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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                   <
                                                                                                  --
     ------>MYB46(1)                                                                              --
   <---------MYB59                                    --------->ICU4                            <---
<-----------GT1                             --------->ANAC58       <----------DOF2             -----
---->GT1                                <-----------HVH21  <---------ANAC58                 <-------
->MYB59          <----------DOF2        --------->TOE2(3)  <---------ANAC46          <-----------GT1
--AGL15       <---------ALFIN1         --------->ANAC46    <---------ANAC58  <---------TOE1(2)------
---AG------>MYB83<---------DAG2--------->LBD16        <-----------RAV1(1)   ------>ZmHOX2a(1)<------
---AGL1    <-----------GT1   <---------LBD16--------->ANAC58    <-----------GT1 <---------MYB52(1)<-
 
aataaacctaacattcaccactttaagtccaaaccggaatcaacgtcaagctatgtaatgttgcttatttctttatgtccttcgtttgtaacatttcccg  12564600
     --------->ZAT14
     <---------ZAT14    <-----------GT1
-------GAMYB         --------->ARR14(2)
------->MYB55(2) ------>ZmHOX2a(2)                                                <---------ANAC58
--------->GT1  <---------ARR14(2)            <---------SPL7                     <---------YAB1
------MYB52(1) --------->ARR14(2)         --------->At4g35610                  --------->KAN4(2)
---->LBD16   <---------DEAR3(2)        <---------At5g28300                 <------MYB46(1)       ---
--LBD16     --------->ETT(1)<---------RAP2.6(3)--------->SPL7              ----------->GT1       ---
--->LBD16 <-----------HVH21<---------ANAC46--------------->AtSPL3     --------->ATHB12     <-------GAMYB
---LBD16 <-----------RAV1(1)------>NtERF2 <---------At4g35610 <-----------RAV1(1) <---------ANAC58
--------MYB46(3)<------ZmHOX2a(2)     <-----------GT1   --------->TOE2(3)  <------MYB83   <---------MYB46(3)
 
gtggttactactctgtcggatccagttttgccgtctagtttttacagcggtacgataaatctcaaatgttgtttgatttggttattcttgcgatggttag  12564700
                                                                                                   -
                                                                                            <-------
                                                                                           ---------
                                                                                         --------->YAB1
                                                  <---------ICU4                         <--------HAHB4
                                               --------->ANAC46                          -------->ATHB1
                                       --------->ANAC46           --------->AtMYB61      <---------ICU4
                                       --------->ANAC58           <---------ALFIN1      --------->ICU4
                            <---------ZAT6  <---------REM1(2) --------->MYB46(3)       --------->GLK1(2)
------>TOE2(3)             <---------WOX13(1)<---------ALFIN1------->TEIL------>ZmHOX2a(1) <--------
------>TOE1(3)  <---------ANAC46       --------->ANAC58  --------------->AtSPL8    --------->YAB1 --
 
ccttaatttcgctagatttatgtgtatttgagtgatagctacaagcctacacatcattaccatgtaccaccatctccttattcaaatcagaatcattatc  12564800
                                                                                                   <
                                                                                                   <
                                                                                                   <
                                                                                               <----
                                                                                             -------
                                                                                             <------
                                                                                        <---------AHL20(2)
                                                                                        --------->AHL20(2)
   --------->MYB46(3)                           <---------ICU4                       --------->AHL20(2)
 --------->ARR14(2)                             --------->YAB1                       <---------AHL20(2)
 <---------ARR14(2)                          --------->YAB1                          --------->AHL20(1)
-------->At5g28300                       ---------->DOF2                            --------->AHL20(2)
--ICU4      ---------->ID1        <---------DEAR3(2)           <---------REM1(1)    <---------AHL20(2)
>ICU4  <---------DAG2           --------->DDF1 --------->ICU4  --------->ALFIN1    --------->AHL20(2)
-YAB1  <----------DOF2        <-----------RAV1(1)  --------->AHL20(2)              <---------AHL20(1)
------->ANAC46      <----------DOF2  ---------->DOF2    ---------->DOF2     <---------WRKY38(1)<----
 
gccgtaaccacttttgtcattttctttttttatatgtcggtaaagaaagaataatgaaataaagaggtgtaagtaagagtcaacaaaataatttaagagc  12564900
      ----------->GT1
    <------------CBF
---------ANAC46
---------ANAC58
---------ANAC58                                                                     <-----------GT1
-----ANAC58                                                                 --------->ARR11(3)
-->ARR11(3)                                     <---------AHL20(2)          <---------ARR11(3)
---ARR11(3)                                     --------->AHL20(2)      ---------->DOF2      <------
-----ANAC58          <----------DOF2<-----------TBP   *TSS        --------->ATHB12  --------->ANAC46
 
ttgtgtgaattgataaaaacactccttttctgttcttggttttatatgaaatttataaacaaactcgagtgattacaaagaacttataaaccacttatgt  12565000
                                                        <----------DOF2
                                                      <-----------------AG             <---------CCA1(1)
                                                      <-----------------AGL1           <---------RVE1(1)
                                            <---------ARR14(3)                        <---------ARR11(3)
                                            <---------ARR11(3)                        --------->AHL20(1)
                                            --------->ARR11(3)                    ---------->DOF2
                                            --------->ARR14(3)                 --------->At4g35610
                                            <---------ARR14(2)                 <---------At4g35610
         --------->AHL20(2)                 <---------GLK1(2)      <---------At4g35610<---------AHL20(1)
-----RAV1(1)       --------->AHL20(2)     ----------->ARR10        --------->At4g35610--------->ARR11(3)
 
