Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ----------->RAV1(2)                                                                                      --------->ZAT2                                                                                      <---------ZAT2                                                                                      <---------At4g35610                                                                                      --------->At4g35610                <-----------GT1                                                     <-----------RAV1(2)             <---------ICU4                                                   --------->ARR14(2)             --------->YAB1    ------>ZmHOX2a(2)            <-----------HVH21--------->GLK1(1)      <    <---------ATHB12         --------->ARR14(2)           --------->ALFIN1   <---------GLK1(1)      <   ------>MYB83 --------->YAB1<------ZmHOX2a(2)     <---------YAB1    --------->TOE2(3)            --   ------>MYB46(1)           <---------ARR14(2) --------->TOE2(3)     --------->TOE1(3) <---------MYB46(3) ---->DOF2 <---------KAN4(2) ------->TEIL     <---------TOE2(3) --------->ZAT6<---------ARR14(2)   <-   agaccaatcttcgaataatcaccataacatggatccaaattcaaattcaacgttattagagtggtcacagtaccttagcaaatccctcagctgttccagt  12666800                                          <---------ARR14(2)                                          --------->ARR14(2)                                     ============================HOX2a_HOX2a                                     ==================================HOX2a_HOX2a                                    <------ZmHOX2a(2)                                    ===================================HOX2a_HOX2a                                    =============================HOX2a_HOX2a              --------->CCA1(2)    --------->ARR14(2)    --------->DEAR3(2)             <---------ARR14(2)      --------->TOE2(1)   --------->MYB52(1)            --------->LBD16           --------->TOE1(1)   --------->SPL7               --------->ANAC46          ===================================HOX2a_HOX2a <---------SPL7                 --------->LBD16     <---------YAB1                               <--- ---------ANAC58               <---------HSFB2a(2)<---------ICU4=============================HOX2a_HOX2a ---------ANAC58               <---------LBD16   <---------ATHB12                          ---------- ------->At4g35610             --------->HSFB2a(2)--------->YAB1------>ZmHOX2a(1)        <---------YAB1 --------At4g35610  --------->GLK1(2)------>ZmHOX2a(2)    ------>ZmHOX2a(1)           <------ZmHOX2a(2)   ctgcgtaccgaagaagatagagactctagtcttcccggatcccaaatccaaatcatcatcctcgtccttagccataagagacttagggatcatcaaaggc  12666900                      <---------MYB52(1)                      <------NtERF2                     ------>NtERF2                    --------->RAP2.3(2)                    --------->DEAR3(1)                   --------->ATERF1(1)                   --------->RAP2.3(1)                  --------->LBD16                  ------>NtERF2                --------->MYB46(3)                --------->DEAR3(2)              <---------ARR14(2)            ----------->ARR10       <---------ALFIN1                          --------->ARR14(2) <---------ZAT2 ------>ZmHOX2a(2)                <---------ARR14(2) --------->ZAT2<------ZmHOX2a(2) --------->HSFB2a(2)                            --------->WOX13(1) --------->At4g35610--------->RAP2.3(3)         --------->GLK1(1)      <---------O2 <---------At4g35610--------->RRTF1(3)   --------->ANAC46         ---------->DOF2 <---------ATHB12 --------HVH21--------->ARR14(2) <---------HSFB2a(2)  <---------At4g35610  <-------GAMYB >DOF2 --------->ANAC46          --------->TOE2(3)    <---------ZAT2   --------->O2--------->YAB1 <--   ttcagctccccgctccgatccgccgtcgttttcttccataacaacaccacaaatccagctactagtgccaaagacgtcgttgcaatcacaagtacaacat  12667000                                 <---------ZAT2                      --------->ATHB51                                               <---------MYB52(1)                      --------->ATHB12                                              <-----------HVH21                     <---------YAB1                                                 <-----------TGA1                     <---------ATHB12                                              <---------O2                     <---------ATHB51                                              --------->TGA1a                     --------->ICU4                                                --------->bZIP60(2)          --------->GLK1(2)      --------->At4g35610                               --------->ANAC46          <---------ARR14(2)     <---------At4g35610                               --------->ANAC58          ------->TEIL<---------ICU4                                               --------->ANAC58          --------->ARR14(2)<---------ANAC58                            <---------At4g35610          <-----------ARR10 <---------ANAC58               ---------->DOF2         --------->O2     --------->MYB52(1) <---------WOX13(1)      <---------------------WRI1        --------->LBD16 ---------HVH21   ------------>ATHB5--------->At4g35610    ==================================bZIP_DOF   cgtcggataacgaatctgtccccataattgacttgagctgcttaaacaaatcggaagcatacaaagcagaagtcatcttcttcccccgtcactctctctc  12667100                             ===============HOX2a_HOX2a                             <------ZmHOX2a(2)                             ==========================HOX2a_HOX2a       --------->ANAC58                       =============HOX2a_HOX2a                        *TSS                 <---------ARR14(2)                                  --------->HSFB2a(2)                 --------->ARR14(2)                          ---------->CDC5           ----------->GT1                ====================HOX2a_HOX2a           <------NtERF2--------->At4g35610                <------ZmHOX2a(1)                        <---------MYB46(3)            <---------ZAT6              <---------TOE2(3)      <------ZmHOX2a(1)<---------MYB46(3) --------->ANAC58      --------->LBD16  <------ZmHOX2a(1)             <---------AtMYB61 <---------At4g35610  <--------     <---------LBD16<-----------RAV1(2)         <------ZmHOX2a(1)    <---------HSFB2a(2)  <---------AHL20(2)   tctctctccagggtttgaggattcaggagagatcgaagaggaagagaagaggacgatggtggctcagcgttgcagaagccaagagaagagagttaattga  12667200                   ------->TEIL              <-------GAMYB             <---------ANAC58             <---------ANAC46             <---------DEAR3(1)             <---------ANAC58           <---------ANAC46          <------NtERF2         <---------MYB46(3)        --------->ALFIN1                                                     <---------ANAC55(2)      <---------MYB46(3)         ------>ZmHOX2a(1)                           ----------->GT1      --------->MYB55(2)     <---------PCF2                                <---------ATHB12     <---------AtMYB61      <------MYB46(1)                        <----------DOF2     --------->ALFIN1       <------MYB83 <----------DOF2          --------->TOE2(3)               ---     <---------DEAR3(1)    <---------MYB46(3)                  <-----------GT1 --------->AHL20(2) <-- ----CBF<---------ANAC46  --------->ALFIN1             <----------DOF2 ------------>CBF--------->TOE2(3)   gttatcggtggtggggcgttgaatctgagtgggtccttctctccttttcttatttgacttttattttacctttgtcaataagtaaatcacattaatccaa  12667300                                                        <---------ICU4                                                     --------->YAB1                                                 <-----------GT1                     --------->ZAT14            --------->AHL20(2)                     <---------ZAT14         <---------AHL20(2)                     --------->ZAT18         --------->AHL20(2)                   <---------AHL20(2)                     <---------ZAT18        <---------AHL20(2)                    --------->AHL20(2)                    <---------ZAT6     ------>ZmHOX2a(1)--------->YAB1       --------->AHL20(1)  <-----------GT1  <---------------AtSPL8   <---------AHL20(1)               --------->AHL20(2) ------>AHL20(2)   --------------->AtSPL8   --------->AHL20(2)  <-------TEIL <---------ARR11(3) -------AHL20(2)  <---------ANAC46    --------->TOE2(3)<---------ATHB12<-----------GT1       --------   ttttttactaaacttgaatttagtgtacataatatgagttcctcaattaatttactaatcatcgagtacataaaaaccatatattaaaattttaaaaaaa  12667400                                                     <-----------RAV1(2)                                               --------->ANAC46                                               --------->ANAC58                                               --------->ANAC58                                              ------->MYC3--------->At4g35610                                              <-------MYC2<---------At4g35610                                              <-------MYC3<---------ZAT2                            -                     --------->DAG2           ------->MYC2--------->ZAT2                            -                --------->At5g28300    <----------DOF2  <------ZmHOX2a(1)                        ----      --------->ATHB12           --------->ANAC58   <---------ATHB12                       <---------ANAC58   ---------->DOF2 ---------->DOF2     <---------DAG2--------->YAB1                        <---------ANAC46 ->AHL20(2)    ----------->GT1   --------->ANAC58 --------->WOX13(1)----------->GT1        <---------ANAC58   tcaacaaaagattgggacagtaaaaggggaatgctaagctactttacacatgcaatcaggagctggataagtgtaaatagactgtttctgtttgcgtaga  12667500           <---------ANAC46           <---------ANAC58           <---------ANAC58       <---------ANAC58       <---------ANAC58 --------->At4g35610 --------->ZAT2                     <---------At4g35610        --------->ARR11(3)              ------ <---------ZAT2                 <---------ICU4          ------>MYB83                   --------->MYB52(1) <---------At4g35610         --------->YAB1             ------>MYB46(1)               ------>ZmHOX2a(1) ------>TEIL                 <---------ICU4            --------->WOX13(1)            <---------MYB59 -------->GLK1(2)           <---------ATHB12      ----------->HVH21       ---------->DOF2--------->ZAT6 ----->ANAC46         <---------ZAT18    ------>ZmHOX2a(1)     <---------ARR11(3)  ---------->ID1<---   cgaagctggccttgcctgtttttgtgcccattcattactgctccttcaaactctgaccaatctaagctcttgttcacaaagacttgtcctaacagtatca  12667600                                                                    --------->At4g35610                                                                    <---------At4g35610                                                                    --------->GLK1(1)                                                               <---------HSFB2a(2)                                                               <---------LBD16                                                               --------->LBD16  <------MYB83                                                 --------->HSFB2a(2)  <---------ANAC46                                            <---------ANAC46  <------MYB46(1)                                             <---------LBD16 <---------MYB46(3)  <-------TEIL                         --------->KAN4(2)         <---------REM1(1) --------->MYB59    --------->CCA1(2)           <---------ANAC58 --------->LBD16    <-----------RAV1(1) --->YAB1<---------TOE1(3)                      <---------ANAC58--------->LBD16    --------->ARR11(3) --------RAV1(1)    --------->GLK1(2) ------->TEIL     <---------AtLEC2<-------TEIL<---------ARR11(3)   tgttgggtcttatggttttgagattcaagtaggctctatgcgcctgtaatgcgttgtgcatgttcccgggagatgcagagatgaagatgtcgctcttcat  12667700  Previous    Next  AGI:  At4g24520.1    Description:  ATR1 (ARABIDOPSIS P450 REDUCTASE 1). similar to ATR2 (ARABIDOPSIS P450 REDUCTASE 2) [Arabidopsis thaliana] (TAIR:AT4G30210.1); similar to ATR2 (ARABIDOPSIS P450 REDUCTASE 2) [Arabidopsis thaliana] (TAIR:AT4G30210.2); similar to NADPH:P450 reductase [Glycine max] (GB:AAN85869.1); similar to NADPH-ferrihemoprotein reductase [Vicia sativa] (GB:CAA81211.1); similar to NADPH-cytochrome P450 oxydoreductase isoform 1 [Populus balsamifera subsp. trichocarpa x Populus deltoides] (GB:AAK15259.1); contains InterPro domain NADPH Cytochrome P450 Reductase (InterPro:IPR015702); contains InterPro domain Flavoprotein pyridine nucleotide cytochrome reductase; Range:  from: 12662851    to: 12667171    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g24530.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61608.1); similar to expressed protein [Prunus persica] (GB:ABJ96379.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78778.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 12667368    to: 12670023    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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