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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
RRTF1(3)
--------->
DREB2C(2)
--------->
RRTF1(2)
--------->
RAP2.3(2)
--------->
RAP2.3(3)
<---------
ALFIN1
--------->
ATERF1(1)
--------->
RAP2.6(1)
<------
NtERF2
--------->
ORA47(2)
--------->
RAP2.3(1)
--------->
RRTF1(1)
--------->
ERF1
--------->
At4g35610
------>
NtERF2
<---------
ATERF1(1)
--------->
DREB2C(1)
<---------
DEAR4(2)
<---------
DREB2C(1)
<---------
RAP2.3(1)
--------->
ANAC46
------->
GAMYB
--------->
RAP2.3(3)
--------->
RAP2.6(2)
--------->
RAP2.3(2)
<---------
ATERF1(2)
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
ATERF1(1)
--------->
MYB46(3)
--------->
DEAR3(2)
<---------
At4g35610
--------->
At4g35610
<---------
ZAT2
<----------
DOF2
------->
TEIL
--------->
DEAR3(1)
------->
GAMYB
--------->
DEAR4(2)
--------->
ANAC58
<----------
DOF2
--------->
ANAC46
<------
NtERF2
--------->
ANAC58
------>
NtERF2
<---------
ATERF1(1)
------>
NtERF2
--------->
RAP2.3(1)
--------->
ARR14(2)
--------->
DEAR3(1)
--------->
RAP2.6(2)
<---------
ARR14(2)
<------
NtERF2
--------->
ANAC58
--------->
ERF1
<---------
GLK1(1)
--------->
LBD16
<---------
At4g35610
--------->
ANAC58
<---------
At4g35610
<---------
LBD16
--------->
At4g35610
--------->
ANAC46
--------->
At4g35610
--------->
ANAC55(2)
<---------
WRKY12
------>
ZmHOX2a(1)
<-----------
RAV1(2)
------>
ZmHOX2a(1)
<---------
ANAC46
<---------
WRKY38(1)
--------->
LBD16
--------->
ZAT2
<---------
DAG2
---------->
CDC5
<---------
ANAC55(2)
<-----------
HVH21
----------->
RAV1(2)
<-----------
HVH21
<---------
AtLEC2
<---------
LBD16
--------->
ANAC46
tcatcctgaaacgccaacgcagcttcagccgccgccttttggatgtccttagcgcaagttgattccgggattcggagtctccaagccgagtcagcgaaat
13018700
>>>>>>>>>
AtERF-4
>>>>>>>>>
AtERF-3
<---------
ZAT2
--------->
At4g35610
<---------
ZAT2
--------->
ZAT2
--------->
ANAC46
<---------
ANAC46
--------->
At4g35610
---------->
DOF2
--------->
At4g35610
<---------
ANAC58
--------->
ANAC58
--------->
bZIP60(2)
<---------
At4g35610
<---------
ARR14(2)
--------->
ANAC58
<---------
DOF5.7(2)
------>
NtERF2
<---------
ANAC58
------>
ZmHOX2a(2)
<------
NtERF2
--------->
ZAT2
--------->
HSFB2a(1)
<---
--------->
ARR14(2)
--------->
RAP2.6(2)
<---------
At4g35610
<---------
HSFB2a(1)
<---
<---------
ARR14(2)
--------->
DAG2
<---------
At4g35610
<---------
MYB46(3)
--------->
ARR14(2)
tgagacaggctgatcggccacgaagggctaaagcggcaacgtcgtgagctcgagctgccatctcagcggtttgaaatgttccgagccaaatccttgtttt
13018800
<
--------->
ANAC46
----
--------->
ANAC58
----
--------->
ANAC58
----
<---------
O2
-----
<---------
TGA1a
-----
<---------
ANAC58
------
--------->
HSFB2a(1)
<---------
ANAC58
<-----
--------->
HSFC1(2)
<---------
bZIP60(2)
------
<---------
HSFC1(2)
<-----------------------
TaNAC69(2)
--------->
LBD16
----------->
TGA1
--------->
HSFC1(2)
<---------
LBD16
----------->
HVH21
--------->
SPL7
<------
MYB83
--------->
MYB52(1)
<---------
ANAC58
<---------
HSFC1(2)
<------
MYB46(1)
==================================================
MYC_MYB
<-----------
GT1
--------->
MYB59
-------->
P
------>
ZmHOX2a(1)
--------->
ANAC55(2)
<--
------
ANAC58
