Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------YAB1                             <---------AHL20(2)                             --------->AHL20(2)         --------->ANAC46              ------>MYB83                  --------->AHL20(2)                    --------->ANAC58              ------>MYB46(1)                 <---------MYB52(1)                     --------->ANAC58          <---------ARR11(3)     --------->YAB1 <---------YAB1      <---------AHL20(2)                        --------->ARR11(3)    <---------YAB1--------->ATHB51      --------->AHL20(2)  --------->MYB52(1)---------->DOF2     <--   ctaactatgataaaaatccattattttggattaaaattcaaataaaatccaattgaaaacgctaccgaaactcaaaatgaaaaagacctacaaatatgtt  12909200                                                    <---------ANAC55(1)                                   ---------->DOF2  <---------ANAC55(2)                             ----------->GT1        <---------ANAC46                            --------->ANAC58        --------->ANAC55(2)           --------->MYB46(3)                            --------->ANAC55(1)     <---------ANAC58    <---------TOE2(3)                            --------->ANAC46        <---------ANAC58    <---------TOE1(3)                            --------->ANAC58       --------------->AtSPL3       <-----------GT1<----- -------AtMYB61            <---------LBD16    <---------YAB1        <----------DOF2------->GAMYB   ttggtttatataaacccatacatatgttacacggaaaaaaagaaaactactattacgtactggttttagacttttaggtttttaaccacatccaaattat  12909300                              --------------->AtSPL8                            ------>ZmHOX2a(2)   --------->YAB1                           <---------ANAC58                    --------->ATHB12           <---------YAB1                            <---------ANAC58                   <---------YAB1            --------->YAB1                   <---------YAB1                <---------AHL20(2)      <---------MYB52(1)              <---------YAB1  <------------   --------->AHL20(2) XXXXXXXXXXXXXXXXXXXX>MIR778  ---------->DOF2      <---------AHL20(2) ------GT1     --------->AHL20(2)      <----------DOF2          <----------DOF2        <-----------GT1   ccaaattgaatatgaaattttatgatttgatctatgtacacctttagttataataaagcatagtctcttttttttttattatgtttttatttcgtttttg  12909400                       <---------AHL20(1)                       --------->AHL20(2)                            ----------->RAV1(1)                       <---------AHL20(2)                         <-----------GT1                       --------->AHL20(1)                         --------->YAB1                      --------->AHL20(2)                         <---------YAB1                      <---------AHL20(2)                       --------->YAB1                    ------>MYB46(1)                           <---------YAB1                    ------>MYB83                            --------->YAB1                  <---------MYB59                           <---------ICU4                 ----------------->AGL3                    <---------YAB1                 ====================================================================================                ------->TEIL                               --------->ICU4              <---------SPL7                             --------->YAB1                             -             <---------ANAC58                            <---------ICU4               <---------AHL20(2)             <---------ANAC58                            <--------HAHB4               --------->AHL20(2)             --------->ANAC55(2)                         -------->ATHB1      <---------ANAC46   <----            --------------->AtSPL3                       --------->ATHB51  <---------ZAT18     ------        --------->At4g35610                             <---------YAB1     <---------ZAT14   <-------        <---------At4g35610                             <---------ATHB51   --------->ZAT14   ------->TEIL -----AGL1 <---------TGA2(2)         <---------AHL20(2) --------->ICU4    --------->ALFIN1   --------   gaaactcatatgctgacgtaccaaataaatttgggatatataatccagtattgaaacaattattattataacaacagtggagtagtattttaatgcattt  12909500                                    <---------O2                                    <---------bZIP60(2)                                    <---------ANAC58                                    <---------ANAC46                                  --------->REM1(2)                                  <-----------HVH21                                 --------->ALFIN1                               <---------ANAC58      ---------->DOF2          <---------ANAC58                ---------->DOF2                    --- ========MADS_MADS        <---------ARR14(2)              ---------->DOF2              --------->ARR11(3) ---------->GT1           --------->ARR14(2)           --------->ANAC58                --------->GLK1(2) -----AHL20(2)       <---------DOF5.7(2)               --------->ANAC58                <---------ARR11(3) --->AHL20(2)        --------->MYB52(1)              ---------->DOF2                 *TSS     ------- --------AGL15      <---------ZAT14 <---------ANAC58--------->AtMYB61             --------->LBD16 <-- ------->AGL15      <---------ARR14(2)           <------ZmHOX2a(1) ---------->DOF2------>ZmHOX2a(1)   aatggaaaaaaagaaaacagagtaaacggataagcgtgtcgtggagaagaaggaccaaagcaaagtaaagaaagtcatatattcctgaaaatctataaaa  12909600                                                         --------->ANAC58                                                         --------->ANAC58                                            --------->ANAC58                                            --------->ANAC58                                            ----------->GT1                               --------->YAB1         --------->TOE1(2) ------>ARR11(3)              <---------ATHB12        --------->TOE2(2) --->DOF2  <-----------GT1  --------->WOX13(1)   ---------->DOF2   --------->At4g35610            --- -------ARR11(3)     ------>ZmHOX2a(1)  <----------DOF2  --------->ANAC46  ---------->DOF2        ---   gacatttcgcatttatccacttcctcgattcaatcaaaactgcttcaagtaaaaagcctacgaaatagcatcggaccaaaagacaaactcaccgagtaaa  12909700                                                                                    <---------AtMYB61                                                                                   <------NtERF2                                                                                 <---------DEAR3(1)                                                                                 <---------ANAC46                                                                                 --------->ALFIN1                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                                <---------ABI4(1)                                                                                <------NtERF2       -                                                                                <---------LBD16     <                                                                                --------->ATERF1(1) -                                                                               <---------ATERF1(1) --                                                                               <---------RRTF1(1)  <-                                                                               <---------RAP2.3(1) --                                                                               <---------ERF1      <-                                                                               ------>NtERF2       --                                                                               <---------ORA47(2)  --                                                                               <---------RAP2.6(1) --                                                                              <---------DREB2C(2)  --                                                                              <---------RRTF1(2)  ---                                                                              <---------ANAC58    ---                                                                              <---------RAP2.3(3) ---           <---------ANAC58                         <------MYB83              <---------ATERF1(2) <--           <---------ANAC46                         <------MYB46(1)           <---------ANAC46    ---           <---------ANAC58                         <---------ANAC46          <---------RAP2.3(2) ---         <-----------HVH21                         --------->MYB111(2)        <---------RRTF1(3)  ---      ----------->RAV1(2)                          --------->MYB55(2)         <---------DEAR3(1)  ---     -------->P                                    --------->MYB46(2)         --------->ATERF1(2) --- <---------ANAC55(2)                               --------->MYB111(1)        <---------RAP2.6(2)---- --------->ANAC58                                  <---------MYB46(3)         <---------ANAC58<------ --------->ANAC58                                  <---------AtMYB61         --------->ATERF1(1) <--- --------->ANAC46                       ==========================HOX2a_HOX2a<------NtERF2    ------- --------->ANAC55(1)                    ------>ZmHOX2a(2)                    <---------ABI4(1)<------ --------->ANAC55(2)                  <---------ARR11(3)                   --------->ALFIN1 <-------- ------>TOE2(2)               <---------YAB1   <---------YAB1              <---------DEAR3(1) <------ ------>TOE1(2)  ----------->GT1      --------->ARR11(3)   <------ZmHOX2a(1)<---------ATERF1(1) -----   catacgcaacctgtcgtgtaagtaaaaacaatttgatagtgatctctctatgtttggtggaggaagagggcctatgggtggcggcggaggtatgttacgc  12909800         --------->SPL7       --------->TOE1(2)      <---------MYB46(3)      <---------ANAC58      <---------ANAC58    <---------MYB52(1)    <-----------HVH21  <---------ATERF1(2)  --------->ATERF1(2)  --------->DEAR3(1) --------->ATERF1(1) <------NtERF2 ----->NtERF2 ---------ATERF1(1) -------->ABI4(1) ------->RAP2.3(2) --------ATERF1(2) ------->ATERF1(2) --------DEAR3(1) ------->DEAR3(1) ------->RAP2.3(3) ------->RRTF1(2) ------->RRTF1(3) ------>DEAR4(2) ------>RAP2.6(1)                                                                         <---------ZAT2 ------>ATERF1(1)                                                                         --------->ZAT2 ----NtERF2                                                                              ------>NtERF2 ------>RRTF1(1)                                                                <-----------HVH21 ------>DEAR3(2)                                          <---------ANAC58     --------->bZIP60(2) ------>ERF1               --------->ZAT14                <---------ANAC58     --------->O2 ------>ORA47(2)          <---------REM1(1)           <---------MYB52(1)       <---------O2 ------>RAP2.3(1)   <------ZmHOX2a(1)                 <----------DOF2          <---------TGA1a -->NtERF2          =====================================HOX2a_HOX2a           --------->TGA1a    --- ---ANAC55(2)   <---------bZIP60(2)               <------ZmHOX2a(2)            --------->ANAC46<----- ------ATERF1(1)<---------ANAC46                 <---------ARR14(2)          <---------ALFIN1  ------ -->ANAC55(2)----------->TGA1       ------->GAMYB--------->ARR11(3)   <---------ICU4     --------->LBD16 ---ANAC58 <---------At4g35610   --------->MYB52(1)   ===================================bZIP_DOF --- ---GT1<---------SPL7     --------->ALFIN1       <---------ARR11(3)<---------ICU4      <---------LBD16 ---ANAC58 --------->At4g35610  <---------WRKY38(1)------>ZmHOX2a(2) <---------YAB1 --------->ATERF1(1) ---->ANAC46 ----------->HVH21 --------->MYB46(3)--------->ARR14(2)--------->YAB1  <---------ATERF1(1)   gccgccggtcgtgcgatgacgaggaccggtgtagccaacggtggtattcaagatccctttgcttcttcatcatcatcgtccacgtcgtctccggctggaa  12909900                                                                      <----------DOF2                                                                   <---------ATERF1(1)                                                                 <---------LBD16                                                                 <---------At4g35610                                                                <---------ANAC58                                        <---------HSFB2a(2)     <---------ANAC58                                   <<<<<<<<<TBF1               <---------LBD16                              ------>ZmHOX2a(2)          <---------ANAC58                         ---                            --------->ARR14(2)           <---------ANAC58                         <--                            <---------ARR14(3)           --------->ANAC55(2)   <-------GAMYB     <---                            --------->ARR14(3)           <---------ANAC55(2)  --------->MYB55(2) ----                            <---------ARR14(2)           <---------ANAC55(1)  <---------MYB46(3) <---                            --------->AGP1             <---------TGA2(2)     <--------P          ----                            --------->ARR11(3)        ----------->HVH21     <---------ANAC58    -----            <---------TOE1(2)<------ZmHOX2a(2)      --------->At4g35610     <---------ANAC58    <----           <---------AtLEC2 <---------ARR11(3)     --------->GLK1(2)<------NtERF2              <-----         <---------ANAC46  --------->GLK1(1)     <---------KAN4(1) ------>NtERF2              ------- ------>ANAC58             <---------GLK1(1)     --------->KAN4(1)<---------DEAR3(1)   ------->TEIL ----ARR14(2)             ----------->ARR10     <---------KAN4(2)--------->LBD16 <---------MYB46(3) --->ARR14(2)    <---------HSFB2a(2)    --------->HSFB2a(2) <---------ARR14(2)--------->MYB111(2)---- ------>ANAC58   --------->HSFB2a(2)  ----------->RAV1(2)<---------ANAC46   <-------GAMYB   <--------   acgcctctgtttcgcatgtccagaaacagagatcttcttcttctgggtcgaataatctgacgtattccgcggcttctgggttgttgttgaatcttccggt  12910000                         <---------DEAR3(2)                        <---------DEAR3(1)                       --------->At4g35610                      <---------DEAR4(2)                      <---------RRTF1(1)                      <---------ERF1                      ------>NtERF2                      <---------ATERF1(1)                      <---------RAP2.6(1)                      <---------RAP2.3(1)                      <---------ORA47(2)                     <---------RAP2.3(2)                     <---------RAP2.3(3)                     --------->ATERF1(2)                     <---------RRTF1(3)                     <---------RRTF1(2)                     <---------RAP2.6(2)                     <---------ATERF1(2)                     --------->ALFIN1                     <---------ANAC46                     <---------DEAR3(1)                     --------->DEAR3(1)         --------->HSFB2a(2)  <---------DAG2      ------->GAMYB <------NtERF2      --------->AtMYB61<---------At4g35610     --------->MYB46(3)--------->ATERF1(1) --------->At4g35610<---------ABI4(1) <------NtERF2      --------->RAP2.3(1) <---------At4g35610--------->ATERF1(1) ------>At4g35610  <---------ATERF1(1) ----NtERF2        <---------DEAR4(2)                               <---------ANAC58 ------MYB46(3)    <---------RAP2.3(1)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ----->MYB55(2)   <---------DEAR3(1)                              <---------YAB1 ------ATERF1(1)  --------->ALFIN1                          <---------YAB1 -->NtERF2--------->LBD16<---------MYB46(3)                 --------->ICU4        <------ZmHOX2a(1) ---->ALFIN1      --------->ATERF1(1)                     --------->YAB1  <---------GLK1(1) -----DEAR3(1)   --------->At4g35610                     --------->ICU4 <------MYB46(1) ----MYB52(1)--------->ALFIN1 ------>ZmHOX2a(1) <---------HSFB2a(2) <---------ANAC46 -->LBD16<---------HSFB2a(2)  <----------DOF2   --------->HSFB2a(2) <---------ANAC58        <-------- ----->ABI4(2)   <---------At4g35610           <---------LBD16--------->ARR11(3)<---------TOE2(3)   < -LBD16 <---------LBD16<------NtERF2 <----------DOF2     <---------YAB1 <------MYB83      <---------YAB1   ggctgcaacctccggatggagcggcggcggtcctttttcctttgttaattctggaggttatgatgattttgagtgggtttctgaggaagaagatgattct  12910100  Previous    Next  AGI:  At4g25170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G61490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60860.1); contains InterPro domain Uncharacterised conserved protein UCP012943 (InterPro:IPR016606) Range:  from: 12909585    to: 12911590    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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