ggcatactaaaatttaacaaaaaaaaatgttttgcgaaaaataagaagattttgttcatcttttttggtaagatgccagtttagctaaagatatttttca  12565100
                                         --------->ANAC58
                                         --------->ANAC58
                                         --------->ANAC46
                                       <---------ALFIN1
                                      <---------REM1(2)               --------->MYB46(3)
                                     <---------ALFIN1                 --------->ANAC58
             --------->YAB1       --------->ANAC58                    --------->ANAC58
       --------->YAB1             --------->ANAC46            <---------ANAC58
    <---------ICU4                --------->ANAC58          <---------AHL20(2)
  <---------AHL20(2)        ----------------------->TaNAC69(2)<---------ANAC58              <-------
<---------AHL20(2)       ---------->DOF2 --------->ANAC55(1)<-----------GT1       --------->ANAC46
 
tatataaaaatgacaataaacacattacaaaagacaaaccccacacggctctctctagccaaattacttggccacgaccataaacacaaaacaccgctta  12565200
                                             ------>NtERF2
                                             <---------RAP2.3(1)
                                           --------->RAP2.3(1)
                                           --------->ATERF1(1)
                                          <---------ATERF1(1)
                                         --------->ALFIN1------>NtERF2
                                         <---------DEAR3(1)
                                       --------->At4g35610
                                       <---------At4g35610     --------->At5g28300
                                  <---------MYB46(3)    >>>>>>>>>AtERF-4
                                  --------->MYB55(2)   --------->ATERF1(1)
                                 <---------AtMYB61    --------->At4g35610                       ----
                               <------MYB83<------NtERF2>>>>>>>>>AtERF-3                        ====
                               <------MYB46(1)<------NtERF2   ----------->GT1                  -----
                              <---------AtMYB61--------->DEAR3(1)                              -----
                              --------->MYB111(2)     <---------ZAT2                        <-------
                              --------->MYB111(1)     <---------ATERF1(1)                   --------
                              --------->MYB55(2)      --------->ZAT2                       <--------
                 ----------->GT1 --------->ALFIN1     <---------At4g35610                --------->YAB1
                <---------HSFB2a(2)  --------->ZAT18 <---------ARR14(2)                 <---------ATHB12
     --------->GLK1(2)        <---------MYB46(3) <---------------------WRI1       ------>ZmHOX2a(1)
 --------->HSFB2a(2)          --------->ALFIN1--------->ATERF1(1)                 ==================
---CDC5         --------->HSFB2a(2) <---------ANAC46 --------->ARR14(2)           ==================
 
gcttctaaaatctgaacatcgagaaaaaatgagttggtggtgggctggcgccatcggagctgccaaggtaaatttcaattcaatccttcaaatcatatcc  12565300
  ------>ZmHOX2a(2)
 <------ZmHOX2a(2)
--------->ARR14(2)
<---------ARR14(2)
<---------ARR11(3)
--------->ARR11(3)
-->ZmHOX2a(1)
=========HOX2a_HOX2a                      --------->ZAT14
---->TOE2(2)                              <---------ZAT14
---->TOE1(2)                              <---------ZAT18                               <---------HSFB2a(2)
--ARR14(2)        <---------WOX13(1)      --------->ZAT18                          <---------HSFC1(2)
->ARR14(2)      --------->ATHB12  <---------AHL20(2)                               --------->HSFC1(2)
-CCA1(2)     <---------At4g35610  --------->AHL20(2)                            ---------->DOF2
========HOX2a_HOX2a             <----------DOF2                          --------->MYB46(3)
=========HOX2a_HOX2a        <---------CCA1(2)      --------->At4g35610  ------->TEIL    --------->HSFB2a(2)
 
tccgatcttcatcttcaactgattgaaaatcatctctttaatttgtgtactcgcagaagaaactcgacgaagatgaaccatcacaaagcttcgagagcgt  12565400
                                              --------->GLK1(2)
                                             --------->ARR14(2)                               ------
                                             <---------ARR14(2)         <---------MYB46(3)   ------>NtERF2
                                             <---------GLK1(2)         <---------AtMYB61     <------
                                            --------->HSFB2a(1)        --------->ALFIN1      <------
            <-----------HVH21               --------->GLK1(1)        --------->LBD16        --------
            <----------DOF2                ----------->ARR10       <---------LBD16          <-------
        <---------DEAR3(1)                <------NtERF2       <---------ALFIN1           --------->ANAC46
     --------->ATHB12                   <---------ANAC46   --------->ANAC46              <---------DEAR3(1)
     <---------ICU4               --------->ZAT2<-----------GT1 <---------ALFIN1 ---------->DOF2
    <---------YAB1    <---------HSFB2a(1)--------->LBD16   <---------ETT(1)   --------->AtLEC2<-----
  --------->YAB1 --------->HSFB2a(2)   <---------LBD16 <----------DOF2<---------MYB52(1)<---------LBD16
 
cgctctcatcatcggcgttactggaatcgtcggaaacagcttggcggagattctccctctttccgacacacccggtggtccatggaaagtctacggcgtc  12565500
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AGI:  At4g24220.1   
Description:  VEP1 (VEIN PATTERNING 1); binding / catalytic. similar to wound-responsive protein-related [Arabidopsis thaliana] (TAIR:AT5G58750.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63254.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:  from: 12564955    to: 12566765    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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