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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
DAG2
----
-------->
P
--------->
ICU4
<-----------
GT1
<---------
ICU4
<---------
ANAC46
------->
TEIL
--------->
YAB1
<---------
TOE2(3)
<---------
AHL20(2)
<---------
ANAC58
----
<-----------
GT1
--------->
YAB1
<---------
ANAC58
<---------
CCA1(2)
<---------
ANAC58
----
--------->
AHL20(2)
--------->
CCA1(2)
<---------
ANAC58
<----------
DOF2
<---------
AHL20(2)
<---------
TOE2(3)
------->
GT1
--------->
ANAC55(1)
<------
ZmHOX2a(1)
<-----------
GT1
--------->
AHL20(2)
<---------
ICU4
agaaatttaacacacacttaatgatatggtttgaggaaatagcttatattaacttacctttccatgtatctatttatattttgcttaataataatgtaaa
12430900
<---------
MYB59
--
--------->
TOE2(3)
<--
--------->
ARR11(3)
---
<---------
ARR11(3)
--------->
YAB1
--------->
ANAC55(2)
<---------
AHL20(2)
--------->
ANAC58
<---------
ANAC55(2)
--------->
AHL20(1)
--------->
AHL20(2)
--------->
ANAC46
<---------
O2
<-
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(1)
<<<<<<<<<
ARR1
--------->
O2
--
----->
ANAC58
---------->
DOF2
--------->
ARR11(3)
<<<<<<<<<
ARR2
<---------
ZAT18
------
----->
ANAC58
<---------
AHL20(2)
--------->
YAB1
---------->
DOF2
--------->
TOE2(3)
<---------
CCA1(2)
<-
----->
ANAC46
--------->
AHL20(2)
--------->
TOE2(3)
--------->
ANAC58
--------->
YAB1
----------->
HVH21
cgcaataacatatattaaaacaaaggaaataaaatcttaatatatacctaaagttacacacaatcttagaatgctagcatactcaaatctcgtgaccccg
12431000
--------->
LBD16
<---------
HSFC1(1)
--------->
HSFC1(1)
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
LBD16
<---------
YAB1
------->
HSFC1(2)
--------->
TOE2(3)
-------
ARR14(2)
--------->
YAB1
------>
ARR14(2)
<---------
MYB59
--------->
ARR11(3)
--------
HSFC1(2)
--------->
TOE1(3)
----------->
GT1
------->
HSFB2a(1)
--------->
TOE2(3)
<-----------
GT1
<---------
ARR11(3)
--->
LBD16
----------------->
AG
--------->
AtLEC2
<----------
DOF2
--------
HSFB2a(1)
=======================================================================
aattttctggaaaaatcaattctacttcttctacctaaacagtttaggcttacaaatccatccaaatttatccattcgctttgttaaatcttaattgagc
12431100
--------------->
AGL15
<---------------
AGL15
----------------->
AGL1
----------------->
AG
----------------->
AGL2
----------------->
AGL3
<-----------
GT1
--------->
ICU4
<---------
MYB46(3)
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(1)
<------
ZmHOX2a(2)
---------->
DOF2
--------->
AHL20(2)
<---------
ARR11(3)
<---------
WRKY12
-
<---------
AHL20(2)
--------->
ARR11(3)
<-----------
HVH21
--------->
ANAC46
--------->
AHL20(1)
---------->
DOF2
<---------
AHL20(2)
--------->
TOE2(3)
<-----------
GT1
==================================
MADS_MADS
<----------
ID1
<---------
ICU4
<--
ctaataaaataacatttgttaccaaaaaaagaagatcaactatataaatacacttccattaacaaaaacgtcaaagggtaattaagacaattcacaacat
12431200
-------->
ATHB1
<--------
HAHB4
<---------
AHL20(2)
--------->
ATHB51
------>
MYB46(1)
--------->
ICU4
--------->
AtMYB61
<---------
ATHB12
<---------
MYB59
<---------
ATHB51
===========================
MYC_MYB
------->
GAMYB
>>>>>>>>>>
ABI5
--------->
ANAC58
>>>>>>>>>>
BZIP12
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC58
<---------
O2
--------->
ANAC46
