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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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           <---------GLK1(2)
          -------->HAHB4
         <---------ATHB12           ----------->GT1
      --------->AHL20(2)            <---------ANAC55(2)
      <---------AHL20(2)     --------------->AGL15
   --------->YAB1            ----------------->AGL1 ----------->GT1
  <---------YAB1             ----------------->AG--------->DAG2            ------->GAMYB--------->AtMYB61
 --------->AHL20(2)          <---------------AGL15----------->GT1         --------->MYB46(3)
->GT1<---------YAB1      --------->ANAC46       ---------->DOF2         --------->MYB52(1)
 
acgatataataaatgattctcaacttacacatcccaaataagtaaaaacaataaagtgataaactaattttgaaataacagccaaatactaccaaaacaa  13205100
                                                                                         --------->AHL20(1)
                                                                                         --------->ARR11(3)
                                                                                         <---------ARR11(3)
                                                                          --------->CCA1(2)
                                                    --------->YAB1        <---------GLK1(1)
                                                <---------YAB1           --------->ARR11(3)   <-----
                                          <---------RVE1(1)              <---------ARR11(3)  <------
                --------->AHL20(2)        <---------CCA1(1)       <---------YAB1 <---------ZAT14
              --------->AHL20(2)         <---------ARR11(3)      <---------AHL20(2)      <---------AHL20(1)
             --------->YAB1 <-----------GT1 <---------AHL20(2)   --------->AHL20(2)     --------->YAB1
            --------->AHL20(2)           --------->ARR11(3) --------->ARR11(3)   --------->ZAT14
<---------TOE2(3)    ----------->GT1     <---------GLK1(2)  <---------ARR11(3)   <---------ZAT18   -
 
atagaggttttccaaataaaaatatagaaaattacaaatttgaagattttttttatagtaatagatattaaaattagatatcagtccacaaaaatattca  13205200
                                                                                        <---------TOE1(3)
 ------>ZmHOX2a(1)                                    <---------AHL20(2)          --------->AHL20(2)
--------->TOE2(3)                          --------->ZAT14     ----------->TBP  <----------DOF2
--------------->AGL15               <-----------GT1  <---------AHL20(2)     <---------At5g28300    <
----ICU4                  <----------DOF2 <---------DAG2  <---------AHL20(2)<-----------GT1        -
-TEIL      --------->AHL20(2)    <---------ICU4  <----------DOF2     ------------>CBF   <---------TOE2(3)
---------------->AG   <----------DOF2     <----------DOF2--------->AHL20(2)<-----------GT1       ---
 
tttccttatatgtataaattagtttctttcttttaaaaatttccactttagtcttttttatttaatataaaaaccaatttacccttttattaaggtatac  13205300
                              --------->AtLEC2
                            --------->CCA1(2)
                ----------->TBP  ---------->DOF2
        --------->GLK1(2)  --------->ARR11(3)
    --------->YAB1         <---------ARR11(3)
   <---------AHL20(2)      <---------ARR14(2)
<---------AHL20(2)         --------->ARR11(1)                             --------->At5g28300
--------->AHL20(2)         --------->ARR14(2)     --------->ANAC46     <---------At5g28300
---------ATHB12 --------->AHL20(2)                --------->ANAC58    --------->YAB1
-------->AHL20(2)        ----------->ARR10        --------->ANAC58  ------->TEIL <-----------GT1
------>YAB1     <---------AHL20(2)       <---------AHL20(2)      <---------YAB1 <-----------GT1
 
taataaataataatctaatataaatagatagatatgcaaagtatttaaaacacacgctcccttgtactatgaatcacagtgattttcccatccaaataaa  13205400
                                           <---------MYB52(1)
                                          <-------GAMYB                     <-----------GT1
                                         --------->MYB52(2)                <---------CCA1(2)
                                        <-------TEIL                     <---------AHL20(2)
                                 ------------>CBF                        --------->AHL20(2)
            <-----------GT1      <---------YAB1                         <---------AHL20(2)  <-------
        ---------->DOF2   ----------->GT1<---------MYB46(3)      --------->AtLEC2     <----------DOF2
 
ctcaagttcgataaatcaccagtctaaaatggtttcatcaatgttcgttacttctaacaacaaaaaccatgctaatttatatccatcttctttttttact  13205500
                                       ------>MYB46(1)
                                       ------>MYB83
                                       -------->P
                                    --------->MYB46(3)
   <---------TOE1(2)        <------------CBF        <----------DOF2--------->YAB1
   <---------TOE2(2)       --------->ATHB12      --------------->AGL15
----GT1                   <---------YAB1        <-----------GT1 <----------DOF2             <-------
 
