
YAB1
--------->
ANAC58
--------->
MYB46(3)
----------->
GT1
<-----------
GT1
--------->
ANAC58
------>
MYB46(1)
---------->
DOF2
--------->
TOE2(3)
--------->
ANAC46
------>
MYB83
<-------
---------
WRKY18(1)
--------->
AHL20(2)
<---------
ANAC58
--------->
ANAC46
<---------
ICU4
tttgaccaaaaaaaaaaagagattaaaaacaatgttaacttttcgtccaagtagacaccacataccaagttaccaacaacacttcacatttgatcatttt
13217300
<---------
YAB1
--------->
ICU4
<---------
YAB1
--------->
ATHB12
<--------
ATHB1
--------->
YAB1
<-------
<---------
ICU4
<------
ZmHOX2a(2)
--------
----------->
GT1
<---------
ATHB12
------->
GAMYB
<--------
<-------
MYC3
--------->
ICU4
<---------
MYB52(2)
---------
------>
ZmHOX2a(2)
<---------
YAB1
--------->
MYB46(3)
---------
--------->
ARR11(3)
--------->
CCA1(1)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
ARR11(3)
--------->
TOE2(3)
<---------
ICU4
--------->
AHL20(2)
<---------
YAB1
--
YAB1
------->
MYC3
--------->
RVE1(1)
<---------
AHL20(2)
<-----------
GT1
agttgatctcttccatccatgtggtattaatctaaaatatccaatgattatgacatcttattttattttggcaacgatcgagtattaccattaattaaaa
13217400
----------->
GT1
--
AHL20(2)
--------->
ARR14(2)
->
AHL20(2)
<-----------------
AGL1
---------->
DOF2
-
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
>
YAB1
--------->
AHL20(2)
<---------
ATHB12
<--
>
AHL20(2)
<---------
AHL20(2)
<<<<<<<<<
ARR2
----------->
GT1
tcaacatgctattaaataatccaaataggcaaaaacttcacaatcaaaagagaagaagaccattcgtcgaagaaaattactcacaagagtataaaactat
13217500
--------->
YAB1
----------->
GT1
<------
MYB46(1)
----------->
GT1
--------->
ARR11(3)
<----
<---------
MYB46(3)
---------->
DOF2
<-------
<------
MYB83
<--------
ATHB1
---------
<---------
AtMYB61
------>
ZmHOX2a(2)
---------->
DOF2
---
--------->
TOE2(3)
--------->
ALFIN1
<---------
ATHB12
<---------
YAB1
<---------
AHL20(2)
-------
AHL20(2)
<---------
YAB1
<---------
O2
--------->
ICU4
--------->
ARR11(3)
--------->
AHL20(2)
atatatgatcagcctattcttaatgtgaacattgagaagtggggaggttaaaatgcaatgattttgatccaaagttattgttgacaaagacaattaaaga
13217600
*
TSS
---------
<---------
HSFC1(2)
<---------
HSFB2a(1)
<---------
MYB46(3)
<---------
DEAR3(2)
--------->
HSFB2a(1)
--------->
HSFC1(2)
<---------
DEAR3(1)
------------>
AtMYB77
------->
GAMYB
<---------
DEAR3(1)
--------->
MYB46(3)
<---------
ETT(2)
<---------
DOF5.7(2)
--------->
DEAR3(1)
<---------
WRKY38(1)
<-----------
HVH21
<---------
WRKY12
<---------
O2
--------->
ANAC58
--------->
At4g35610
<-------
TEIL
-----------------
WRI1
--------->
ANAC58
--------->
ATHB12
--------->
ETT(2)
--
TOE2(3)
--------->
WRKY18(1)
<---------
ANAC58
<-----------
GT1
--------->
ANAC46
->
DOF2
---------->
DOF2
<------
ZmHOX2a(1)
<---------
ANAC58
<----------
DOF2
--------->
REM1(1)
-------->
GT1
--------->
CCA1(2)
<---------
WRKY45
---------->
ID1
<---------
ICU4
--------->
O2
aggaaaattcaaaggagagatgagtcaaggacaagtcaacgaccatttcgtcttcgtcttcttctttatactcattagctacacgacgtcgac
ggttcgt
13217700
------>
ZmHOX2a(2)
--------->
GLK1(1)
==============
<----------
DOF2
<---------
At4g35610
--------->
ARR11(3)
<---------
ARR11(3)
<-------
MYC3
<---------
ARR11(3)
<---------
DAG2
------>
ZmHOX2a(2)