--------->
bZIP60(2)
--------->
ANAC58
--------->
TGA1a
--------->
KAN4(2)
<---------
TGA1a
<---------
ARR14(2)
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC58
<----------
TaMYB80
--------->
O2
<-----------
GT1
--------->
KAN4(1)
------>
ZmHOX2a(1)
<-----------
GT1
---------->
TaMYB80
--------->
ARR14(2)
<---------
ICU4
<---------
KAN4(2)
<---------
ARR14(2)
--------->
AHL20(2)
-------
--------->
ARR14(2)
------>
MYB83
------------>
CBF
--------->
YAB1
<---------
MYB52(1)
------>
MYB46(1)
--------->
WOX13(1)
*
TSS
---------
-------->
LBD16
------>
MYB83
--------->
ANAC55(2)
<-----------
GT1
<---------
GLK1(1)
-------
LBD16
--------->
MYB46(3)
--------->
ANAC46
------>
ZmHOX2a(1)
----------->
GT1
<
tccggtatattcgcaaccaaaccaaatcctgccacgtagcaattatttcctcttcatttttctctctgtctccctcgaagaaacgt
agaaatcagaaagt
12431300
<
<
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<-----------
GT1
--------->
ANAC58
--------->
HSFC1(2)
----------->
GT1
--------->
HSFB2a(2)
--------->
ANAC58
<---------
HSFC1(2)
--------->
YAB1
<---------
HSFB2a(2)
--------->
ANAC46
<---------
GLK1(2)
<-
---->
GT1
<---------
ARR14(2)
--------->
At4g35610
--------->
AHL20(2)
--------->
LBD16
<-
->
DOF2
--------->
ARR14(2)
<---------
At4g35610
--------->
YAB1
<---------
HSFB2a(2)
--
---------
ATHB12
<----------
DOF2
<----------
DOF2
---------->
DOF2
--------->
HSFB2a(2)
<---
aaatcatacagtcaaaaccgcttcttctataaaaccctttttagctcaatcccaaaacgcaataaaaaacaaaacgctctccagaatttcgaaacttcta
12431400
------>
NtERF2
--------->
ATERF1(1)
<------
NtERF2
<---------
At4g35610
--------->
ABI4(2)
--------->
At4g35610
<---------
ATERF1(1)
------>
NtERF2
<---------
DEAR3(1)
--------->
ATERF1(1)
<------
NtERF2
--------->
RAP2.3(1)
<---------
ATERF1(1)
<---------
ORA47(2)
------>
NtERF2
<---------
RAP2.6(1)
<---------
RAP2.3(1)
<---------
ERF1
<---------
DEAR4(2)
<---------
RRTF1(1)
<---------
ATERF1(2)
<---------
RRTF1(2)
--------->
ATERF1(2)
<---------
RRTF1(3)
<---------
RAP2.3(2)
<---------
RAP2.3(3)
--
--------->
DEAR3(1)
<-
<---------
DEAR3(1)
<--
<---------
ABI4(1)
----
--------->
ATERF1(1)
<---
---------
RVE1(1)
<---------
ATERF1(2)
-----
---------
CCA1(1)
--------->
ATERF1(2)
<----------
DOF2
--------
AHL20(1)
--------->
DEAR3(2)
<---------
ANAC46
--------
ARR11(3)
<---------
ANAC46
<---------
LBD16
<---------
ANAC58
------->
ARR11(3)
<---------
DEAR3(1)
--------->
MYB52(1)
<---------
ANAC58
------
TOE2(3)
<---------
TOE2(3)
<---------
MYB46(3)
<----------
DOF2
<---------
At4g35610
agatattttgttttctctcttaacg
atggcgaagagtgttttggttaccggcggcgctggctatatcggaagtcatactgttcttcaactgcttgaaggt
12431500
<------
NtERF2
--------->
DEAR3(1)
------>
NtERF2
<---------
ARR14(2)
--------->
RAP2.3(2)
--------->
ARR14(2)
--------->
DEAR3(1)
--------->
ANAC58
--------->
RAP2.3(3)
--------->
ANAC58
--------->
RRTF1(3)
--------->
MYB52(1)
--------->
ATERF1(1)
<---------
ARR14(2)
--------->
RAP2.3(1)
<------
NtERF2
------->
GAMYB
------>
NtERF2
--------->
RAP2.3(1)
--------->
LBD16
---------->
CDC5
<---------
ATERF1(1)
<---------
ATERF1(1)
<----------
DOF2
<---------
DEAR3(1)
--------->
ANAC46
<-----------
HVH21
--------->
DEAR3(1)
--------->
DEAR3(1)
<---------
At4g35610
<---------
ATERF1(2)
<---------
LBD16
--------->
