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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<---------
GLK1(2)
-------->
HAHB4
<---------
ATHB12
----------->
GT1
--------->
AHL20(2)
<---------
ANAC55(2)
<---------
AHL20(2)
--------------->
AGL15
--------->
YAB1
----------------->
AGL1
----------->
GT1
<---------
YAB1
----------------->
AG
--------->
DAG2
------->
GAMYB
--------->
AtMYB61
--------->
AHL20(2)
<---------------
AGL15
----------->
GT1
--------->
MYB46(3)
->
GT1
<---------
YAB1
--------->
ANAC46
---------->
DOF2
--------->
MYB52(1)
acgatataataaatgattctcaacttacacatcccaaataagtaaaaacaataaagtgataaactaattttgaaataacagccaaatactaccaaaacaa
13205100
--------->
AHL20(1)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
CCA1(2)
--------->
YAB1
<---------
GLK1(1)
<---------
YAB1
--------->
ARR11(3)
<-----
<---------
RVE1(1)
<---------
ARR11(3)
<------
--------->
AHL20(2)
<---------
CCA1(1)
<---------
YAB1
<---------
ZAT14
--------->
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
YAB1
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
--------->
ARR11(3)
--------->
ARR11(3)
--------->
ZAT14
<---------
TOE2(3)
----------->
GT1
<---------
GLK1(2)
<---------
ARR11(3)
<---------
ZAT18
-
atagaggttttccaaataaaaatatagaaaattacaaatttgaagattttttttatagtaatagatattaaaattagatatcagtccacaaaaatattca
13205200
<---------
TOE1(3)
------>
ZmHOX2a(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
TOE2(3)
--------->
ZAT14
----------->
TBP
<----------
DOF2
--------------->
AGL15
<-----------
GT1
<---------
AHL20(2)
<---------
At5g28300
<
----
ICU4
<----------
DOF2
<---------
DAG2
<---------
AHL20(2)
<-----------
GT1
-
-
TEIL
--------->
AHL20(2)
<---------
ICU4
<----------
DOF2
------------>
CBF
<---------
TOE2(3)
---------------->
AG
<----------
DOF2
<----------
DOF2
--------->
AHL20(2)
<-----------
GT1
---
tttccttatatgtataaattagtttctttcttttaaaaatttccactttagtcttttttatttaatataaaaaccaatttacccttttattaaggtatac
13205300
--------->
AtLEC2
--------->
CCA1(2)
----------->
TBP
---------->
DOF2
--------->
GLK1(2)
--------->
ARR11(3)
--------->
YAB1
<---------
ARR11(3)
<---------
AHL20(2)
<---------
ARR14(2)
<---------
AHL20(2)
--------->
ARR11(1)
--------->
At5g28300
--------->
AHL20(2)
--------->
ARR14(2)
--------->
ANAC46
<---------
At5g28300
---------
ATHB12
--------->
AHL20(2)
--------->
ANAC58
--------->
YAB1
-------->
AHL20(2)
----------->
ARR10
--------->
ANAC58
------->
TEIL
<-----------
GT1
------>
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
<-----------
GT1
taataaataataatctaatataaatagatagatatgcaaagtatttaaaacacacgctcccttgtactatgaatcacagtgattttcccatccaaataaa
13205400
<---------
MYB52(1)
<-------
GAMYB
<-----------
GT1
--------->
MYB52(2)
<---------
CCA1(2)
<-------
TEIL
<---------
AHL20(2)
------------>
CBF
--------->
AHL20(2)
<-----------
GT1
<---------
YAB1
<---------
AHL20(2)
<-------
---------->
DOF2
----------->
GT1
<---------
MYB46(3)
--------->
AtLEC2
<----------
DOF2
ctcaagttcgataaatcaccagtctaaaatggtttcatcaatgttcgttacttctaacaacaaaaaccatgctaatttatatccatcttctttttttact
13205500
------>
MYB46(1)
------>
MYB83
-------->
P
--------->
MYB46(3)
<---------
TOE1(2)
<------------
CBF
<----------
DOF2
--------->
YAB1
<---------
TOE2(2)
--------->
ATHB12
--------------->
AGL15
----
GT1
<---------
YAB1
<-----------
GT1
