Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ICU4                                                                                -------->HAHB4                                                       <----------DOF2          --------->YAB1 --------->ATHB12                                  --------->ANAC58            <---------YAB1 --------WOX13(1)                                  --------->ANAC58          --------->YAB1 --ANAC58          --------------->AGL15         <-----------GT1           <---------MYB52(1)       < --ANAC58   <---------AHL20(2)           <-------TEIL  <---------DAG2     <-------GAMYB      -------- --ANAC46  <---------YAB1            <------ZmHOX2a(1)<---------DAG2<<<<<<<<<MYB2   --------->At4g35610   gattgattcgatttttattttcttcaaatatgaattagaggagttcatttgtaacgcctttttggtattggttttccgttaataatagctgaaaatcatt  12886300                                                                                  --------->ARR11(3)                                                                                  <---------ARR11(3)                         <---------RVE1(1)                                        --------->GLK1(2)        ----------->HVH21<---------CCA1(1)                                  --------->ANAC58        --------->WRKY12--------->ARR11(3)                                  ----------->GT1      <----------DOF2   <---------ARR11(3)                                  --------->ANAC58  --------->ANAC58      --------->AHL20(1)      ----------->RAV1(1)        --------->DAG2  --------->ANAC58      <---------AHL20(1)  <---------PCF2      --------------->AGL15 -----------GT1     ---------->DOF2    <-----------RAV1(1)      <---------------AGL15 ->ATHB12      <------ZmHOX2a(1)     <----------DOF2----------->GT1       ---------->DOF2       -----   tgtaacgcctttgacgaggatgaaaagatatttttagggctttgtgggagcaacaagttatatcatctagtaatagaaaagcaaaatctatagtccaacg  12886400                                                                        <------ZmHOX2a(1)                                   --------->YAB1                 <---------ANAC58       <---------bZIP60(1)                             --------->YAB1                       <---------ANAC58       --------->bZIP60(1)                             <---------ICU4                       <---------ANAC46    ----------->HVH21                            <---------ATHB12                     <------NtERF2       --------->At5g28300                          --------->WOX13(1)                   --------->ALFIN1      <-----------HVH21                       <---------ARR11(3)                     <XXXXXXXXXXXXXXXXXXXXMIR398A          <                 ------>NtERF2<----------DOF2                 --------->ATERF1(1)  <---------ANAC46 -                 <---------RAP2.6(3)     ---------->DOF2     <XXXXXXXXXXXXXXXXXXXXMIR398B/C<---------ZAT14 -->GAMYB       <---------ETT(1)  <---------YAB1            <---------AtMYB61     <---------LBD16----   aaaacaaaatgacatttgccgacaatatcaatctttatcataagaaagtaccagtgcgaatggaggtggcttgaggacgtagtttgcggtgacagcactt  12886500                                                                                            ------>ZmHOX2a(1)                                                                                           --------->TOE2(3)                                                                                        <---------ARR11(3)                                                                                        <---------ARR14(2)  --------->RAP2.6(2)     <---------ALFIN1                                              --------->ARR11(3) ---------At4g35610   <---------At4g35610                                               --------->ARR14(2) -------->At4g35610   --------->At4g35610                   <-----------GT1       ------->TEIL ------>DOF2  <---------YAB1                           --------->ICU4      --------->AHL20(2)   -----   gaagcagccattctttgtaattgaagctgcacatttcagacaaaacatagcattgaattgattatctatttgcccaaaaaaatgaatcaatatccttaca  12886600                              <---------MYB46(3)                           <-----------RAV1(1)       --------->HSFB2a(2)                          <---------TOE2(3)          <---------HSFB2a(2)                     <---------ANAC46      ------>MYB46(1)                     <---------ANAC58      ------>MYB83                     <---------ANAC58    --------->AtMYB61 ---------->DOF2 ----->DOF2         <-------TEIL         <---------MYB59 ----------->HVH21                        ---   aagacacatgaaaatgtatacatgcgtttatgttgttgggagaccaaacaaatttctaggtgaaagagtaagagaccagagaaactcgaacatgaactaa  12886700                                                              >>>>>>>>>>>>>>>>>LFY                                                             --------->O2                                                             --------->ANAC58                                                             --------->TGA1a                                                             ========================================                                                             --------->ANAC46                                                        --------->ZAT14                                                        --------->ZAT18                                                        <---------At4g35610                       <--                                                        --------->At4g35610                      <---                                                        <---------ZAT14                          <---                                                    <------ZmHOX2a(1)                            <---                                                --------->ALFIN1                               <-----                                              =========================bZIP_bZIP             <-------                                              <---------TGA1a--------->ANAC58                --------                        --------->TOE2(3)     <---------ANAC46<<<<<<<<<<<<<<<<<LFY          <--------                  <---------ICU4            --------->ZAT14  ======================================bZIP_DOF     *TSS         --------------->AtSPL3    <---------ZAT14  --------->ANAC55(1)            <-------- --------->ALFIN1 <---------------AtSPL3    --------->ZAT18<---------ALFIN1                 <-------- ------>ARR11(3)--------->GLK1(2)    <------ZmHOX2a(1)  <---------ZAT18--------->GLK1(2)<----------DOF2   gatgtggatgagagatagaatcagtacctcaagtttcaaggacgagtgaagtgaggagagcacacgccagtggaatctgtgtgttttgagttttatggtt  12886800 ===MYC_MYB                                                                     --------------->AtSPL3 -------AtLEC2                                                            --------------->AGL15 ---MYB46(1)                               <---------SPL7                 <---------------AGL15 ---MYB83                                --------------->AtSPL3           <----------DOF2 ------MYB46(3)                      <-------MYC3                      --------->ARR11(3) ---P                                ------->MYC3   ------->TEIL   --------->YAB1 --MYB46(3)                         <-----------RAV1(1)   --------------->AtSPL8--------------->AtSPL8 ->ATHB12                      <---------SPL7--------->SPL7        <---------ICU4 -TOE1(3)                     <---------ANAC58   <---------ANAC55(2)   <---------ARR11(3)      <----- -TOE2(3)<---------DAG2       <---------ANAC58<---------TOE1(1)    <--------HAHB4        <---------AHL20(2) -YAB1   <----------DOF2      <---------ANAC46<---------TOE2(1)   <---------YAB1<---------------AtSPL8   ggatggctctgctttttggtaatcgagttgtgtcgtacatgtggcagtacgacgtatcattttgtactatcattatctttttgtagtacatttttttttt  12886900                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                      <------ZmHOX2a(2)                                          --------->AHL20(2)                         --------->ARR14(2)    <---------ANAC58                   --------->YAB1                                <---------ARR14(2)    <---------ANAC46                  <---------YAB1                        --------->YAB1     <-----    <---------ANAC58                  --------->ICU4                       --------->ICU4    <------- <---------ANAC58                   --------->bZIP60(1)                    <---------YAB1    -------- <---------ANAC58                   <---------bZIP60(1) --------->TOE2(3)--------->YAB1      -------- ------GT1  <---------YAB1<---------YAB1  <---------AHL20(2)  <-----------GT1 <---------YAB1---------   ctggcttcgtggctactattgactcattgtgatttgtgtcatcataaattgtcttgaaacttaataacatttgagtcatcataagtggatcagccaatcc  12887000                                                                 --------->ARR11(3)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                            --------->AHL20(1)   --------->AHL20(2)                                       <---------AHL20(1)   <---------AHL20(2)                                   <---------YAB1 -------MYB52(1)                                       --------->AHL20(1) ----->LBD16                                           <---------AHL20(2) ------->GT1                                           <---------AHL20(1) ----LBD16                                             --------->AHL20(2) --ARR14(2)                                       --------->AHL20(2) ->ARR14(2)                 <-----------GT1       <---------AHL20(2)              <-----------GT1 <-- ->GLK1(2)        --------->YAB1               --------->YAB1    <---------ARR11(3)         --------- >WOX13(1)   --------->AHL20(2)        ---------->DOF2--------->YAB1          <----------DOF2     ---   ggtattaaaaaaaaaaaaaatcatcttatttttcaatactataaagcatttataaattataatttattatcttgtgttttcttttcacttattatctcaa  12887100                                      <---------ARR14(2)                                      ------->TEIL                                      --------->ARR14(2)                                      <-----------ARR10                                      <---------ARR11(1)                                     <---------ARR14(1)               ------>MYB83          <---------CCA1(2)       <---------ANAC58            <---------ANAC55(2)       <---------ANAC58            <---------bZIP60(2)      --------->STY1(2)            <---------ANAC46   <---------ANAC58                <---------ANAC58   <---------ANAC58                --------->ANAC55(2)                                         ------ ------>MYB83  ------>MYB46(1)     <---------ANAC58                     <---------YAB1        <------ ------>MYB46(1)                   <---------ANAC55(1)         <---------MYB59          ------->TEIL -------HSFB2a(1)                 ----------->STF1             --------->TOE2(3) --------->CCA1(2) >TOE2(3)    <---------MYB59     <---------TGA2(2)           ------->TEIL       <---------ARR11(3) ------>HSFB2a(1) <-------TEIL  ----------->HVH21        --------------->AtSPL8 --------->ARR11(3)   accttccttgctagaccaaattcatgttagacgtatgacgtatcttatccaatttctacaatgtacctaaaactgtgatagagatatatgaacatagtgg  12887200  Previous    Next  AGI:  At4g25100.1    Description:  FSD1 (FE SUPEROXIDE DISMUTASE 1); iron superoxide dismutase. Identical to Superoxide dismutase [Fe], chloroplast precursor (SODB) [Arabidopsis Thaliana] (GB:P21276;GB:Q9FE21;GB:Q9SW16); similar to FSD2 (FE SUPEROXIDE DISMUTASE 2), iron superoxide dismutase [Arabidopsis thaliana] (TAIR:AT5G51100.1); similar to superoxide dismutase [Raphanus sativus] (GB:AAC15842.1); contains InterPro domain Manganese and iron superoxide dismutase; (InterPro:IPR001189) Range:  from: 12884310    to: 12886705    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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