ZAT2
--------->
ATERF1(2)
------->
ARR14(2)
<---------
ZAT2
<---------
LBD16
--------->
DEAR3(2)
--------
ARR14(2)
--------->
YAB1
--------->
At4g35610
--------->
ATERF1(1)
-----
GAMYB
<---------
MYB46(3)
------>
ZmHOX2a(1)
<---------
At4g35610
------>
NtERF2
--------->
MYB46(3)
------->
GT1
<---------
MYB46(3)
<---------
At4g35610
<---------
ANAC46
--------->
LBD16
--------->
RAP2.6(2)
------
MYB46(3)
<---------
ICU4
<-----------
RAV1(1)
--------->
REM1(2)
--------->
ARR14(2)
-----
---->
ALFIN1
<-------
GAMYB
<----------
ID1
<---------
At4g35610
<---------
ATERF1(1)
<---------
ALFIN1
ggttactccgccgtcgttgttgacaattacgacaattcctctgctgcttcgcttcagcgcgtgaagaaactcgccggcgaaaacggaaaccgcctctcct
12431600
<----------
DOF2
<---------
ANAC58
<-------
MYC3
<---------
ANAC58
--------->
O2
----------->
GT1
--------->
TGA1a
<---------
ARR14(2)
<---------
O2
--------->
ANAC46
<---------
ANAC46
--------->
At4g35610
<---------
ANAC55(1)
<---------
CCA1(2)
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC58
<---------
ANAC46
--------->
GLK1(2)
------>
NtERF2
<------
ZmHOX2a(1)
<---------
ANAC58
--------->
ARR14(2)
--------->
LBD16
<---------
TOE2(3)
<---------
ANAC55(2)
<---------
ARR14(2)
<---------
LBD16
<------
MYB46(1)
<---------
ANAC58
--------
<---------
GLK1(2)
<---------
At4g35610
<---------
At4g35610
<---------
TGA1a
<---------
ANAC58
<-----------
RAV1(2)
<---------
LBD16
<---------
GLK1(2)
<------
MYB83
------->
MYC3
--------->
ANAC55(2)
->
ZmHOX2a(1)
<---------
ANAC58
--------->
LBD16
--------->
At4g35610
==================
bZIP_DOF
tccaccag
gttctgttttcgttctctctctccgcggaaatgaaaaattctcggtgctgatttggtttaggaaacgtgtgcttgaagaatttcgtatcatc
12431700
<---------
ICU4
--------->
YAB1
--------->
ANAC46
<---------
ZAT14
--------->
ZAT18
<---------
ZAT18
--------->
ZAT14
-------
<-----------
RAV1(1)
--------->
REM1(2)
---------
--------->
ZAT14
<---------
ZAT14
--------->
bZIP60(1)
<---------
ZAT14
<---------------
AtSPL8
<---------
bZIP60(1)
--------->
ZAT18
--------------->
AtSPL8
--------->
YAB1
--------->
ZAT14
<---------
ANAC58
--------->
ANAC55(2)
<---------
ZAT18
<---------
ANAC46
<---------
ANAC55(2)
>>>>>>>>>
GT-1
--------->
ZAT6
<---------
ANAC58
<---------
YAB1
<---------
TOE2(3)
-
->
YAB1
----------->
GT1
<---------
ZAT18
<----------
DOF2
--------->
ICU4
--------->
ICU4
-----
gttttcatatggttctggttaatatttgtgtacactatgtggctaagttttctttgtgtgtacacataatcatgaattaagtattgatgatgccatgtga
12431800
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AGI:
At4g23920.1
Description:
UGE2 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 2); UDP-glucose 4-epimerase/ protein dimerization. Identical to Probable UDP-glucose 4-epimerase At4g23920 [Arabidopsis Thaliana] (GB:Q9T0A7); similar to UGE5 (UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 5), UDP-glucose 4-epimerase/ protein dimerization [Arabidopsis thaliana] (TAIR:AT4G10960.1); similar to unknown [Populus trichocarpa] (GB:ABK95303.1); contains InterPro domain UDP-glucose 4-epimerase; (InterPro:IPR005886); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040)
Range:
from: 12431287
to: 12433874
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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