Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------ZAT6                                                                                      <---------At5g28300                                                                                    <---------YAB1                                                                                  --------->ATHB51                                                                                  <---------ICU4                                                                                  <--------HAHB4       --------->ANAC58                                                           --------->YAB1       --------->ANAC58                   <---------ZAT14                        --------->ICU4       --------->ANAC46                   --------->ZAT14                        <---------YAB1 -------TEIL                  --------->YAB1                                ------->GAMYB ---->ANAC58                 <---------YAB1                   <---------CCA1(2)--------->YAB1 ---->ANAC46                 --------->ICU4          ----------->HVH21     --------->MYB46(3)     <-- ---->ANAC58                 <---------ATHB12        --------->bZIP60(2)<---------WRKY38(1)      ----   gctacattgacgcaaaatcacatttgatgcaatgataagagaactatagtgagccatgacacttgtatcactgatcaacgaccataattactgtgaatga  13160100                                                              ------>ZmHOX2a(2)                      <---------YAB1                         <------ZmHOX2a(2)                  <---------ZAT2                            <---------ARR11(3)     --------->At4g35610                                    --------->ARR11(3)     <---------At4g35610<---------GLK1(2)                 --------->ANAC58 -------ATHB12   --------->ANAC58                         --------->ANAC58 --->TEIL        --------->ANAC58                      <-------TEIL               <---------HSFB2a(2)   atcattcatctgaaaatgcaagctctgattctcacacagtattgccaatttcaaagatgcacgatctcaaactgtaagcttgttcgagcaagagagactt  13160200                    <------MYB46(1)                        <------ZmHOX2a(1)                    <------MYB83                       --------->LBD16                  <--------P                         <------NtERF2               <---------AtMYB61                     <---------LBD16              <------NtERF2                         ------>NtERF2            <---------ANAC46                        --------->MYB52(1)            <---------DEAR3(1)                     <---------ALFIN1                      <---------SPL7           <---------LBD16                         --------->DEAR3(1)          --------->TOE1(3)   <-         --------->ANAC46                       --------->ANAC58 --------->At4g35610   --------->ZAT2      <---------ARR14(2)<----------ARF1         --------->ANAC58 <---------At4g35610   --------->At4g35610 <---------LBD16  --------->ALFIN1              --------->ANAC46 <---------LBD16----------->HVH21  <-   atacctggaatacggcggaggtaggggagacaagagaaaacgaagactgaacgccaccggaggaatcagcggagagagatacctgaacgagcttacgctg  13160300                                                                  ------>NtERF2                                                                 --------->DEAR3(1)                                                                --------->ATERF1(1)                                                                <------NtERF2                                                                --------->RAP2.3(1)                                                               <---------ATERF1(1)                                                               ------>NtERF2                                                               --------->ABI4(1)                                                              --------->DEAR3(1)                                                              --------->RAP2.6(2)                                                              --------->RRTF1(3)                                                              <---------ALFIN1                                                              --------->RAP2.3(2)                                                              --------->RAP2.3(3)                                                              --------->RRTF1(2)                                                             --------->ORA47(2)                                                             --------->RAP2.3(1)                                                             --------->RRTF1(1)                                                             --------->DEAR4(2)                                                             --------->ERF1                                                             --------->ATERF1(1)                                                            ------>NtERF2                                                            <---------ATERF1(1)                                                          ------->MYC2                                                          <-------MYC2                                                          ------->PIF5                                                          <-------PIF5                                                          <-------MYC3                                             <---------ANAC58--------->RAP2.6(1)                --------->At4g35610     <-----------RAV1(1)--------->ANAC46                <---------At4g35610   <---------ANAC58    ------->MYC3                     --------->KAN4(2)      <------MYB46(1)                 <---------ANAC46   --------->ANAC46                --------->ARR14(2)      <------MYB83            --------->ARR11(3)         --------->ANAC58                <---------ARR14(2)     <---------TOE1(2)        <---------ARR11(3)    <--------------OsCBT            ----------->GT1     <---------TOE2(2)   <-------TEIL <---------ANAC58   --------->ANAC58          ------->TEIL --------ZAT2  --------->GLK1(2)    ------>ZmHOX2a(1)  <---------ALFIN1     <---------ANAC58 --------At4g35610      --------->CCA1(2)    <---------ANAC58<------NtERF2  <---------ANAC58   gagctcgtaggtagaagaagctgaagattcaagttctccttcgtgttgcttcgcgctccacgcgccgcctccattcttgcatacgaatgtgaatactccc  13160400                                                  --------->DAG2                                                 ---------->DOF2                                             --------->LBD16                                            <---------HSFC1(1)                                     --                                            <---------HSFB2a(2)                               -------                                            --------->HSFB2a(2)                               -------                        <---------DEAR3(1)  --------->HSFC1(1)                            <---------YAB1             <---------At4g35610           <---------LBD16                              --------->YAB1             ----------->GT1            --------->GLK1(1)          <---------MYB46(3)  --------->ICU4             --------->At4g35610        <---------GLK1(1)  <------ZmHOX2a(2)  --------->AHL20(2)-----   atcttcttcaatgtctgctaaaatcgatggcgatagtgagagatttctggaaaaagtgacgatcgagagtggttttgtttttatatacgatgatgaacga  13160500                                                                             --------->ARR11(3)                                                                   --------->ZAT18                                                                   <---------ZAT18     ---------->DOF2                                               <---------ZAT14    *TSS                                                    <---------------AGL15 ------->At4g35610                                         ----------------->AGL1            <------- -->ANAC58                                                 <-----------------AGL1            <------- -->ANAC58                                               <-----------GT1     <---------ARR11(3) ----->DOF2                                   ---------->DOF2      --------->ZAT14        <---------ALFIN1   aagctcaaaaagaagttaagaaccctagttttttggaggtctctgagtaaaagactgttttacccatagtggacttataggtcttaaatgggccactttt  13160600                                               --------->HSFB2a(1)                                              <---------TOE2(3)                                          ------>MYB83                                          ------>MYB46(1)                                         --------->ANAC46                                        <---------MYB55(2)                                        ------->GAMYB                                      --------->ANAC58                                      --------->ANAC46                                      --------->ANAC58                                     ------->GAMYB                                   <------ZmHOX2a(2)                                    --------->MYB46(3)                              <---------ARR11(3)           --------->AHL20(2)       <---------MYB111(1)                             --------->ARR11(3)          <---------AHL20(1)        <---------ALFIN1<----------DOF2               --------->ICU4          <---------ARR11(3)        <---------MYB52(2)                          ---------->DOF2     <---------YAB1                 <---------MYB55(2)                       --------->ANAC58     --------->ICU4     ----------->GT1 --------->MYB46(3)                   --------->ANAC58      -- --DAG2   --------->ARR11(3)        <---------MYB111(2)      <----------DOF2--------->DAG2     <----- ---DOF2------->TEIL    <---------ZAT6-------->P  <-------TEIL             ---------->DOF2     ------   gagagtaatgaatatatataggcctagagtgaatagcaacaacccaccaaggttctttcacttctttgaaaaaccaaaaaagcaaagatcaacaaaattt  13160700        --------->ANAC46     --------->TOE1(2)   --------->GLK1(2)  <---------ARR14(2)  <---------GLK1(2)                                   --------->YAB1  --------->ARR14(2)                         <---------YAB1 ------->YAB1                     --------->ICU4      <-----------GT1 ----AHL20(2)         ------>ZmHOX2a(1)   --------->ICU4                     --------->TOE2(3) --->AHL20(2)        <---------MYB59      <---------YAB1                  <-----------GT1------->TEIL   atcagattctacgagagtcatttcctaacacatgagatgatgagattattagagtatcacaactctcaactatgtttttccataaactatgcatcgcacc  13160800             ----------->GT1         --------->ARR11(3)                <---------YAB1          ----------->GT1         <---------ARR11(3)   --------->ANAC58            <---------ARR11(3)   <---------ALFIN1           --------->ANAC58            --------->ARR11(3) <<<<<<<<<MYB2        <--  --------->ANAC46            --------->ANAC46        ---------->DOF2 <---------AHL20(2)        <----   attcaccacatgatattgtaactcttaagtctaagccatgaaatcaacattgaagtaaaagaactcacatagtaaattggttttctattggtttatattt  13160900                                                                                                 ----                                                                                                -----                                                                                             --------            <---------ZAT18                                                                  <-------            --------->ZAT14           ------>MYB83                                          <--------            <---------ZAT14      <-----------GT1                                            ---------        <-----------GT1   <----------DOF2                                               <---------ALFIN1      --------->YAB1     <---------ICU4                                                 ----------->RAV1(1) ---------GT1           --------->ICU4------>MYB46(1)      <----------DOF2   -------->P--------->ANAC46 -----AHL20(2)   <---------ICU4<-----------HVH21     <-----------GT1     --------->ARR11(3) <--------   taacaaaattatactgtactcatgtcatctttatgtcaccaaatcacaaactaattttctacttttaaaacaaaacatctaccaattccaccacatatcc  13161000  Previous    Next  AGI:  At4g25890.1    Description:  60S acidic ribosomal protein P3 (RPP3A). Identical to 60S acidic ribosomal protein P3-1 (RPP3A) [Arabidopsis Thaliana] (GB:Q9SVZ6); similar to 60S acidic ribosomal protein P3 (RPP3B) [Arabidopsis thaliana] (TAIR:AT5G57290.1); similar to 60S acidic ribosomal protein P3 (RPP3B) [Arabidopsis thaliana] (TAIR:AT5G57290.2); similar to acidic ribosomal protein P3 [Corchorus olitorius] (GB:ABS72187.1); contains InterPro domain Ribosomal protein 60S; (InterPro:IPR001813) Range:  from: 13159493    to: 13160504    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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