Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <------MYB46(1)                                                                                             <------MYB83                                                    <---------ATHB12        --------->ICU4 <--------P                                            ---------->DOF2              <------NtERF2    <---------ANAC58                                           --------->MYB52(1)          --------->RAP2.6(2)<---------ANAC58                    <---------ANAC46    --------->ANAC46               --------->ANAC58  --------->MYB55(2)                <---------ANAC58     --------->ANAC46       --------->ARR11(3)           <---------MYB46(3)                <---------ANAC46     --------->ANAC58     ------->TEIL --------->ANAC58  <------MYB83                <---------ANAC58     --------->ANAC58--------->YAB1   <---------ZAT18    --------->ATHB12             ----------->HVH21--------->TOE2(3)     --------->ICU4    --------->ZAT18    <------MYB46(1)         <---------ZAT14    <---------AHL20(2)------->GAMYB <---------ARR11(3)  <------ZmHOX2a(1)         --------->ZAT14<---------AHL20(2) ----------->RAV1(1)      <---------RAP2.3(3)<---------WOX13(1)   actaggtattgttcagtgacttgtgtttattttcttaacaagacacaacagcgaatgatgaacatctctgagggcgcaattaggagtagattggttggca  12660400                                                                      --------->ICU4                                                                      <---------YAB1                                                                    <---------ICU4                                                                    --------->YAB1                                                                   --------->ICU4                                                                   <---------ATHB12                                                            <---------ANAC55(2)                                                         <---------ATHB51                  --------->ATHB12                                                         --------->ICU4                 <---------AtLEC2                                                 <---------------AtSPL8                 <---------ANAC58     --------->KAN4(2)                           --------------->AtSPL8            <-----------RAV1(1)    <---------HSFB2a(1)                 --------->ARR11(3)  ----------->GT1  <------ZmHOX2a(1)  <----    --------->HSFB2a(1) <---------At5g28300      --------------->AtSPL3<---------ICU4   <---------ANAC58   <---------KAN4(2)   <-----------GT1  <---------ARR11(3)--------->YAB1  <---------LBD16 <---------YAB1   atagggatgttctctaccaaaaattttactgttttttcgcaagatttagttatcgtacaattatgtaaaatcattatcaggaaatttgttgcatgattgt  12660500                                    <---------ICU4                                   <---------YAB1                                <------ZmHOX2a(2)                               <---------ARR11(3)                               --------->ARR11(3)                       --------->LBD16   <---------ANAC58     --------->ALFIN1 --------->ANAC55(2)<---------ANAC46                                        <---   <---------ANAC46<---------ARR14(2)    <---------ANAC58                                        <---  <---------TOE2(3)--------->ARR14(2)  <-----------RAV1(1)     <------ZmHOX2a(1)           <---------TOE2(3) -----YAB1    ------->TEIL   <---------YAB1                 <---------LBD16      <---------YAB1  <---   gtttgaggtggaaatgaaccgcatccgtattaagatcatttttgctggtggaaacaatgttaccaggaaactgaacttggttttttatagattaatgtga  12660600                 --------->YAB1               <---------AHL20(2)         <---------ANAC55(2)                   <---------ANAC58         ----------->GT1                       <---------ANAC58         --------->ANAC55(2)                  <-------TEIL    --------->ANAC55(2)                     ------->MYC4    <------MYB83<---------YAB1              ------->MYC2    <------MYB46(1)                         <-------MYC2    <---------ANAC55(2)                     <-------MYC3   --------->MYB111(1)                      ------->MYC3                                        <----   --------->MYB59                      ------->TEIL                   <------ZmHOX2a(1)     <-------   <---------------AtSPL8               <-------TEIL                  <----------ID1         --------   <---------------AtSPL3       --------->ANAC46                    --------->YAB1--------->ANAC58   --------->MYB52(2)           --------->ANAC58                    <---------ICU4----------->GT1<---   --------->MYB46(2)           ----------->HVH21                  <---------ATHB12     ---------->DOF2  <---------MYB55(1)            --------->ANAC58               ------------>CBF   --------->ANAC58 <---------MYB52(1)--------->ZAT6    <---------ANAC55(2)       <---------------------WRI1--------->DAG2 ------ANAC46  --------->AHL20(1)    --------->ANAC58   <---------ANAC58          --------->ANAC46 ------ANAC58  --------->AHL20(2)    --------->ANAC55(2)<---------ANAC58          --------->ANAC55(2) ------ANAC58  <---------AHL20(1)    --------->ANAC58   <---------ANAC46      --------->ALFIN1  <----   cttgttaggtaccgtaatataatactagttggctacgacacgtacatgtgcgtttattgcttgaagccaataaggacaaggtggacgtaataaagtgtgc  12660700                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                          <------NtERF2                                                                                          <---------MYB52(1)                                                                                          -----------                                                                                         <-----------TGA1                                                                                         <---------RAP2.6(3)                                                                                  <-----------RAV1(1)                                                                                 <---------TOE2(3)                     --------->YAB1                                            <---------AHL20(2)           <---------ARR14(2)                                                 --------->AHL20(2)           --------->ARR14(2)                                            <---------ALFIN1------>NtERF2      <---------AtLEC2                                                   ----------->RAV1(1)<--------     <---------MYB46(3)                                                 --------->MYB46(3)<---------REM1(2) <---------MYB46(3) <---------YAB1                                     --------->ANAC58  <-----------HVH21 -----ANAC58 ------>ZmHOX2a(2)<---------At4g35610                      --------->ANAC58 --------->ANAC46 --ZAT18   <---------AGP1     --------->At4g35610          *TSS      <---------ALFIN1   <---------bZIP60(1) ->ZAT18   ------->TEIL<---------YAB1       <---------TOE2(3)    --------->ARR14(2)     --------->bZIP60(1) -------DOF2--------->At4g35610        --------->ZAT6  ---------->DOF2--------->ANAC46  --------->ATERF1(2) -----ANAC58<---------At4g35610 ------->GAMYB<-----------RAV1(1) <---------ARR14(2)     <---------ATERF1(2)   ttgttgttggatggatctgaatatgatgactcaactgtccaactctaatgttgttgctaaagacccaaatcccacccacatttaatgttgccgtcacgga  12660800 ->ANAC55(1) --ANAC55(2) ->ANAC46 ->ANAC58        ------>ZmHOX2a(1) ->ANAC58  <<<<<<<<<TAC1 ->ANAC55(2)------->GAMYB                   --------->ZAT14                    <-----------GT1 >HVH21    <------------AtMYB77        <---------ARR14(2)                ------>ZmHOX2a(1) -LBD16   --------->ZAT2    --------->GLK1(1)            <----------DOF2--------->TOE2(3)    <-------   aacagttttcccaactgtcctaaatcagtgatacccatgcctattctgaactcaactctctttcgaaactcaatccttatataacacatcccatttaagc  12660900                                                                                               <-----                                                                                        <-----------RAV1(1)                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                               ------>NtERF2  -------                                                                              <---------PCF2  -------                --------->ZAT2                                              <---------ATERF1(1)<-----                --------->At4g35610                                         <---------MYB46(3)-------       <---------ALFIN1                                                    <---------AtMYB61  -------   --------->At4g35610          --------->AHL20(2)            >>>>>>>GRF7  <---------DEAR3(1) <------  --------->ANAC46              --------->AHL20(1)           <-----------RAV1(2)--------->ATERF1(1)  --------->ANAC58              <---------AHL20(2)         <-----------HVH21--------->ABI4(2)<-------  --------->ANAC58           --------->YAB1        ----------->HVH21       --------->ALFIN1  ======== ----GT1        <---------At4g35610    <---------ANAC46   <---------ZAT6<---------DEAR3(1)   <-------   ctataagctacacatatcagctctctcacaaaaataaaatggagggaagcccagtgaccagtgtcaggctctcttcggtggtgcctgcttctgtggtagg  12661000                                                                                         --------->ZAT18                                                                                         <---------ZAT14                                                                                         --------->ZAT14                                                                                       <---------bZIP60(1)                                                                                       --------->bZIP60(1)                                                                                    ----------->HVH21                                                                                   ------->PIF5                                                                                   ------->MYC3                                                                                   <-------MYC4                                                                                   <-------PIF5                                                                                   <-------PIF4                                                                                   <-------MYC2                                                                                   ------->PIF4                                                                                   ------->MYC2                                                                                   ------->MYC4          --------->O2                                                             <-------MYC3     <          ========================================bZIP_DOF                        <---------ANAC55(2)          --------->ANAC46                                                        --------->O2      -          --------->ANAC58                                                        --------->ANAC55(2)          <---------O2                                                            <---------O2     --          --------->TGA1a                                                         --------->ANAC58 --          --------->ANAC58                                                        --------->ANAC46---     --------->ANAC46                                                             --------->TGA1a ---     --------->ANAC58 --------->ANAC58                                            --------->bZIP60(2) -MYB46(1)----------->HVH21                                                       <---------TGA1a --- -->MYB55(2)        <---------ALFIN1                        --------->DEAR3(1)    --------->ANAC58<-- -->MYB111(2)    <---------ZAT18                            --------->RAP2.3(2)  ------->TEIL    <--- -MYB83   --------->bZIP60(2)                       <-----------HVH21          --------->ZAT18   <--- -->MYB46(2)   <---------At4g35610                  <---------SPL7             <---------ZAT14   ---- -->MYB111(1)  <---------ZAT2                 <---------ALFIN1                 <-------TEIL  <------- ---MYB46(3)   --------->ZAT2             --------->At4g35610        ----------------------->TaNAC69(2) -P  --------->ANAC58 --------->ANAC58    <---------At4g35610<---------RAP2.6(3)<------------OsbHLH66 ===================MYC_MYB  ------->TEIL------->TEIL       --------->RAP2.3(3)<---------ZAT18  <---- --MYB55(1)    --------->At4g35610     ---------->DOF2      <---------ANAC46  --------->ALFIN1<------   tgagaacaagccacgacagctcacacccatggacttagccatgaagctccactacgtccgagccgtctacttcttcaagggtgcacgtgacttcactgtc  12661100  --------->TGA1a                                               <---------DEAR3(2)  <---------TGA1a                                            <-----------HVH21  --------->O2                                              --------->ZAT2  <---------O2                                              <---------ZAT2  <---------ANAC46                                          <---------TGA1a <------NtERF2                                        <-----------HVH21 ---------DDF1                                       <---------TGA1a------>ZmHOX2a(2) ----->NtERF2                                        =======================================MYC_MYB ------->DEAR3(1)                                    --------->ANAC58        <---------ETT(1) --------->HVH21                                     --------->ANAC46    --------->GLK1(1) ------>DEAR3(2)                                     --------->bZIP60(2) <---------GLK1(1)         -- ------>RAP2.3(1)                                    --------->TGA1a<---------LBD16                <- ------>ATERF1(1)                                    --------->O2 <---------ARR14(2)               -- ----NtERF2                                          <---------O2 --------->ARR14(2)        <-------- ------RAP2.3(1)                                     =======================================MYC_MYB<- ------ATERF1(1)                                   <---------ALFIN1<------ZmHOX2a(2)      ------->GAMYB -->NtERF2                <---------ZAT14       <-----------GT1 ----------->ARR10   ------->GAMYB<--- ----RAV1(1)              --------->ZAT14  --------->TOE2(3)================================MYC_MYB-- -----ETT(2)          --------->ZAT6       --------->YAB1 <-----------RAV1(2)----------->HVH21 <----- -----HVH21         <-----------GT1 --------->ANAC46 --------->ANAC58 --------->LBD16    --------->ANAC46   gccgacgtgaagaacaccatgtttactctacagtctctactccaatcttatcaccacgtctcaggtcggatccggatgtccgacaacgacaacgacactt  12661200            --------->TOE2(3)     ------>NtERF2  <---------At4g35610                 <---------SPL7  --------->At4g35610                <---------ANAC58 ------->ZAT2                        <---------ANAC58                              --------->ALFIN1 --------ZAT2                ------->GAMYB                                       <---------O2 ------->At4g35610           ----------->RAV1(1)                     <---------ZAT14 -ALFIN1 <---------ALFIN1   --------->MYB46(3)         <---------WRKY12     --------->ZAT14      ---- --------At4g35610          --------->ANAC58         ------>NtERF2   --------->ZAT14  <---------ANAC46 --------RAV1(2)            ----------->HVH21--------->ALFIN1        --------->ZAT18  <---------ANAC58 --------->RAV1(2)   --------->At4g35610    <-------MYC3    <---------------------WRI1<---------ANAC58 ------HVH21<---------MYB59 --------->ANAC58------->MYC3--------->MYB52(1) --------->ALFIN1      ----   cagctgcagccataccttacattcgctgcaacgacagtggcatacgcgtggtcgaggccaacgtcgaagagttcacagtggagaagtggctcgagttgga  12661300  Previous    Next  AGI:  At4g24500.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO61596.1) Range:  from: 12658504    to: 12660615    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g24510.1    Description:  CER2 (ECERIFERUM 2); transferase. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT3G23840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61598.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 12660759    to: 12662666    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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