Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               -------->ATHB1                                             --------->ATHB51                                            <---------ATHB51                                            --------->ICU4                                         ------------>ATHB5                                       --------->ANAC46                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                 ------>ZmHOX2a(2)                             <---------ARR14(2)                <------ZmHOX2a(2)                             <---------ARR11(3)                --------->HSFB2a(1)                             <---------AGP1 <---------YAB1     <---------HSFB2a(1)                             --------->ARR14(2)                <----------TaMYB80                             --------->ARR11(3)               <---------ARR14(2)                             <-----------ARR10                --------->ARR14(2)                 <---                     --------->DAG2    --------->ANAC58       --------->ARR11(3)              <------                  ---------->DOF2      --------->ANAC58       <---------ARR11(3)           <---------ANAC46         ---------->DOF2     --------->ARR14(3)               <-----------ARR10            <---------ANAC58       <---------HSFB2a(2)   --------->GLK1(2)                --------->ARR14(3)           <---------ANAC58    --------->ARR11(3)      <------ZmHOX2a(1)<---------ICU4   <---------ARR14(3)          --------->MYB52(2)    <---------ARR11(3)    ----------------------->TaNAC69(2) <------ZmHOX2a(1)      <---------ANAC46 -------GT1   --------->LBD16<---------ARR14(3)          ---------->DOF2      <---------AtMYB61  ---- >AHL20(2)  <---------At4g35610=====================================HOX2a_HOX2a  ----------->HVH21  -   acccgagttcttgaagcggagaaagagtgaggatcttggactcgccattattgtgagacaaaaggatcttccctcgagttgtggtgatgggttccttgtc  12533500  --------->ANAC58                              <----------DOF2  --------->ANAC46                         <---------ZAT2  --------->ANAC58                         <---------At4g35610 ------ETT(1)                              --------->At4g35610---------->DOF2             <-------TEIL -----HVH21                                --------->ZAT2 <----------ID1                 --------->CCA1(2) ------->HVH21                    ----------->GT1  --------->REM1(2)    ------->TEIL    --------->ARR11(3) --------->DOF2    <---------ALFIN1 --------->ARR11(3)   <------ZmHOX2a(1) --------->MYB52(1)     ---   cgacaagcaatagcaaggcttccactcggcttcgaagagataatcagctgctttgtagaggagacaaagaaatgaatcaacgatgtctaagatacagaac  12533600                                                      <-----------GT1                                                     <---------CCA1(2)                                             <---------ZAT2         --------->RAP2.6(3)                 <---------At4g35610        <---------DOF5.7(2)               --------->At4g35610        --------->MYB52(1)                <---------At4g35610      <---------MYB52(2)                 <---------DEAR3(1)     <---------At4g35610                 --------->MYB52(2)     --------->At4g35610                 <---------MYB46(3)    ------->TEIL                       <-----------HVH21 ------>ANAC46                  ------>ZmHOX2a(1) <----------DOF2               ---------->DOF2   acgacgaagctaacggcttcgttcagccatgttcctgctacggtcgctgctccttttatcttcatcacagccatggctcaacaaaagcttagagagtttg  12533700                                 <---------ANAC58                                 <---------ANAC55(2)                                 --------->ANAC55(2)                                 <---------ANAC55(1)                                 <---------ANAC46                                 <---------ANAC58                                <-------TEIL                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                              --------->ARR14(2)                              --------->ARR11(3)                                   <---------AHL20(2)                 <---------AHL20(2)   <---------YAB1                               --------->AHL20(1)                <---------AHL20(1)    --------->ICU4                               --------->ARR11(3)                --------->AHL20(1)--------->LBD16                               --------->YAB1             --------->AHL20(2)--------->CCA1(2)                                --------->AHL20(2)           <----------DOF2    --------->AGP1<-----------GT1                <<<<<<<<<GATA-1     --------->ARR11(3)       <---------ARR11(3)                       <---------DAG2     --------->ARR14(2)       <---------ARR14(2)                       <----------DOF2     <---------ARR14(2)      <---------GLK1(1)                       ------->TEIL  <---------AHL20(1)     <-----------ARR10       --------->GLK1(1)                   --------------->AtSPL8     <---------ARR11(3)     ----------->ARR10                    <---------------AtSPL8  <---------GLK1(2)   atatacaaatcttctttatatatttgaagagagatccgtgatgatttttccacttgtacaattgtgtaatgtactttatctataatatatagaacctctc  12533800                                                    *TSS                                               <---------YAB1                                             <---------CCA1(1)                         ------->TEIL                                             <---------RVE1(1)                  <---------YAB1              <-----------GT1               <---------ARR11(3)                 <---------TOE1(2)            <-----------GT1                 --------->ARR11(3)              <---------ANAC46   <----------DOF2                       <------ZmHOX2a(1)        --------->GLK1(2)------->TEIL   