agttcccatgtttcaaaagtttcttcatcttcattgagaaccaacatggtttctcctttcagtatgcctttcatagctcaaactagtggttttgttaact  13205600
                                                                                           <--------
                                                                                        ------>ZmHOX2a(2)
                                                                                      --------->ARR11(3)
                                                                                     --------->YAB1
                                                                                     -------->HAHB4
                                     --------->YAB1                                 --------->ICU4
                                ----------->GT1                  <---------YAB1     <---------YAB1
                     --------->AtMYB61                 --------->ANAC58           --------->YAB1
                    --------->MYB46(3)                 --------->ANAC46           <---------ICU4
             --------->WOX13(1)--------->DAG2          --------->ANAC58          --------->ICU4
            --------->ZAT6    --------->DAG2         ---------->DOF2           --------->YAB1
----GT1  <-----------GT1     ---------->DOF2      <---------ETT(1)            <---------YAB1       <
 
attctcaagtttttatcactcaaaccatcgcaaaaaggtatcatgctcttattccgacaagcaatatggtcattgtccaaaatgataatgatcgtgtcaa  13205700
                                                    --------->ARR11(3)
                                             --------->LBD16
                                           --------->ANAC46
                                          ------->GAMYB                           --------->AtMYB61
  --------->YAB1                         --------->MYB46(3)                <-----------HVH21
---HVH21       --------->MYB46(3)      <-----------GT1  <---------YAB1    --------->TOE2(3)
---------MYB52(1)                  <---------ZAT6 <---------ATHB12        --------->TOE1(3)        <
 
ccgtttcatgacttcttatccaccaattttgaaatctacagttaaccccccaaatgattttgataaacagtatgaaaccttcacacctaaacccatcgat  13205800
                                                                                                   <
                                                                                                   -
                                                                                                   <
                                                                                                   -
                                                                                                   <
                                                                                                  <-
                                                                                                  <-
                                                                                                 <--
                                                                                                 <--
                                                                                                <---
                                         <---------ARR11(3)                                     <---
                            --------->TGA2(2)                                                   <---
                           <-----------TGA1                                                     <---
                          <---------bZIP60(1)                                                  <----
                          --------->bZIP60(1)            --------->ANAC46                      <----
                          --------->TGA2(1)             --------->LBD16                        <----
      --------->ANAC58    --------->ETT(2)           ------>ZmHOX2a(1)                 <---------AHL20(2)
      --------->ANAC58    <---------ETT(2)    <-----------GT1       --------->YAB1     --------->AHL20(2)
      --------->ANAC46------->TEIL       --------->ARR11(3)        <---------YAB1 <-------TEIL<-----
----------DOF2       <---------AtLEC2    <---------AHL20(1)   --------->ZAT6  <---------ARR11(3)<---
 
ttcttttgttcgcaacaagactatgcatgtcgtcagcatttggatatattttcatcctccccaaaacactatcatgagcaatatgttcataaaaatggtc  13205900
         <---------CCA1(2)
        --------->ARR11(3)
        --------->AHL20(1)
        <---------ARR11(3)
----------->GT1
<------MYB83
<------MYB46(1)
<---------DEAR3(2)
---------DEAR3(1)
-------->MYB55(2)
---------DEAR4(1)
-------->MYB46(2)
---------MYB46(3)
--------ORA47(1)
--------MYB55(1)                                                             <------MYB46(1)
---------HVH21                                                               <------MYB83
-----GAMYB--------->ARR11(3)                                               <--------P
------DEAR3(2)          ------->GAMYB                                    --------->MYB55(2)
---MYB46(1)           ------>MYB46(1)                                    --------->MYB111(2)
---MYB83<---------AHL20(1)                                               --------->MYB52(2)   <-----
------MYB46(3)        ------>MYB83                                       <---------MYB46(3) <-------
-----DREB2C(2)       ----------->RAV1(1)                                <---------AtMYB61   <-------
-----DEAR3(1)        --------->MYB52(1)      ----------->TGA1           --------->ALFIN1    <-------
-----MYB46(3)       --------->AtMYB61      --------->YAB1            <---------DEAR3(1)<---------ANAC58
----ORA47(1)       --------->MYB46(3)     <-------TEIL          ---------->DOF2        <---------ANAC58
------SPL7<---------ARR11(3)    ------>ZmHOX2a(1)           <---------YAB1<-------GAMYB----------->RAV1(2)
 
ggtcggtgaaatatatctgtaaaccaacagaggtccttgaagaaattcatgacgaaatcgattatgaaaaagacggtggttggatatatagcctgccgtt  13206000
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AGI:  At4g26030.1   
Description:  transcription factor. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G15740.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087)
Range:  from: 13205546    to: 13206208    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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