------>
MYB46(1)
------>
NtERF2
<---------
ANAC58
--------->
HSFB2a(1)
------
ANAC58
------>
MYB83
--------->
DEAR3(1)
<---------
MYB46(3)
<---------
HSFB2a(1)
cttgtttggttctctaacctcacaaacccacttaccggagtttctccgacgaactcctctgtatattgggtgacgagtctcacgaaacttcttacgaccc
13018900
--------->
ANAC46
<---------
ANAC58
<---------
ANAC46
--------->
ANAC58
<---------
ANAC58
--------->
ANAC58
<---------
MYB52(1)
--------->
ANAC58
---------
DEAR3(2)
--------->
ANAC58
----------->
RAV1(2)
----->
LBD16
--------->
ZAT2
------>
NtERF2
-->
NtERF2
<------
NtERF2
--------->
DEAR3(1)
----->
MYB52(1)
--------->
At4g35610
<---------
At5g28300
---->
ANAC46
--------->
At4g35610
<-----------
GT1
<---------
ATHB12
---->
DEAR3(1)
--------->
ZAT2
--------->
YAB1
<------
ZmHOX2a(1)
------>
NtERF2
--->
DEAR3(2)
<---------
At4g35610
<---------
AHL20(2)
--------->
ANAC55(2)
----
MYB55(2)
<---------
ZAT2
--------->
AHL20(2)
--------->
ANAC58
--------->
DAG2
--->
MYB46(3)
<---------
ATERF1(1)
--------->
AHL20(1)
--------->
ANAC58
<---------
ICU4
----
NtERF2
<-----------
RAV1(2)
<---------
AHL20(1)
<---------
ANAC55(2)
---------->
DOF2
gccggtttcttggggcagctgctcgcaagcgtcggaatataatcaccgcctgaggaaaccgaagactcgtaatcggagccaaacatttcagaaaaagcag
13019000
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
GLK1(1)
--------->
ANAC58
<---------
AGP1
<---------
ZAT14
--------->
ARR11(3)
--------->
ZAT14
----------->
GT1
--------->
ZAT14
<---------
TOE1(3)
<---------
At4g35610
--------->
At4g35610
--------->
GLK1(2)
<---------
ARR11(3)
<---------
AtMYB61
--------->
YAB1
--------->
ANAC46
--------->
RVE1(1)
<------
MYB46(1)
<---------
WOX13(1)
--------->
ANAC58
---------->
DOF2
<-----------
RAV1(1)
--------->
ATHB12
--------->
ZAT18
<---------
TOE2(3)
<----------
DOF2
--------->
At4g35610
<-------
TEIL
<---------------
AtSPL8
--------->
DAG2
--------->
GLK1(1)
<------
MYB83
------
aaaatgagttcat
tgatcagaagagtactctgtttcaagaaactggataaggtaactaaaagatctctgtcttttttgttggtatggtttgctgaaataa
13019100
<------
<------
--------
<-------
----------
<------
NtERF2
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<---------
LBD16
<---------
AHL20(2)
<---------
ICU4
<-----------
RAV1(2)
<---------
ANAC58
--------->
YAB1
>>>>>>>
ZML2
--------->
AHL20(2)
<---------
ANAC58
<---------
YAB1
--->
YAB1
<----------
DOF2
*
TSS
<---------
TOE2(3)
---------->
DOF2
--------->
YAB1
<-------
tagtttctctctctttctgttctagttcagg
tggatttaatgtttgtagataaataaaagttggagtgagagcatgctgttttataatggcggaagatat
13019200
--------->
ANAC46
<---------
REM1(2)
--------->
O2
---------->
DOF2
<---------
ANAC55(2)
<-----
---
CCA1(1)
--------->
ANAC55(1)
------
---
RVE1(1)
--------->
ANAC46
=======
->
ARR11(3)
--------->
ANAC58
----------->
GT1
=======
--
ARR11(3)
--------->
bZIP60(2)
--------->
YAB1
<------
ZmHOX2a(1)
->
ARR10
--------->
DAG2
--------->
ANAC58
--------->
ANAC58
<--------
--
ARR14(2)
---------->
DOF2
--------->
ANAC55(2)
--------->
ANAC58
<--------
tttagaggcaaaagaaaaggcgaagacggagtttgtgtctctggtaatgccacgtaaactatacacagcgaagcaattgtaaaatgagtagtttaaggat
13019300
------->
MYC3
<-------
MYC3
--------->
TGA1a
--------->
O2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
AGP1
--------->