tctgtctttctgtttttctctctctatttgagagttgagactaggagatattatggagagaaacgaagaatcagagagtcgtatgaatgtatatagtcta  12533900                                                                                     --------->MYB52(1)                                                                                    <---------ALFIN1                                                                                   --------->MYB46(3)                                                                                   ------>ZmHOX2a(2)                                                                                   <---------ABI4(2)                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 <---------TCP20                   <---------AHL20(2)                                         --------->ANAC55(1)                <---------AHL20(1)                                            --------->ANAC58                --------->AHL20(1)                                            <---------ANAC55(2)             --------->AHL20(2)                                               --------->ANAC55(2)           <---------YAB1                                                    <---------LBD16           <---------WOX13(1)             --------->GLK1(2)                 --------->MYB52(1)      <---------ANAC46                   <---------ARR11(3)               <-----------HVH21      <---------ANAC55(2)                --------->ARR11(3)       --------------->AGL15      <---------ANAC58                 ----------->ARR10          <---------------AGL15      <-------      <---------ANAC58     <---------bZIP60(1)                   <-----------------AGL1      <-------      <---------ANAC55(1)  --------->TGA2(1)                     <-----------------AGL3     ---------      --------->ANAC55(2)  --------->bZIP60(1)                   <-----------------AGL2     ---------     <-------TEIL --------->AHL20(2)   <---------TOE2(3)       <-----------GT1--------->ANAC58    <--    --------->CCA1(2)      <---------TGA2(1)     ---------->DOF2 ----------------->AGL3     ---------   tagatgatacgtgattaatatataatatgatgtcataagttgagattttgttaaagactctagaattactatataaggtcacggatccaccggtttgacc  12534000  ----------->GT1 --WRKY18(1) ----GT1                                                                                   --------->ATHB12 -->HVH21                     <-------MYC3                                                <---------YAB1 >WRKY38(1)  --------->ATHB12 ------->MYC3<---------AHL20(2)                  --------->ARR11(3) ---------HVH21              <-----------RAV1(1)                  ------->TEIL--------->GLK1(2) >WRKY12   <<<<<<<<<<<<<<<<<LFY   <---------ANAC46        ------>ZmHOX2a(1)   <---------ARR11(3)<----   ggtctggtattaaaaacattggctaaataacatgtggctgtgagttaattttagactctccttatatgaatttgtcgaaaaatctatatatgttgatagg  12534100                       <----------DOF2                       <---------DAG2          --------->ATHB12         <---------AHL20(2)                                                                        --         <---------AHL20(1)                                                       --------->HSFB2a(2)         --------->AHL20(2)                                                       <---------HSFB2a(2)         --------->AHL20(1)                            <---------YAB1       <----------DOF2        <-    <---------ANAC46<-----------GT1       --------->AHL20(2)             <-----------GT1           -- --ZmHOX2a(1)      --------->AHL20(2)     <---------AHL20(2)        --------->AHL20(2)             <-   aagatggcgaatttattgcaattaactttattttttatacataaaaaaatggaacttatttttgaaataagaaaataacttttgctggaaacgaattcag  12534200              <---------ANAC55(1)              <---------ANAC58              <---------ANAC58              <---------ANAC46       --------->YAB1 ------->HSFC1(2) --------HSFB2a(1)                                  <-------GAMYB ------->HSFB2a(1)                      --------->TOE2(3)                           <---------MYB46(3) --------HSFC1(2)                     <---------AHL20(2)<---------YAB1  ----------->HVH21   aaggttccatagtaatgcgtgtaagagaaactatgtgtattttcttaacttgtgagttgtgaatgaagttgggagtgacaaattggtggtttttgtttct  12534300                     --------->ATHB51                     <---------ICU4                                              --------->ANAC46                    <---------YAB1                                            <---------ZAT18                  <---------ANAC55(2)                                   --------->ATHB51                  --------->ANAC55(2)                                   <---------ICU4                 <-------TEIL                                          --------->ICU4              ----------->GT1  --------->ANAC55(2)                     <---------YAB1             --------------->AtSPL8           <-----------GT1        --------->YAB1        <---------ANAC58             <---------------AtSPL8      <---------AHL20(2)         <---------YAB1         <---------ANAC58             --------->ALFIN1  <---------ANAC55(2)     <---------AHL20(2)     --------->ZAT14   <----             <---------------AtSPL3      <---------YAB1--------->AHL20(2) <---------------AtSPL8<----   tctatatgtatagatgtggtacataattgtatcacatgactatattattctccatatataaatgttttctatcataattgtacacacagtattgtttgtc  12534400  Previous    Next  AGI:  At4g24140.1    Description:  hydrolase, alpha/beta fold family protein. similar to BDG1 (BODYGUARD1), hydrolase [Arabidopsis thaliana] (TAIR:AT1G64670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62910.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 12529885    to: 12533852    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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