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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                     <---------DAG2                             ----
                                                   -------->P                          --------->ICU4
                                              <-----------GT1                        <---------ICU4
                                      <---------ANAC46         ------->TEIL          --------->YAB1
                             <---------TOE2(3)<---------AHL20(2)               <---------ANAC58 ----
   <-----------GT1--------->YAB1      <---------ANAC58        <---------CCA1(2)<---------ANAC58 ----
  --------->AHL20(2)--------->CCA1(2) <---------ANAC58<----------DOF2 <---------AHL20(2) <---------TOE2(3)
------->GT1 --------->ANAC55(1)<------ZmHOX2a(1)  <-----------GT1     --------->AHL20(2)<---------ICU4
 
agaaatttaacacacacttaatgatatggtttgaggaaatagcttatattaacttacctttccatgtatctatttatattttgcttaataataatgtaaa  12430900
                                           <---------MYB59                                        --
                                           --------->TOE2(3)                                     <--
                             --------->ARR11(3)                                                  ---
                             <---------ARR11(3)             --------->YAB1            --------->ANAC55(2)
                          <---------AHL20(2)          --------->ANAC58                <---------ANAC55(2)
       --------->AHL20(1) --------->AHL20(2)          --------->ANAC46                <---------O2<-
  --------->AHL20(2)----------->GT1  <---------AHL20(1)    <<<<<<<<<ARR1              --------->O2--
----->ANAC58     ---------->DOF2     --------->ARR11(3)    <<<<<<<<<ARR2  <---------ZAT18     ------
----->ANAC58<---------AHL20(2) --------->YAB1---------->DOF2--------->TOE2(3)    <---------CCA1(2)<-
----->ANAC46--------->AHL20(2) --------->TOE2(3)      --------->ANAC58   --------->YAB1 ----------->HVH21
 
cgcaataacatatattaaaacaaaggaaataaaatcttaatatatacctaaagttacacacaatcttagaatgctagcatactcaaatctcgtgaccccg  12431000
    --------->LBD16
   <---------HSFC1(1)
   --------->HSFC1(1)
   --------->HSFB2a(2)
   <---------HSFB2a(2)
  <---------LBD16                                                                      <---------YAB1
------->HSFC1(2)                                                                     --------->TOE2(3)
-------ARR14(2)                                                                      --------->YAB1
------>ARR14(2)               <---------MYB59                                      --------->ARR11(3)
--------HSFC1(2)              --------->TOE1(3)                              ----------->GT1
------->HSFB2a(1)             --------->TOE2(3)                  <-----------GT1   <---------ARR11(3)
--->LBD16                    ----------------->AG       --------->AtLEC2   <----------DOF2
--------HSFB2a(1)            =======================================================================
 
aattttctggaaaaatcaattctacttcttctacctaaacagtttaggcttacaaatccatccaaatttatccattcgctttgttaaatcttaattgagc  12431100
                  --------------->AGL15
                  <---------------AGL15
                 ----------------->AGL1
                 ----------------->AG
                 ----------------->AGL2
                 ----------------->AGL3
               <-----------GT1                                               --------->ICU4
            <---------MYB46(3)          --------->AHL20(2)              ----------->GT1
 <---------AHL20(1)            <------ZmHOX2a(2)                    ---------->DOF2
 --------->AHL20(2)           <---------ARR11(3)                   <---------WRKY12                -
 <---------AHL20(2)           --------->ARR11(3)                 <-----------HVH21        --------->ANAC46
 --------->AHL20(1)    ---------->DOF2  <---------AHL20(2)       --------->TOE2(3)      <-----------GT1
==================================MADS_MADS                     <----------ID1<---------ICU4     <--
 
