Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <----------DOF2                  --------->GLK1(2)                ------>ZmHOX2a(1)             <<<<<<<<<TBF1        ------------>MYB.PH3(2)         <---------ZAT14         <---------At4g35610  --------->ICU4 <---------GLK1(2)      <---------ZAT18         --------->At4g35610 ----->GT1 <---------MYB46(3)           --------->ZAT18        <-----------RAV1(1)  <<<<<<<<<TBF1   -   taacatgatgagtttgttagaatctctttgaagacgaacgagtgaacaaactcctaaggctgtttctgctgtctctagttttcttcttcttcatcttctt  12744900                                                                                           ----------                                                                                           <---------ALFIN1          --------->At4g35610                                                            ------>ZmHOX2a(2)     <--------HAHB4                                                                     --------->PCF2     <---------ICU4                                                                     <------ZmHOX2a(2)     --------->YAB1                                                                    --------->ARR14(2)    <---------YAB1                   ---------->DOF2        <---------ANAC46       <---------TOE1(2)    <---------ATHB12          ---------->ID1             <---------GLK1(2)  --------->GLK1(2)    --------->ICU4          <---------MYB46(3)   <---------ANAC58          <---------GLK1(2) ----->NtERF2           <---------HSFB2a(1)      <---------ANAC58      ---------->DOF2 <---------ARR14(2)   gaggccatcattatctgaagaagagaaggtttgttcttctaaagtgagttcgcgttccagtttcttagagaccgaaagaatctcgtagggatcccacagc  12745000                                                     <---------ANAC58                                         --------->LBD16                                        <---------ANAC58       --------->ARR14(2)               <---------ANAC46       --------->GLK1(1)                <---------ANAC58       --------->ANAC55(2)       <---------ARR14(2)              <---------LBD16         <---------ANAC55(2)       <---------GLK1(1)            <----------DOF2  <---------ANAC58               ---------->DOF2 ->RAV1(1)              --------->MYB52(1)------>NtERF2<---------MYB52(1)    <----------DOF2 <-------   gactgtccgaattcccaatccaaaaacgacggatgatgctttgcggacaaggcttccgttttgaaacgtgatgccttccctttgacaaaagcatgctttc  12745100                                                                 ------>NtERF2                                                              <---------ATERF1(1)                                                              <---------At4g35610                                                              --------->ZAT2                                                              <---------ZAT2                                          <---------MYB46(3)  --------->At4g35610                                         --------->ALFIN1  --------->LBD16                                       --------->ALFIN1   --------->ANAC46           <---------------                                 --------->ALFIN1       <---------ATERF1(1)       <------------------ --------->ANAC46             <---------TOE2(3)     --------->ANAC58        --------->ZAT6        --- ---DOF2  --------->ZAT6      <---------TOE1(3)     --------->ANAC58  --------->REM1(1)   <<<<<<<<<TBF1   tctgcgcatcgaactctaaaacagtatgttttgaggtttgggagtggctgagccaagcctgcgcagctgccttcatcaactctagtctcttcttcttctc  12745200                                                                                                  <--                                                                                     ------>ZmHOX2a(2)       <<<<<<<<<TBF1                                     <<<<<<<<<TBF1             <---------ARR14(2)    <<<<<<<<<TBF1                                <------------------------ANAC81   --------->ARR14(2) ---------ANAC81                            <---------CCA1(2)                  <---------LBD16    --- ------ANAC81                    <---------CCA1(2)    <<<<<<<<<TBF1        <----------DOF2        <-- --->ZmHOX2a(1)      <----------DOF2     ------>ZmHOX2a(1)    <-----------------AGL1<------ZmHOX2a(2)   ctcttcttcttcttcattttcatctttagcctctcgtttcttcctcatctctcttcttcttcttctccattttgggacttttggggatccaagtcttatt  12745300                                   ------->TEIL                                   <---------ARR14(2)           <-----------HVH21       --------->ARR14(2)                      <----------DOF2   ----------->GT1        <---------ANAC58                     <---------ANAC58                     <  <---------TOE1(3)       <---------ANAC58         <---------ANAC58---------->ID1                   -  <---------TOE2(3)       <---------ANAC46         <---------ANAC58<---------CCA1(2)            ----- -------ANAC55(2)      *TSS        <-----------ARR10           <---------ANAC58                <----- ------>ANAC55(2)--------->TOE1(3) <---------ARR11(1)     <---------At4g35610          <----------DOF2 -------YAB1     --------->TOE2(3)<---------ARR14(1)      --------->At4g35610      <----------DOF2 <-   atgtaaggtttaatgtcagccttaagtttcttgttcgaatctactcacttctgtcttgtcttctgtcttgtctcttccttttcatctttctttgtttatt  12745400                                                                                        <---------ANAC46                                                                                       --------->At4g35610                                                                                       <---------At4g35610                                                                                      <---------MYB46(3)                                                                                     <--------P                                                                                    <---------ANAC58                                                                                    <-------GAMYB                                                                                   <---------MYB46(3)                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                                <---------bZIP60(2)    <-----------GT1                     --------->At4g35610                --------->At4g35610 ---------AHL20(2)                      <---------At4g35610              <-----------RAV1(2) -------->AHL20(2)               --------->ARR11(3)               --------->MYB52(1)<---------ANAC58 ---->AHL20(2)                   <---------ARR11(3)       --------->AHL20(2)    <---------ANAC46 ----YAB1                        <---------GLK1(2)       --------->AHL20(2)<---------At4g35610 --------AHL20(2)           <----------DOF2            --------->YAB1   <------ZmHOX2a(2)----------->HVH21   atttattttcatgcctcgttttttcttagcctttagattttcagatgacaaaaacaaaaataaaaaaaaaacagatcagatgacttggttgctgacaatt  12745500              --------->YAB1                            ----------->GT1             <---------YAB1                        <---------TOE2(3)       ----------->RAV1(2)          --------->AHL20(2)                      ---------->DOF2          <---------At4g35610          <---------AHL20(2)                  ----------->GT1 <-----------GT1     <---------YAB1     <---------MYB52(1)   <---------ARR11(3)            --------->At4g35610     --  --------->ICU4     <-------TEIL            --------->ARR11(3)<-----------------AGL1          ------   gttcattatcaatttatcatcgattcgtttattgtcaacaatttagagatgttaaagatggtaataacccattgggcatctgaagcccatgtttaatact  12745600                 <----------DOF2        ------>ZmHOX2a(2)       --------->At4g35610       <---------At4g35610      <---------ARR11(3)                                    --------->At4g35610    ----------->HVH21            --------->AHL20(2)     --------->YAB1   <-----------HVH21             <---------AHL20(1)     <---------ICU4             <---------AHL20(2)   --------->LBD16               --------->AHL20(1)    <---------YAB1          <---------YAB1  <---------ANAC55(2)            <---------AHL20(2)  --------->YAB1            <---------ANAC46  --------->ANAC55(2) --------->YAB1       <----------TaMYB80                  --------->ICU4 ------>P  <---------ANAC58   --------->YAB1         --------->REM1(1)         ----------->GT1   ---- --->ANAC46<---------ANAC58 --------->AHL20(2)<-----------GT1     <---------At4g35610         -------   caacccgtgatctgcgtttctttatcacaaaataataaaatgagcattttccccttcatcatagctgtagatgatgaagtgatgtttaatcaacaattag  12745700                                                                                                    -                                                                    <---------MYB46(3)              -                                                                   <--------P                      <-                                                                <---------TOE1(3)                  <-       <-----------GT1                      <---------bZIP60(1) <---------TOE2(3)        --------->At4g35610 ----->YAB1                   <---------YAB1--------->bZIP60(1)<-----------RAV1(2)       <---------At4g35610 -->YAB1       ----------->RAV1(1)        <-----------GT1   --------->WOX13(1)          XXXXXXXXXXXXX   cataacatttttctgaacaacacaacttcattgttatttgtttatgacctcacaaaaatggtcattcaggttgttcagacttctctctcttagctgtttc  12745800  Previous    Next  AGI:  At4g24700.1    Description:  unknown protein Range:  from: 12744632    to: 12745323    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24710.1    Description:  ATPase. similar to CDC48B, ATPase [Arabidopsis thaliana] (TAIR:AT2G03670.1); similar to unknown [Populus trichocarpa] (GB:ABK94553.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64241.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain Chaperonin clpA/B; (InterPro:IPR001270); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 12745557    to: 12749005    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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