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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
>>>>>>>>>
MYB98
--------->
MYB52(1)
------>
MYB83
------>
MYB46(1)
<---------
MYB59
<---------
MYB46(2)
-
<---------
MYB111(1)
<-
--------->
ANAC55(2)
---
<---------
ANAC55(2)
--------->
GLK1(1)
<--
--------->
CCA1(1)
<---------
GLK1(2)
----------->
GT1
---
--------->
RVE1(1)
<-----------
GT1
--------->
ARR14(2)
<---------
ANAC58
----
--------->
AHL20(2)
<---------
ICU4
<---------
ARR14(2)
<---------
ANAC58
-----------
agacttaaatatccaatacctaacttattaccaaaaattcaatccgactcggattttcaaatttgaaagtttccttgaactgaaaaacaacaacgtgaat
12503400
<---------
AHL20(1)
--------->
AHL20(1)
<---------
ARR11(3)
<---------
ANAC46
-------->
YAB1
--------->
ANAC46
<---------
ANAC58
--------
YAB1
--------->
ANAC58
<---------
DAG2
------>
AHL20(2)
--------->
ANAC58
--------->
TOE2(3)
-------
AHL20(2)
<---------
At4g35610
--------->
ANAC58
--------->
TOE1(3)
------>
AHL20(1)
--------->
At4g35610
--------->
ANAC46
--------->
YAB1
<---------
AtLEC2
----->
YAB1
<------
ZmHOX2a(1)
--------->
ANAC58
---------->
DOF2
<---------
ANAC58
<
>
GT1
--------->
MYB59
--------->
At4g35610
------>
ZmHOX2a(1)
<---------
YAB1
<-----
tataataaacaattaggaactgatagctgatgttgtatcagataacacacaagtcaaaatatttcctaaagcataaccttattttgcttgtcgaatagga
12503500
------>
MYB46(1)
------>
MYB83
<---------
MYB111(1)
--------->
ATHB12
<---------
YAB1
<---------
AHL20(1)
------>
ZmHOX2a(2)
<---------
AHL20(2)
--------->
ANAC58
<---------
TOE1(2)
<-----------
GT1
--------->
ANAC58
<---------
TOE2(2)
<---------
ANAC58
-------->
HAHB4
--------->
YAB1
<---------
MYB59
<---------
ANAC58
----------->
GT1
<-------
TEIL
--------->
YAB1
--------->
ANAC55(1)
------->
TEIL
<------
ZmHOX2a(1)
----------->
RAV1(1)
<---------
YAB1
--------->
ANAC46
<-----
-----------
GT1
<---------
TOE2(3)
--------->
YAB1
--------->
REM1(1)
<-----------
GT1
<------
-
ZmHOX2a(1)
--------------->
AGL15
--------->
YAB1
--------->
ANAC46
--------->
TOE1(2)
--------->
AHL20(2)
ttttacaaatgtaccttgttttaggaattaacgcgttaataatacaacatacaggctacatttatgatcgtatgatttacacctaattaattcttccgtt
12503600
<---------
ANAC46
<---------
ANAC58
--------->
AHL20(1)
--------->
ANAC46
--
<---------
AHL20(1)
----------->
GT1
--------->
ANAC58
--
--------->
ARR11(3)
--------->
AHL20(2)
--------->
ANAC58
<-
----
MYB52(1)
<---------
ANAC58
<---------
AHL20(2)
<---
-
GAMYB
--------->
AHL20(2)
<---------
AHL20(2)
<-------
TEIL
--------->
AHL20(2)
<-------
aagttctaaatatatagatgggtgtatatataaatagttatataagcccatacatacatgcttatattatatatagacgctattcaagtatttgtttatt
12503700
<---------
GLK1(2)
---------->
DOF2
--------->
ANAC58
--------->
ANAC58
--------->
YAB1
<----------
ID1
--------->
GLK1(2)
--------->
SPL7
<---------
ALFIN1
--------->
YAB1
------------->
AtSPL3
--------->
YAB1
*
TSS
------------->
AtSPL8
--------->
ANAC58
<---------
YAB1
--------->
DAG2
--------------
AtSPL3
--------->
ANAC58
--------->
YAB1
---------->
DOF2
--------
GT1
--------->
ARR14(2)
<---------
AHL20(2)
--------->
YAB1
--
AHL20(2)
--------->
HSFB2a(1)
--------->
AHL20(2)
------------>
CBF
--------->
TOE2(3)
ttcagtacgacaaagattcccactcggaatgttttaataatcttttatcatacaatttgttctctctctctctctctctctctctaccata
aagcaaatg
12503800
<---------
GLK1(2)
<---------
ARR11(3)
------>
ZmHOX2a(1)
--------->
ANAC46
<---------
ARR14(2)
<---------
GLK1(1)
---------->
DOF2
--------->
ARR11(3)
----------->
RAV1(1)
<--
---------->
DOF2
--------->
ARR14(2)
--------->
GLK1(1)
<----------
DOF2
---------->
DOF2
<---------------------
WRI1
---------->
DOF2
--------->