<----------
DOF2
<-------
agttcccatgtttcaaaagtttcttcatcttcattgagaaccaac
atggtttctcctttcagtatgcctttcatagctcaaactagtggttttgttaact
13205600
<--------
------>
ZmHOX2a(2)
--------->
ARR11(3)
--------->
YAB1
-------->
HAHB4
--------->
YAB1
--------->
ICU4
----------->
GT1
<---------
YAB1
<---------
YAB1
--------->
AtMYB61
--------->
ANAC58
--------->
YAB1
--------->
MYB46(3)
--------->
ANAC46
<---------
ICU4
--------->
WOX13(1)
--------->
DAG2
--------->
ANAC58
--------->
ICU4
--------->
ZAT6
--------->
DAG2
---------->
DOF2
--------->
YAB1
----
GT1
<-----------
GT1
---------->
DOF2
<---------
ETT(1)
<---------
YAB1
<
attctcaagtttttatcactcaaaccatcgcaaaaaggtatcatgctcttattccgacaagcaatatggtcattgtccaaaatgataatgatcgtgtcaa
13205700
--------->
ARR11(3)
--------->
LBD16
--------->
ANAC46
------->
GAMYB
--------->
AtMYB61
--------->
YAB1
--------->
MYB46(3)
<-----------
HVH21
---
HVH21
--------->
MYB46(3)
<-----------
GT1
<---------
YAB1
--------->
TOE2(3)
---------
MYB52(1)
<---------
ZAT6
<---------
ATHB12
--------->
TOE1(3)
<
ccgtttcatgacttcttatccaccaattttgaaatctacagttaaccccccaaatgattttgataaacagtatgaaaccttcacacctaaacccatcgat
13205800
<
-
<
-
<
<-
<-
<--
<--
<---
<---------
ARR11(3)
<---
--------->
TGA2(2)
<---
<-----------
TGA1
<---
<---------
bZIP60(1)
<----
--------->
bZIP60(1)
--------->
ANAC46
<----
--------->
TGA2(1)
--------->
LBD16
<----
--------->
ANAC58
--------->
ETT(2)
------>
ZmHOX2a(1)
<---------
AHL20(2)
--------->
ANAC58
<---------
ETT(2)
<-----------
GT1
--------->
YAB1
--------->
AHL20(2)
--------->
ANAC46
------->
TEIL
--------->
ARR11(3)
<---------
YAB1
<-------
TEIL
<-----
----------
DOF2
<---------
AtLEC2
<---------
AHL20(1)
--------->
ZAT6
<---------
ARR11(3)
<---
ttcttttgttcgcaacaagactatgcatgtcgtcagcatttggatatattttcatcctccccaaaacactatcatgagcaatatgttcataaaaatggtc
13205900
<---------
CCA1(2)
--------->
ARR11(3)
--------->
AHL20(1)
<---------
ARR11(3)
----------->
GT1
<------
MYB83
<------
MYB46(1)
<---------
DEAR3(2)
---------
DEAR3(1)
-------->
MYB55(2)
---------
DEAR4(1)
-------->
MYB46(2)
---------
MYB46(3)
--------
ORA47(1)
--------
MYB55(1)
<------
MYB46(1)
---------
HVH21
<------
MYB83
-----
GAMYB
--------->
ARR11(3)
<--------
P
------
DEAR3(2)
------->
GAMYB
--------->
MYB55(2)
---
MYB46(1)
------>
MYB46(1)
--------->
MYB111(2)
---
MYB83
<---------
AHL20(1)
--------->
MYB52(2)
<-----
------
MYB46(3)
------>
MYB83
<---------
MYB46(3)
<-------
-----
DREB2C(2)
----------->
RAV1(1)
<---------
AtMYB61
<-------
-----
DEAR3(1)
--------->
MYB52(1)
----------->
TGA1
--------->
ALFIN1
<-------
-----
MYB46(3)
--------->
AtMYB61
--------->
YAB1
<---------
DEAR3(1)
<---------
ANAC58
----
ORA47(1)
--------->
MYB46(3)
<-------
TEIL
---------->
DOF2
<---------
ANAC58
------
SPL7
<---------
ARR11(3)
------>
ZmHOX2a(1)
<---------
YAB1
<-------
GAMYB
----------->
RAV1(2)
ggtcggtgaaatatatctgtaaaccaacagaggtccttgaagaaattcatgacgaaatcgattatgaaaaagacggtggttggatatatagcctgccgtt
13206000
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AGI:
At4g26030.1
Description:
transcription factor. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G15740.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087)
Range:
from: 13205546
to: 13206208
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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