Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->MYB52(1)          --------->LBD16                   --------->MYB52(1)                        <---------WRKY38(1)<------NtERF2              --------->LBD16                                <---------WRKY12  ----------->GT1          --------->ARR14(2)                     --------->TOE2(3)             --------->LBD16-------          <---------ARR14(2)             ---------->DOF2 --------->LBD16  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---ID1  <---------GLK1(1)          ----------------->AGL1  <------ZmHOX2a(2)<---------LBD16  <------ -------------->ANAC81         <---------ICU4 --------->GLK1(1)  ------->GAMYB--------->RAP2.6(2)----   aaaacaaaaacaaatccgaagaaaccgaattcaaaattgcccaaaaagaaatctaaatcccgatcaacgggagataatagccggaaaaaatccagataac  12571400                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                                  <-                  <---------DEAR3(1)                                                              <--                 --------->RAP2.6(3)                                                              ---                 --------->SPL7                                                                   ---               <---------SPL7                                                                    <---               --------->LBD16                                                              <--------       --------->ANAC58                                                                  ------>ZmHOX2a(1)       --------->ANAC58 --------->GLK1(2)                                                ============    --------->LBD16 <------NtERF2                                                        ============  <---------LBD16<xxxxxxxxxxxxxxxxsmallRNA(i)                                         ------>MYB83<-- -->MYB52(1)   ----------->HVH21             <---------ARR11(3)                       ------>MYB46(1) ---DOF5.7(2)<---------LBD16                 --------->ARR11(3)                   --------->ARR11(3) --->GAMYB<---------GLK1(1)                  --------->GLK1(2) <---------YAB1     <---------ARR11(3)-   ggaaaccggaagaaacccggacggcgattctaaacttacatcggaaaaatctttctctgaaaaatactatagagagaagagagagaccttcctcctttta  12571500           <---------AHL20(2)           --------->AHL20(2)       --------->AHL20(2)     --------->TOE2(3)     <----------DOF2                                                           --------->HSFC1(1) <----------DOF2                                                        --------->ARR11(3) -----ZmHOX2a(2)                  <-----------GT1                       <---------GLK1(2) -------ARR11(3)        --------->AHL20(2)                              <---------ARR11(3)        <-- ------>ARR11(3)       <---------ICU4                            <---------ARR11(3)        --------->MYB52(1) ------>AGP1       --------->AHL20(2)                            --------->AHL20(1)     <---------ICU4 ------CCA1(2)     <---------AHL20(2)                            --------->ARR11(3)     --------->YAB1 --DOF2<---------AHL20(2)     <---------AHL20(2)                --------->CCA1(1)      <---------YAB1 ======HOX2a_HOX2a<---------AHL20(1)                            --------->RVE1(1)      --------->ICU4 =====HOX2a_HOX2a --------->AHL20(2)                   --------->AHL20(2)      <---------HSFB2a(2)<-- -------AGP1      <---------AHL20(2)             --------->TOE2(3) --------->TOE2(3) --------->YAB1-- ----->ZmHOX2a(2) --------->AHL20(1)        <---------ATHB12--------->AHL20(2) --------->HSFB2a(2)---   gatctttctttaattaaaaatttaatttttatatttttagcatctaatcagcctcaaaaatataaaatatcttagatttttctcgaataataataacgaa  12571600                                                                                  <-------MYC2                                                                                  ------->MYC2                                                                                  ------->MYC3                                                                                  <-------MYC4             <---------At4g35610                                                  ------->MYC4             --------->ZAT2                                                       <-------MYC3             <---------ZAT2                   =============================================MYC_MYB             --------->At4g35610              <----------CDC5                    <---------TGA1a     --------->AHL20(2)                      <---------At4g35610                 --------->O2     <---------AHL20(2)                  ----------->HVH21                       <---------ANAC55(2) <---------AHL20(2)                   -------->ATHB1              ----------->HVH21                 < --------->AHL20(2)                   --------->ATHB12----------->GT1            <---------O2     <-- -------AHL20(1)                      <---------ICU4  <---------ZAT6             --------->TGA1a ---- -------ARR11(3)                <---------AHL20(2)  <---------ANAC58      --------->YAB1         <--- ------->AHL20(2)              --------->AHL20(2)   <---------ANAC58      <---------ICU4      ------- ------>ARR11(3) <---------ALFIN1    <---------YAB1<------ZmHOX2a(1)     <---------ATHB12    <-------   tatatatataattcgagctccacttgctccaaatttaaaatcattgacgctgaggagtgtcaaaacgcttgacaaatgatcacacgtgtaagcctatgag  12571700                                                                             <---------DAG2                                                                 --------->WRKY38(1)                                                                 --------->WRKY12 <---------MYB46(3)                                              --------->WRKY45 ---------AtMYB61                        --------->CCA1(2)      --------->DOF5.7(2) -------MYB46(3)                        <---------ARR11(3)  <---------ARR14(2) ----->ALFIN1           --------->YAB1  --------->ARR11(3)  --------->ARR14(2) ------AtMYB61   <---------ZAT18    ---------->DOF2        <---------CCA1(2) <----------DOF2 -->ATHB12       --------->ZAT18  <---------MYB59      --------->ANAC58     <---------DAG2 --YAB1     <---------WOX13(1)    --------->TOE2(3)    --------->ANAC58     *TSS  <-----------GT1   tggtggtcgatttgactgatgcactatcaacacatacctaaagatatagagagagaaacgcatatcgttgactctccccctttttcactctcttcattta  12571800                --------->YAB1                <---------ICU4               <---------YAB1                                                              --------->WRKY12             <---------ICU4                                                                ----------             --------->YAB1                                                                --------->WRKY38(1)            <---------YAB1                          --------->ANAC58                     <----------DOF2          <---------ICU4                            --------->ANAC46        --------->AHL20(2)          --------->YAB1                 --------->ANAC46        ------->TEIL   <-----------GT1    --     <---------ALFIN1        <----------DOF2        --------->ANAC58        <---------AHL20(2)  <----   ttcttcccctcatcatcatcatcatcttcttctttaaccaaaaacacaacttacaagaaaactgttgaatctttgtatttatttacatctcctttgacct  12571900                                                                            <------NtERF2                                                                          <---------ANAC46                                                                          <---------DEAR3(1)                                                                          --------->ALFIN1                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                         <---------LBD16                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                         <---------ABI4(1)                                                                        <---------RRTF1(1)                                                                        <---------ERF1                                                                        ------>NtERF2                                                                        <---------DEAR4(2)                                                                        <---------RAP2.3(1)                                                                        <---------RAP2.6(1)                                                                        <---------ATERF1(1)                                                                        <---------ORA47(2)                                                                       --------->ALFIN1                                                                       <---------RRTF1(3)                                                                       --------->ATERF1(2)                                                                       <---------ATERF1(2)                                                                       <---------ANAC46                                                                       --------->DEAR3(1)                                                                       <---------DEAR3(1)                                                                       <---------RAP2.6(2)                                                                       <---------RAP2.3(2)                                                                       <---------RRTF1(2)                                                                       <---------RAP2.3(3)                                                                      <------NtERF2                                                                      --------->RAP2.3(1)                                                                      --------->ATERF1(1)                                                                      <---------ABI4(1)                  <------MYB46(1)                                    <---------ATERF1(1)                  <------MYB83                                       <---------RAP2.3(1)                 <---------MYB46(3)                                  <---------DEAR4(2)                 <---------AtMYB61                              ---------->DOF2    --------->ALFIN1              --------->MYB55(2)                    --------->ICU4  <---------RAP2.3(2)      <---------ARR14(2)                            <---------YAB1  <---------DEAR3(1)   <---------AtMYB61      --------->ARR14(2)                       <---------At4g35610 <---------At4g35610----------->HVH21      --------->GLK1(2)                        --------->At4g35610 --------->At4g35610--------->ALFIN1     <---------GLK1(2)                         <---------ZAT2--------->ZAT2 --------->ATERF1(1)  --------->YAB1<--------P                <-------GAMYB      --------->At4g35610  <------ZmHOX2a(1) ->HVH21      <---------MYB46(3)         <---------MYB46(3)  <---------At4g35610--------->ALFIN1 ------->YAB1 --------->ATHB12     --------->At4g35610    <---------At4g35610  <------ZmHOX2a(1) ------DOF2  <---------AtMYB61     <---------At4g35610    --------->At4g35610--------->ALFIN1     ---   ttaataagaatctgagtggttggtctctgatttgatgagatgactgttgagctgatgatgagcagctacagcggcggcggaggaggaggtgatggttttc  12572000              <------NtERF2              --------->RAP2.3(1)             <---------ATERF1(1)             ------>NtERF2             <---------ORA47(2)             <---------RAP2.3(1)             <---------DEAR4(2)             <---------ERF1            <---------RAP2.3(3)            --------->ATERF1(2)            <---------RAP2.3(2)            <---------DEAR3(1)            --------->DEAR3(1)            <---------ATERF1(2)            <---------ANAC46           --------->RAP2.3(1)           <---------ABI4(1)           --------->ATERF1(1)           <------NtERF2           ------>NtERF2          <---------RAP2.3(1)          ------>NtERF2          <---------ATERF1(1)         <---------DEAR3(1)         <------NtERF2         --------->ATERF1(1)        <---------LBD16        <------NtERF2                       <---------HSFC1(2)            <------ZmHOX2a(1)        ------>NtERF2                       --------->HSFC1(2)     --------->ALFIN1             -----        --------->At4g35610                 <---------At4g35610    <---------ANAC46            <-----        --------->LBD16                     --------->At4g35610<---------LBD16                 <-----        <---------At4g35610       <----------DOF2          <---------ARR14(2)                  <-----       --------->DEAR3(1)   <-----------GT1--------->GLK1(2)   <---------At5g28300            -------      <---------LBD16      <---------ARR14(2)              --------->ARR14(2)                <-------    ------->GAMYB          --------->ARR14(2)         <---------AtLEC2    ========================HOX2a_HOX2a   --------->MYB46(3)      --------->ARR11(3)        <---------ZAT14 <---------AtMYB61       <------- --->ZmHOX2a(1)            <---------ARR11(3)        --------->ZAT14 --------->ALFIN1      ------>ZmHOX2a(2)   ctgcaatcgccgcggcggcgaaaatggaagataccgctttgagagaagctgcttctgcagggattcacggtgtggaggagtttcttaaactgatcggtca  12572100                                                   --------->DEAR3(1)                                                <---------ANAC58                                                --------->TGA1a                                                ===============MYC_MYB                                                --------->O2                                                <---------TGA1a                                                <---------O2                                                <---------bZIP60(2)                                                <---------ANAC58                                                --------->TGA2(1)          ------>MYB83                          <---------bZIP60(1)         --------->MYB52(1)                     --------->bZIP60(1)        --------->AtMYB61                       <---------TGA2(1)        ==================================================MYC_MYB        ------->GAMYB                         <---------TGA2(2)                                    --       <---------MYB52(2)                    ----------->HVH21                                     <<       <---------MYB55(2)                    ----------->TGA1                                      <-       --------->MYB46(3)                   <---------WOX13(1)                                  <----      --------->ANAC58                   --------->WRKY38(1)                                    -----      --------->ANAC58                  --------->At5g28300                                     -----     ------->GAMYB                      <-----------HVH21     --------->At4g35610               <----    <---------MYB55(2)                <---------DEAR3(1)--------->DOF5.7(2)                   <------ZmHOX2a(2)    <---------MYB111(2)              --------->LBD16    <---------MYB52(1)                   <-------    --------->MYB46(3)              ======================MYC_MYB                            <------- ----->DOF2                         ------->GAMYB --------->ATERF1(1)                        -------- ----WRKY38(1)                     --------->MYB46(3)  <-------GAMYB                         <------- ----WRKY45 ------->GAMYB         <---------At5g28300<------NtERF2                  <---------REM1(2) ----WRKY12 ==============================================MYC_MYB  <---------HSFB2a(2)       -------- -->WRKY18(1)       <-----------HVH21<---------LBD16------>NtERF2  --------->HSFB2a(2)       -------- ----HVH21------>MYB46(1)        --------->MYB52(1)<---------DEAR3(1)            <---------------AGL15 -ZAP1--------->ANAC46<-----------RAV1(2)----------->HVH21<---------DOF5.7(2)   <-----------GT1------   aagtcaacaaccaacggagaagagtcagacggagataaccgcggtgactgacgtcgccgttaacagcttcaagaaggtcatttctctactcggtagatct  12572200        --------->ANAC58     --------->ARR14(2)     <---------ARR14(2)                    --------->ANAC58   --------->LBD16                         --------->ANAC58 ------->ARR14(2)                    --------->ANAC58             <-------GAMYB <<<<<ZML2                           --------->ANAC46            --------->MYB55(2) --------ARR14(2)                    --------->ANAC58           <---------AtMYB61 -----HSFC1(1)                     <---------DOF5.7(2)          --------->ALFIN1 ---->HSFB2a(2)                   <---------WRKY38(1)        <---------DREB2C(2) ---->HSFC1(1)                    <---------WRKY12        ------->GAMYB                 <---------ANAC46 -----HSFB2a(2)                  --------->DOF5.7(2)      --------->ANAC46  --------->ALFIN1 --AGP1 --------->ANAC58        <-----------HVH21   --------->ANAC58     --------->ALFIN1 --ARR14(2)                    --------->ANAC46   ---------->DOF2<---------MYB46(3)  --------->ALFIN1 ->ARR14(2)                   --------->LBD16 <---------ANAC46 <---------MYB52(1) <---------AtMYB61 --ARR11(3)             --------->ZAT2    --------->MYB46(3) <---------DEAR3(1)--------->ALFIN1 ->ARR11(3)             <---------ZAT2------->GAMYB --------->ANAC58    <------ZmHOX2a(1) <------ZmHOX2a(1) ->AGP1 --------->ANAC46--------->At4g35610------->GAMYB --------->MYB46(3) <---------AtMYB61    ---- >ZmHOX2a(2)    <-------TEIL<---------LBD16--------->ANAC46 <---------LBD16<------ZmHOX2a(1)     ----   agaaccggacacgctagattcagacgagctcccgcgtcaacgcaaacgccgtttaagcaaacgccggtggttgaggaggaggtggaggtggaggagaaga  12572300  Previous    Next  AGI:  At4g24240.1    Description:  WRKY7 (WRKY DNA-binding protein 7); transcription factor. Identical to Probable WRKY transcription factor 7 (WRKY7) [Arabidopsis Thaliana] (GB:Q9STX0); similar to WRKY11 (WRKY DNA-binding protein 11), transcription factor [Arabidopsis thaliana] (TAIR:AT4G31550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61392.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 12571776    to: 12573735    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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