YAB1
--------->
MYB46(3)
<--
tgatcagagacaaagcatacaaagaagttcctcattcaaaaaagatttctcagccatcaaaattctctttctcttcatccaacaaaaaaaaagcatacct
12503900
<-------
TEIL
<------
ZmHOX2a(1)
<---------
TOE2(3)
------>
ZmHOX2a(2)
<---------
At4g35610
<---
--------->
At4g35610
------
--------->
ARR14(2)
<--------
<---------
ARR14(2)
--------->
CCA1(2)
<---------
TOE2(3)
--------->
At4g35610
<---------
ARR14(2)
--------
DOF2
<---------
AHL20(2)
<---------
At4g35610
--------->
ARR14(2)
-------
DAG2
----------->
GT1
--------->
YAB1
<---------
RAP2.6(2)
--------->
ARR11(1)
ctttttcttccatatagataagttaattaagaaaacgaattatcaggttttgtttcggctgatctgaggaagttcatct
atggatacggctcagtggcca
12504000
<----
------
<-----
<---------------
AtSPL8
------
--------------->
AtSPL3
<-----
--------------->
AtSPL8
<---------
At4g35610
<-----
<---------
AHL20(1)
--------->
At4g35610
------
--------->
ARR11(3)
<------
ZmHOX2a(2)
<-----
--------->
ZAT14
<---------
AHL20(2)
--------->
ARR11(3)
------
--------
RAV1(2)
--------->
ANAC55(2)
<---------
TOE2(3)
<<<<<<<<<
GATA-1
----->
RAV1(1)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
REM1(1)
<-----------
GT1
----
-
ZAT18
--------->
ANAC46
--------->
AHL20(2)
------->
TEIL
<---------
ARR11(3)
<------
cag
gtactatacacaaacatttacatatttatatattcgtacaattcaatatgtatgtgttgatgtagtttagatcatctgatttatctatctactagat
12504100
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
GLK1(1)
--------->
HSFB2a(1)
<---------
ARR14(2)
--------->
AHL20(2)
--
ZmHOX2a(2)
<-----------
ARR10
<---------
AHL20(2)
--->
ARR11(3)
--------->
ARR11(3)
<----------
DOF2
----
ARR14(3)
<---------
ARR11(3)
------>
ZmHOX2a(2)
--->
ARR14(3)
<---------
ARR11(1)
<------
ZmHOX2a(2)
----
ARR14(2)
<---------
CCA1(2)
<---------
ARR11(3)
----
AGP1
--------->
AHL20(2)
--------->
ARR11(3)
-------
--->
AGP1
--------->
YAB1
--------->
ARR14(2)
--------->
AGP1
--------->
AHL20(1)
----
ARR11(3)
<---------
ARR14(1)
<---------
ARR14(2)
--------->
ARR11(3)
--->
ARR14(2)
<---------
LBD16
<-----------
GT1
--------->
ARR14(2)
--------->
AHL20(2)
-->
ZmHOX2a(2)
<---------
TOE2(3)
<---------
TOE2(3)
<---------
AGP1
--------->
AHL20(2)
---
CCA1(2)
<---------
AHL20(2)
<----------
DOF2
<---------
CCA1(2)
<---------
AHL20(2)
cttgacttagaattttaatgttttcggatcttcttctttttgatgttactcttctcttcaacagtttttagatcttctcctttaattttaaatatatggt
12504200
--------->
YAB1
<---------
YAB1
<-----------
GT1
<---------
ICU4
<---------
DAG2
--------->
YAB1
<---------
AHL20(2)
--------->
ICU4
<----------
DOF2
<----------
DOF2
--------->
TOE2(3)
<-----------
GT1
<----------
DOF2
--------->
ARR11(3)
<---------
DAG2
<---------
ANAC58
<---------
ARR11(3)
------>
ZmHOX2a(2)
<-----------
GT1
<---------
AHL20(2)
--------->
CCA1(1)
<---------
ARR11(3)
<-----------
GT1
--------->
AHL20(2)
<---------
GLK1(2)
<---------
ATHB12
----
---->
GT1
<----------
DOF2
<---------
ANAC58
---------->
DOF2
--------->
RVE1(1)
--------->
ARR11(3)
tttttttttcactttaccctttattaatttgctttttcttttatgtttttagttaaagcttctctcaaatatctcaattatcattttgatcttgatgaaa
12504300
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AGI:
At4g24060.1
Description:
Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF4.6 (DOF4.6) [Arabidopsis Thaliana] (GB:Q8LAP8;GB:O22984;GB:Q94C22;GB:Q9SU49); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G64620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69473.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851)
Range:
from: 12503792
to: 12505656
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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