Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->AHL20(2)                                                          <---------AHL20(2)                                                         --------->YAB1             ---------->DOF2                            =============================================          <---------YAB1                                <---------YAB1                   <---------ANAC58        --------->YAB1                                  <---------------AGL15            <---------ANAC58       <---------YAB1    <---------AHL20(2)          --------->AHL20(1)           --------->AHL20(2)-      --------->AHL20(2) --------->ATHB12            --------->AHL20(2)         <----------DOF2  <--- -------->YAB1          <---------YAB1               <---------AHL20(2)   <---------ARR14(2)  <------ ---------->GT1     --------->GLK1(2)---------->DOF2--------->AHL20(2)    --------->ARR14(2)  -------   aatagtaatattataaaaagagaatatttattgatgccaaaaagaaaccaagaattttattaaaatggtagaagtcgatatgctttaaatgccttgagct  12366000                                                             <---------AHL20(2)                                                             --------->AHL20(2)        --------->ANAC58                   <---------------AGL15                      <-----------GT1        --------->ANAC58                  <-----------------AG                    --------->AHL20(2)   <---------YAB1                      <---------MYB59   --------->AHL20(2)       <---------AHL20(1) <---------ICU4                  ------->TEIL          ----------->GT1         <---------ICU4 ==========================================================MADS_MADS          <---------YAB1 -------->ICU4                   --------->ARR14(2)   ----------->GT1         --------->ICU4 ----TEIL                        <---------ARR14(2) <--------P<---------ICU4--------->YAB1         <- ---At4g35610                 <---------ANAC55(2) <------MYB46(1)<-----------GT1  <---------AHL20(2) -->At4g35610                 --------->ANAC55(2) <------MYB83--------->AHL20(2)  --------->AHL20(1)   tcattatgacaagtactacaaaacaaaaaaaaacgtatttgcctaatacatttggtaagttaaataatttccttcttaacataattaattactatatcgt  12366100                          -------->P                        --------->MYB46(3)                    <---------AHL20(2)                    --------->AHL20(2) --------->ARR11(3)                   <---------ATHB12    <---------ARR11(3)             <---------WRKY18(1)      <---------CCA1(2)            --------->WRKY45      <---------ANAC46            --------->WRKY12      <---------ANAC55(2)                                         <------            ----------->HVH21  --------->ARR14(2)                                         <---------AHL20(2)            --------->WRKY38(1)<---------MYB52(1)         --------->MYB52(1)             --------->AHL20(2)           --------->DOF5.7(2) <---------ARR14(2)         <-----------GT1                <---------AHL20(2)         <---------ANAC46 --------->MYB52(1)   <-------TEIL   ----------->GT1        <---------YAB1 ---------DOF2   --------->WOX13(1)  ------->TEIL      --------->TOE2(3)       <---------TOE2(3)   tctttttgttagcgttgaccaattaaacaaccggttatgtatatctcggttcagaaaacttaaccggtttaacaaatagctaatgttccgattaatttac  12366200                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                              <------                                                                                              <------                                                           --------->TOE1(3)                  -------                                                           --------->TOE2(3)               <---------TOE1(2)                                                      <-------TEIL                         --------->LBD16                                 <---------ARR11(3)  --------->CCA1(2)                   <-----------                     ----------->GT1            ---------->DOF2                        --------->PCF5                   <----------DOF2<------ZmHOX2a(2) --------->ARR11(3)      --------->DAG2<------NtERF2 -----GT1   ------->TEIL         --------->ARR11(3) --------->ARR11(1)     ---------->DOF2<---------LBD16   attacttcagaacgaatcgaactttgtaaaacgaagatcgattacaaattgaaagatacagccttaatttggcattaaaaagttcaatggtccccggttc  12366300                   <-------TEIL                <---------ANAC55(2)                --------->ANAC58                <---------ANAC58                <---------ANAC58                                                              <------                --------->ANAC58                                                             <-------               --------->SPL7         -------->P--------------->AGL15                   <-----------HVH21               <-------TEIL           ------>MYB46(1)                                   <-----------TGA1       <-----------GT1              --------->DEAR3(1)                                 <---------O2       --------->MYB52(1)           <---------MYB111(1)                                --------->TGA1a   <---------AHL20(2)               <---------MYB111(2)                                --------->O2  --------->AHL20(2)                --------->AtMYB61                                  ============== ---MYB83<---------LBD16            <---------MYB46(2)                                 --------->ANAC46 ---MYB46(1)   <---------------AtSPL3 ------>MYB83   ============================================bZIP_DOF ------->GT1   --------------->AtSPL3--------->MYB55(1)                                --------->bZIP60(2) ---->MYB59--------->LBD16          <---------MYB55(2)                        --------->ARR14(2) ---MYB52(1)  <--------P   --------->MYB52(1)   <---------------AGL15         <---------ARR14(2) ---ARR14(2) <---------ARR14(2)     --------->MYB46(3)     ------------>CBF   <---------ARR11(3) -->ARR14(2) --------->ARR14(2)<-----------HVH21----------->GT1               --------->ARR11(3)   -- ------AGL1<---------------AtSPL3  --------->MYB46(3)---------->DOF2          <-----------ARR10 *TSS<   ggtattaaataaccgggtacgtacagactcaccggtcaccaacctgtaaaccgtataaagaaacaatagagtcgcatcagtatcttccctcgtcactttc  12366400                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           <---------                                                                                          <-------GAMYB                                                          <---------ARR11(3)             <---------MYB46(3)   <----------DOF2                         <---------ANAC46                              <---------DEAR3(2) ------>MYB46(1)                           <---------ANAC58                             <---------DREB2C(2) ------>MYB83                              <---------ANAC58                             <---------ANAC46 -----HVH21                     --------->AHL20(2)  --------->YAB1                      <---------DEAR3(1) ---DOF2  ------------------------>ANAC81 <---------MYB46(3)                            <---------ANAC58 ===bZIP_DOF           <----------ID1   <---------MYB52(1)--------->ARR11(3)            <---------ANAC58 ------->MYB46(3)    --------->YAB1<---------ARR14(2)   --------->ANAC58                <---------RAP2.6(2) ---------ALFIN1--------->AHL20(2) --------->ARR14(2)   --------->ANAC58        <----------DOF2   acccactttaatatgccaaaaaataagaacaaaattatatccgttgcttgaaaatcacaagctcttcttaacttcacaagtgcttcaatggcggttcttc  12366500                                                                                           <---------HSFB2a(2)            <---------ANAC55(2)                                                      <---------GLK1(2)            --------->ANAC55(2)                                             --------->At4g35610  --------->ARR11(3)                                                        <---------At4g35610  <---------ARR11(3)                                                        <---------ZAT2 --------->HSFB2a(2) --ARR10    <---------ANAC46            ------>ZmHOX2a(1)                --------->LBD16 <---------HSFB2a(2)   acattatcttcactgcgtaattgaagaagttgttctctcttcctcttaatttcgagttgtgttcttaaaaaactccagagctgattcgattctcgagaag  12366600                         <---------HSFB2a(2)                      --------->ARR14(2)                      <---------ARR11(3)                      <---------ARR14(2)                      --------->AGP1                      <---------AGP1                     <---------CCA1(2)                             <---------AHL20(2)              --------->DAG2                                      --------->AHL20(2)             ---------->DOF2    --------->DAG2                <---------AHL20(1)       ----------->RAV1(1)     ---------->DOF2                --------->AHL20(1)       <---------RAP2.6(3)----------->GT1                     <---------AHL20(2)       ------>NtERF2----------->ARR10                         --------->AHL20(2)      --------->DEAR3(1)------>ZmHOX2a(2)                  --------->YAB1      <---------ETT(1)--------->ARR11(3)                  <---------AHL20(2)      --------->RAP2.6(2)--------->HSFB2a(2)             --------->AHL20(2)                    <-----    --------->At4g35610<------ZmHOX2a(2)              <---------YAB1             <---------ZAT6<-----    <---------At4g35610--------->CCA1(2)          <----------DOF2 <---------AHL20(2)  <---------TOE1(3)   aaactaagccgacaataaagttcagatctggaaaaaagcgaggttaccaattctttatttttaataaatttaatctcgtagtagagttagggttctactt  12366700               --------->HSFB2a(2)               <---------HSFB2a(2)        <---------AHL20(2)        --------->AHL20(2)        <---------YAB1       <---------AHL20(2)                              <-----------TGA1            <----------DOF2       --------->AHL20(2)                            <-------TEIL                  <---------DAG2      --------->YAB1 --------->GLK1(2)         ---------->DOF2              <-----------GT1         - -----DOF2   --------->MYB52(1)               --------->AHL20(2)       ---------->DOF2            <-- ----DAG2   <-----------GT1              --------->AHL20(2)         --------->TOE1(3)           <----   ttcgacaattttaattaccagaaattctagggtttatgtgagtttaaattaaagcttcgtcattttcgaagcttaaagttactcactttttatgtctccc  12366800                                                                       <---------At4g35610                                                                  --------->YAB1               <-----                                                                 <---------YAB1      --------->GLK1(2)           <---------AHL20(2)                                  --------->YAB1   --------->HSFB2a(2)  ------>ZmHOX2a(1)       <-----------HVH21                 <----------DOF2     <---------HSFB2a(2)  <-----------RAV1(1)    <---------MYB46(3)                <---------ANAC58     <---------HSFC1(1) ---------->RAV1(2)<<<<<<<<<<<<<<<<<LFY                    <---------ANAC58     --------->HSFC1(1)--- -------ALFIN1  <---------ARR11(3)                    <---------DAG2   --------->At4g35610    <------ -----ALFIN1    --------->ARR11(3)                    <----------DOF2--------->YAB1 <---------GLK1(1)   actcctgttgtattttaaaatctccagtggtcacatagaacaacttcaagattccacttttgcttttataatcagcagtcttctagaaatctgtaatctt  12366900  Previous    Next  AGI:  At4g23740.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G58300.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G58300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69357.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65842.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains In Range:  from: 12366396    to: 12369348    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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