ctaataaaataacatttgttaccaaaaaaagaagatcaactatataaatacacttccattaacaaaaacgtcaaagggtaattaagacaattcacaacat  12431200
                                       -------->ATHB1
                                       <--------HAHB4
                                       <---------AHL20(2)
                                       --------->ATHB51
               ------>MYB46(1)        --------->ICU4
             --------->AtMYB61        <---------ATHB12
             <---------MYB59          <---------ATHB51
             ===========================MYC_MYB
             ------->GAMYB     >>>>>>>>>>ABI5
           --------->ANAC58    >>>>>>>>>>BZIP12
           --------->ANAC58   <---------ANAC55(2)
       --------->ANAC58       <---------O2
       --------->ANAC46       --------->bZIP60(2)
       --------->ANAC58       --------->TGA1a
    --------->KAN4(2)         <---------TGA1a
    <---------ARR14(2)        --------->ANAC58
    --------->ARR14(2)        --------->ANAC58
   <----------TaMYB80         --------->O2 <-----------GT1
   --------->KAN4(1)     ------>ZmHOX2a(1)<-----------GT1
  ---------->TaMYB80 --------->ARR14(2)<---------ICU4
  <---------KAN4(2)  <---------ARR14(2)--------->AHL20(2)                                    -------
  --------->ARR14(2)------>MYB83  ------------>CBF                                      --------->YAB1
<---------MYB52(1)  ------>MYB46(1) --------->WOX13(1)                                *TSS ---------
-------->LBD16 ------>MYB83   --------->ANAC55(2)      <-----------GT1               <---------GLK1(1)
-------LBD16--------->MYB46(3)--------->ANAC46------>ZmHOX2a(1)                ----------->GT1     <
 
tccggtatattcgcaaccaaaccaaatcctgccacgtagcaattatttcctcttcatttttctctctgtctccctcgaagaaacgtagaaatcagaaagt  12431300
                                                                                                   <
                                                                                                   <
                                                                                         --------->HSFB2a(1)
                                                                                         <---------HSFB2a(1)
                            <-----------GT1          --------->ANAC58                    --------->HSFC1(2)
     ----------->GT1   --------->HSFB2a(2)           --------->ANAC58                    <---------HSFC1(2)
--------->YAB1         <---------HSFB2a(2)           --------->ANAC46           <---------GLK1(2) <-
---->GT1   <---------ARR14(2)          --------->At4g35610 --------->AHL20(2) --------->LBD16     <-
->DOF2     --------->ARR14(2)          <---------At4g35610 --------->YAB1    <---------HSFB2a(2)  --
---------ATHB12  <----------DOF2 <----------DOF2   ---------->DOF2           --------->HSFB2a(2)<---
 
aaatcatacagtcaaaaccgcttcttctataaaaccctttttagctcaatcccaaaacgcaataaaaaacaaaacgctctccagaatttcgaaacttcta  12431400
                                                      ------>NtERF2
                                                    --------->ATERF1(1)
                                                    <------NtERF2
                                                   <---------At4g35610
                                                   --------->ABI4(2)
                                                   --------->At4g35610
                                                   <---------ATERF1(1)
                                                   ------>NtERF2
                                                  <---------DEAR3(1)
                                                 --------->ATERF1(1)
                                                 <------NtERF2
                                                 --------->RAP2.3(1)
                                                <---------ATERF1(1)
                                                <---------ORA47(2)
                                                ------>NtERF2
                                                <---------RAP2.6(1)
                                                <---------RAP2.3(1)
                                                <---------ERF1
                                                <---------DEAR4(2)
                                                <---------RRTF1(1)
                                               <---------ATERF1(2)
                                               <---------RRTF1(2)
                                               --------->ATERF1(2)
                                               <---------RRTF1(3)
                                               <---------RAP2.3(2)
                                               <---------RAP2.3(3)                                --
                                               --------->DEAR3(1)                                 <-
                                               <---------DEAR3(1)                                <--
                                              <---------ABI4(1)                                 ----
                                              --------->ATERF1(1)                               <---
---------RVE1(1)                            <---------ATERF1(2)                                -----
---------CCA1(1)                            --------->ATERF1(2)                         <----------DOF2
--------AHL20(1)                           --------->DEAR3(2)                          <---------ANAC46
--------ARR11(3)         <---------ANAC46  <---------LBD16                             <---------ANAC58
------->ARR11(3)      <---------DEAR3(1)  --------->MYB52(1)                           <---------ANAC58
------TOE2(3)     <---------TOE2(3)   <---------MYB46(3) <----------DOF2           <---------At4g35610
 