AGP1
<----------
DOF2
--------->
ARR14(2)
<---------
DAG2
<---------
ARR14(2)
--------->
TOE2(3)
<---------
ARR14(3)
===================================
--------->
ARR11(3)
<---------------
AGL15
----------->
ARR10
--------->
LBD16
--------------->
AGL15
<---------
ATHB12
<---------
O2
--------->
YAB1
----
ARR14(2)
===========================
bZIP_DOF
<---------
YAB1
<-----
--->
ARR14(2)
<---------------------
WRI1
--------->
YAB1
<---------
ANAC58
=================
HOX2a_HOX2a
<---------
ICU4
<---------
ANAC58
================
HOX2a_HOX2a
<---------
YAB1
<---------
ANAC46
-
TOE2(3)
<---------
ARR11(3)
--------->
ICU4
<----------
DOF2
-
TOE1(3)
--------->
ARR14(3)
<----------
DOF2
<-----------
GT1
<-----------
GT1
<-----------
GT1
---
tcactcattaagatctgccatgtgtccagagaagactttttttgacttattcactcgttattattatacctttatgagttttataaactctttgcgtatg
13019400
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
--------->
AHL20(2)
<---------
ICU4
<---------
TOE1(1)
<--------
HAHB4
--------->
ZAT14
<---------
YAB1
<------
ZmHOX2a(1)
<---------
ANAC46
--------->
ICU4
<-------
GAMYB
--------->
ZAT18
<------------
MYB.PH3(1)
<---------
MYB52(1)
<---------
MYB46(3)
<---------
TOE2(1)
<---------
MYB52(1)
--------->
ARR11(3)
<---------
ANAC46
<---------
ZAT14
<------------
AtMYB77
---------->
DOF2
--------->
MYB52(2)
--------->
ALFIN1
<---------
ANAC46
<---------
ARR14(2)
--------->
LBD16
----------->
GT1
<-----------
RAV1(1)
<---------
ZAT18
--------->
MYB52(1)
------>
ZmHOX2a(1)
--------->
DOF5.7(2)
=============================================================================
MADS_MADS
----
YAB1
<---------
TOE2(3)
<---------
REM1(1)
<---------
ICU4
--------------->
AGL15
---->
TEIL
<---------
TOE1(3)
--------->
ALFIN1
--------->
YAB1
<---------------
AGL15
-------
aatgtgtggctgttaaggatttagtgtactaggtgtagggtaaccgttattcattattatattcctgaataaagaaattgtcgttaattgttcacccgtg
13019500
<---------
GLK1(2)
<---------
TOE2(3)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR14(2)
<------
ZmHOX2a(1)
<---------
HSFC1(1)
----------->
GT1
<---------
HSFB2a(2)
<---------
GLK1(2)
---------->
DOF2
--------->
HSFC1(1)
<
<---------
YAB1
<---------
CCA1(1)
------>
ZmHOX2a(1)
-
---------->
DOF2
<---------
ARR14(2)
---------->
DOF2
------
-->
LBD16
--------->
ICU4
<---------
RVE1(1)
<---------
YAB1
--------->
HSFB2a(2)
---
tattagacataaagattgtgagaggatatttaaagatgctcttcttgtgtaatttctcccattcttatagcacatccttctagaatatgaattgggagag
13019600
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AGI:
At4g25480.1
Description:
DREB1A (DEHYDRATION RESPONSE ELEMENT B1A); DNA binding / transcription activator/ transcription factor. Identical to Dehydration-responsive element-binding protein 1A (DREB1A) [Arabidopsis Thaliana] (GB:Q9M0L0;GB:O65612;GB:O82131;GB:Q1ZZS0;GB:Q2HII7;GB:Q5QE70;GB:Q5Y4C4;GB:Q9SAZ3); similar to CBF2 (FREEZING TOLERANCE QTL 4), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G25470.1); similar to DREB1A [Nicotiana tabacum] (GB:ABD65969.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding
Range:
from: 13018224
to: 13019131
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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