Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->HSFC1(2)       --------->HSFB2a(1)       <---------HSFC1(2)       <------MYB46(1)       <---------HSFB2a(1)      --------------->AtSPL8                               <---------HSFB2a(2)      --------------->AtSPL3                  <---------ANAC58      <---------------AtSPL3                  <---------ANAC46      <---------------AtSPL8                  <---------ANAC58 --------MYB46(3)                          <---------WOX13(1)                <---------ANAC58 -----MYB46(3)                           --------->ATHB12  <---------LBD16   <---------ANAC58 -GAMYB<------MYB83                ------->TEIL<----------DOF2    <---------YAB1 ----RAV1(1)         <---------AHL20(2) <---------YAB1     --------->HSFB2a(2)<----------DOF2   gttgttggaaggtaccattctatttttatgacatatgtatatatgattgcttgtctgttttctcggagattatagttttgcttttgttttttgggaaatt  12426200                                                                                     --------->ZAT6                                                <------ZmHOX2a(2)                <---------ANAC58                                               <---------ARR11(3)                <---------ANAC58                                      ---------->DOF2                         <---------CCA1(2)                                   <---------At4g35610                  --------->ARR11(3) <------ZmHOX2a(1)                 --------->At4g35610                  <---------ARR11(3)   gcaggaacattatacatggaagcgatggaccagagacagctaaagacgagatcagcttgtggtttaagcctgaagaactcgtttcttacactagtaacgc  12426300                   <---------ARR14(2)                   --------->ARR14(2)                                        <-----------GT1         ------>ZmHOX2a(2)                                                <---------ICU4        <---------GLK1(1)                                                 --------->YAB1       <---------AGP1                                                    --------->AHL20(2)       --------->ARR14(2)                                                --------->ICU4       <---------ARR11(3)                                                <---------ATHB51       <---------ARR14(2)                                              --------->YAB1       <-----------ARR10                                 <---------MYB52(1)  <---------AHL20(2)       --------->ARR11(3)           <----------DOF2     <-----------HVH21<---------AHL20(2)    <-----    --------->ALFIN1   --------->ZAT14      <---------MYB52(1)<------ZmHOX2a(2)    <----------DOF2   tgagaagtggatctacggccagaactgaactattccctctttctcccttattttcaaccgttagatcagacataaataattacttcttttgttttttctt  12426400                                                                                       <-------MYC3                                                                                       <-------PIF5                                                                                       <-------MYC2                                                                                       ------->MYC2                                                                                       ------->MYC3                                                                                       ------->PIF5                                                                                       <-------MYC4                                                                                       ------->MYC4                                                                                      ===============                                                                                      <---------TGA1a                                                                                      --------->O2                                                                                      <---------O2                                                                                      --------->TGA1a                                                                                      <--------ABF1 -                     --------->LBD16                                                  <---------ANAC55(2)                    <---------ANAC46                                                  <---------ANAC46                    <---------LBD16                                       --------->AHL20(2)      <--                   <---------LBD16                                        --------->YAB1--------->ALFIN1                  ------->TEIL                                      --------->ANAC46<------------OsbHLH66                  --------->MYB52(1)<---------At5g28300      <---------YAB1     --------->MYB59   --- -----DOF2      <---------SPL7     <-----------GT1        ---------->ID1 <---------ATHB12      <-----   ttacccaaacactgaaaacgtaccgggaataacaaatttactgcatttgttatcaagtttgttctaatagacccaatgaaattaggccacgtgtgcgatc  12426500                                                                                      --------->YAB1                                                                              <---------ATERF1(1)                                                                              ------>NtERF2                                                                             --------->RAP2.3(3)                                                                             --------->DREB2C(2)              <---------MYB52(1)                                             --------->DEAR3(1)          <---------At5g28300                                               --------->ORA47(2)       <----------DOF2                                                      --------->RAP2.3(1) <-----------GT1            <---------GLK1(1)                              --------->At4g35610 =================bZIP_DOF  --------->GLK1(1)                              ------>NtERF2    <-------- ---------->HVH21   <---------ZAT18                     <---------AHL20(2) <---------ATERF1(1)      - -------ANAC55(2)   --------->ZAT18             --------->ICU4         --------->ARR14(2)   --------- ------>ANAC55(2)<---------ANAC46               <-----------RAV1(1)    <---------ARR14(2)--------->AHL20(2) -ZmHOX2a(2)--------->TOE2(3)              --------->YAB1             *TSS --------->LBD16<---------AHL20(2)   atgtaaccggtttaccgtaatgtggacttgaaatccgattagcaagcgtaatgttgttttaatttctcgttggaatccgccgactccattataaaatctc  12426600                    --------->WRKY38(1)                    --------->WRKY12           --------->At4g35610           <---------At4g35610         <-----------RAV1(2)                                                            ---------->ID1 -ARR11(3) <---------ZAT2                                                    --------->YAB1 -------->ZAT14<---------ANAC46                         <---------At4g35610 <------ZmHOX2a(2) >ARR11(3) --------->ZAT2      <---------At4g35610  <----------DOF2         <---------ATHB12<--------   agagaactagttcagctgcgagttgactcgttcatcggcttcttcagaacgatactttagcttcgacctctctctccgatcatcttcttcgtcgctttcc  12426700                               <---------ICU4                              <---------YAB1                    <-------TEIL                 <---------HSFB2a(1)                  <---------ANAC58                 <---------HSFC1(2)                   <---------ANAC58             <---------ANAC58                 --------->HSFB2a(1)               <----------DOF2                 <---------ANAC58   ----------------------->TaNAC69(2)           ------>ZmHOX2a(1)             <---------YAB1 <---------ATHB12--------->HSFC1(2)         <---------ARR14(2)          <---------TOE2(3) --DOF2       <---------AtLEC2--------->ICU4--------->ARR14(2)    ------>ZmHOX2a(1)<---------ANAC46   ctaatcgttttctcttgcaaggttcttacttcataattcgtaagagtttcctcctttcttgacgagtcctgatataggttttgattcgtgttcaattgaa  12426800                            --------->LBD16                           <---------HSFB2a(2)                           <---------LBD16                                                      -----                          <---------ANAC46                                               <---------ARR14(2)                          <---------LBD16                           --------->AHL20(2)   --------->ARR14(2)                        --------->GLK1(2)                           <---------AHL20(2)--------->LBD16                  <---------LBD16                                  --------->AHL20(2)<---------LBD16             <---------ANAC58          --------->TOE2(3)    <---------ANAC58         --------->LBD16             <---------ANAC58          --------->ANAC55(2)  <---------ANAC58        <---------ANAC46   <---------TOE2(3)   --------->ARR14(2)                 <---------YAB1      <---------ARR11(3)-----   <---------TOE1(3)   <---------ARR14(2)<---------AHL20(2)--------->ATHB12<----------DOF2    <------   ttgttagggtttagtgcttctcagggattcggggaacatatacttaattgttttcatttcatgcttggattaaatttctttatcttccctggattcgatt  12426900     <---------ARR11(3)    <---------CCA1(2)  <----------DOF2  <---------DAG2 --------->TOE2(3)                                 ------->GAMYB ---->HSFB2a(1)                                 --------->MYB52(1) ---->HSFC1(2)     <-----------GT1           --------->YAB1                                   <------ ---GLK1(2)<---------CCA1(2)             <---------YAB1        --------->ATHB12  ---------->DOF2   cttcctttatcttctatcttttgactctcttgactaatttctcactattgtaacggagttttgtttgatttgtgtcaaatttttaaagaacagtgtataa  12427000                                                <----------DOF2                                               <---------ANAC58         ----------->GT1                       <---------ANAC58                       <---------ANAC46         <---------ANAC46                 --------->GLK1(2) <---------At4g35610      <---------LBD16    --------->ANAC55(2)              ---------->DOF2        --------->At4g35610   ---------->DOF2 ---AHL20(2)   ---------->DOF2    --------->At5g28300    <---------ZAT18     <---------ALFIN1    <---   tttcttacatatcgtataaaagtttgtgtttttttcggtaaaagaatttgctttgtttgtgcagatggagactggaacaccacttatagcggagaccatt  12427100  Previous    Next  AGI:  At4g23900.1    Description:  nucleoside diphosphate kinase 4 (NDK4). Identical to Nucleoside diphosphate kinase IV, chloroplast/mitochondrial precursor (NDK4) [Arabidopsis Thaliana] (GB:Q8LAH8;GB:Q9T0A5); similar to NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3), ATP binding / nucleoside diphosphate kinase [Arabidopsis thaliana] (TAIR:AT4G11010.1); similar to putative nucleoside diphosphate kinase III [Thlaspi caerulescens] (GB:AAY18431.1); contains InterPro domain Nucleoside diphosphate kinase, core; (InterPro:IPR001564) Range:  from: 12424461    to: 12426538    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g23910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10970.4); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10970.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10970.2); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD05314.1) Range:  from: 12426570    to: 12429382    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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