agatattttgttttctctcttaacgatggcgaagagtgttttggttaccggcggcgctggctatatcggaagtcatactgttcttcaactgcttgaaggt  12431500
         <------NtERF2                                                                --------->DEAR3(1)
        ------>NtERF2                                                              <---------ARR14(2)
       --------->RAP2.3(2)                                                         --------->ARR14(2)
       --------->DEAR3(1)                                                      --------->ANAC58
       --------->RAP2.3(3)                                                     --------->ANAC58
       --------->RRTF1(3)                                                    --------->MYB52(1)
      --------->ATERF1(1)                                                   <---------ARR14(2)
      --------->RAP2.3(1)                                               <------NtERF2 ------->GAMYB
     ------>NtERF2                                                      --------->RAP2.3(1)
     --------->LBD16                              ---------->CDC5      <---------ATERF1(1)
     <---------ATERF1(1)                        <----------DOF2       <---------DEAR3(1)
    --------->ANAC46                            <-----------HVH21     --------->DEAR3(1)
    --------->DEAR3(1)                <---------At4g35610             <---------ATERF1(2)
   <---------LBD16                    --------->ZAT2                  --------->ATERF1(2)
------->ARR14(2)                      <---------ZAT2                 <---------LBD16 --------->DEAR3(2)
--------ARR14(2)       --------->YAB1 --------->At4g35610            --------->ATERF1(1)
-----GAMYB<---------MYB46(3)       ------>ZmHOX2a(1)<---------At4g35610------>NtERF2 --------->MYB46(3)
------->GT1  <---------MYB46(3)    <---------At4g35610 <---------ANAC46--------->LBD16--------->RAP2.6(2)
------MYB46(3)         <---------ICU4<-----------RAV1(1)  --------->REM1(2) --------->ARR14(2) -----
---->ALFIN1<-------GAMYB <----------ID1  <---------At4g35610        <---------ATERF1(1)  <---------ALFIN1
 
ggttactccgccgtcgttgttgacaattacgacaattcctctgctgcttcgcttcagcgcgtgaagaaactcgccggcgaaaacggaaaccgcctctcct  12431600
                                                                            <----------DOF2
                                                                           <---------ANAC58
                                                                      <-------MYC3
                                                                     <---------ANAC58
                                                                     --------->O2
                                   ----------->GT1                   --------->TGA1a
                                <---------ARR14(2)                   <---------O2
                             --------->ANAC46                        <---------ANAC46
                            --------->At4g35610                      <---------ANAC55(1) <---------CCA1(2)
              <---------ANAC58  --------->ARR14(2)                   <---------ANAC58  <---------ANAC46
     --------->GLK1(2)      ------>NtERF2                        <------ZmHOX2a(1)     <---------ANAC58
     --------->ARR14(2)     --------->LBD16                    <---------TOE2(3)       <---------ANAC55(2)
     <---------ARR14(2)     <---------LBD16               <------MYB46(1)  <---------ANAC58 --------
    <---------GLK1(2)       <---------At4g35610   <---------At4g35610<---------TGA1a   <---------ANAC58
 <-----------RAV1(2)      <---------LBD16<---------GLK1(2)<------MYB83------->MYC3     --------->ANAC55(2)
->ZmHOX2a(1)  <---------ANAC58--------->LBD16     --------->At4g35610==================bZIP_DOF
 
tccaccaggttctgttttcgttctctctctccgcggaaatgaaaaattctcggtgctgatttggtttaggaaacgtgtgcttgaagaatttcgtatcatc  12431700
                                                                  <---------ICU4
                                                                  --------->YAB1
                                                            --------->ANAC46
                                                         <---------ZAT14
                                                       --------->ZAT18
                                                       <---------ZAT18
                                                       --------->ZAT14                       -------
                                 <-----------RAV1(1)   --------->REM1(2)                   ---------
                           --------->ZAT14             <---------ZAT14                --------->bZIP60(1)
                           <---------ZAT14           <---------------AtSPL8           <---------bZIP60(1)
                           --------->ZAT18           --------------->AtSPL8      --------->YAB1
                         --------->ZAT14            <---------ANAC58       --------->ANAC55(2)
                         <---------ZAT18            <---------ANAC46       <---------ANAC55(2)
               >>>>>>>>>GT-1--------->ZAT6          <---------ANAC58<---------YAB1<---------TOE2(3)-
->YAB1      ----------->GT1<---------ZAT18      <----------DOF2  --------->ICU4 --------->ICU4 -----
 
gttttcatatggttctggttaatatttgtgtacactatgtggctaagttttctttgtgtgtacacataatcatgaattaagtattgatgatgccatgtga  12431800
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AGI:  At4g23920.1   
Description:  UGE2 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 2); UDP-glucose 4-epimerase/ protein dimerization. Identical to Probable UDP-glucose 4-epimerase At4g23920 [Arabidopsis Thaliana] (GB:Q9T0A7); similar to UGE5 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 5), UDP-glucose 4-epimerase/ protein dimerization [Arabidopsis thaliana] (TAIR:AT4G10960.1); similar to unknown [Populus trichocarpa] (GB:ABK95303.1); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:  from: 12431287    to: 12433874    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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