------->
MYC2
<---------
MYB46(3)
------>
ZmHOX2a(1)
<---------
GLK1(1)
------->
MYC3
<---------
DEAR3(2)
============================
HOX2a_HOX2a
<-------
MYC2
---------->
ID1
--------
>
ARR14(2)
<----------
DOF2
----------->
HVH21
<---------
AtLEC2
<-----------
RAV1(1)
cattcttcctctaagctttatctttctgatctctgaccttgtgtctctgtgcatgtgtgtttatctgctactgtgttttgtcggtttgatctccaaaaac
13217800
<---------
At4g35610
--------->
HSFC1(2)
<---------
HSFC1(2)
------>
ZmHOX2a(1)
<----------
DOF2
<--
==================
HOX2a_HOX2a
<---------
ALFIN1
<---------
GLK1(2)
<----------
DOF2
-->
DOF2
<------
ZmHOX2a(1)
----------->
RAV1(2)
--------->
WOX13(1)
<-----------
GT1
---
cagac
atgaacagaggaagcttatgccctaatcccatctgtctccctcctcttgagcaatccatctccaaattctt
gtaactctctttctctttttctct
13217900
--------->
AHL20(2)
<---------
AHL20(2)
<-----
<----------
DOF2
<------
MYB83
--------->
ARR14(2)
<------
MYB46(1)
<---------
ARR14(2)
--------->
ATHB12
<---------
MYB46(3)
<---------
GLK1(2)
--------->
ZAT18
<---------
ICU4
<---------
YAB1
-------
ANAC46
<---------
ZAT18
--------->
ICU4
<---------
YAB1
<---------
TOE2(3)
------>
ALFIN1
--------->
ICU4
--------->
TOE2(3)
<------------------------
ANAC81
---------
gtgtggattctttttaaatgtcaatattagggcattatccataaatgtttctagtgattactctgtttttattcttcagatttagatttatagttggtga
13218000
-------
-------
<------
-------
<---------
ZAT14
<-------
--------->
ZAT14
--------->
ARR14(2)
--------
<---------
ZAT14
<---------
ARR14(2)
<-------
--------->
ZAT14
<------
ZmHOX2a(1)
<---------
At5g28300
----
MYB46(3)
--------->
YAB1
--------->
HSFB2a(2)
<----------
DOF2
-->
GT1
<---------
AHL20(2)
--------->
ZAT18
<---------
HSFB2a(2)
--------->
ZAT14
-----------
ttactctgttttattctgcaaatcagagttcactgttctctgtttctaggatttgttttcataccacaagtgattctacagtcttttactgtgtaatcat
13218100
<---------
ZAT18
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR14(3)
<------
ZmHOX2a(1)
<---------
ARR11(3)
--------->
MYB59
--------->
ARR14(3)
-->
ATHB12
<---------
ARR14(2)
->
ATHB1
--------->
ARR14(2)
---
ICU4
<---------
GLK1(1)
-->
YAB1
--------->
GLK1(1)
--
ATHB12
<---------
TOE2(3)
<---------
ZAT14
->
ICU4
---------->
DOF2
--------->
ZAT18
--
YAB1
----------->
HVH21
----------->
GT1
--------->
AGP1
------
->
ATHB5
<---------
AtLEC2
--------->
YAB1
--------->
ALFIN1
----------->
ARR10
tgttaggaattgaaattgtttgaatggagttttctgacattgaaaattggattag
aacacagagtggaacgtttaaagatggagatcttcgagtgaacaa
13218200
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AGI:
At4g26070.1
Description:
MEK1 (mitogen-activated protein kinase kinase 1); MAP kinase kinase/ kinase. Identical to Mitogen-activated protein kinase kinase 1 (MKK1) [Arabidopsis Thaliana] (GB:Q94A06;GB:O04440;GB:O04661); similar to ATMKK2 (MAP KINASE KINASE 2), MAP kinase kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G29810.1); similar to double MYC-tagged mitogen activated protein kinase kinase 1 [synthetic construct] (GB:ABF55661.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271)
Range:
from: 13217694
to: 13219871
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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