Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------YAB1                                             <--------HAHB4                                             <---------ICU4                                            --------->ICU4                                          <---------ICU4                                          --------->YAB1                                          -------->ATHB1                                  <---------ZAT18                                ----------->HVH21                                         --------->ZAT18                              <---------ANAC55(2)                                         --------->ZAT14                              --------->ANAC55(2) <---------YAB1                          <---------ZAT14                             --------->SPL7 <---------YAB1                  <---------REM1(1)--------                           <---------SPL7 <--------HAHB4           <---------TOE2(3)     ------->GAMYB ------->ZAT18           <---------------AtSPL3--------->ICU4      --------->MYB59     --------->At4g35610 --------ZAT18     --------->HSFB2a(2)   --------->ICU4 --------------->AtSPL8         <---------At4g35610 -HVH21            <---------HSFB2a(2)  --------->GLK1(2)   <-----------------AGL1  <------NtERF2   gtggacaacttatgccatcttgtcgaagcggtacgggacgagaatcattattattagttatgttccatttaggtatagttgtaggcctcaactgcacatc  12213000                                                                 --------->AHL20(2)                                                              --------->HSFB2a(2)                                                         <---------HSFC1(2)                                                         --------->HSFB2a(1)        --------->TOE2(3)                    <-----------GT1                      <---------HSFB2a(1) --------->YAB1      <---------ATHB12                --------->AHL20(2) --------->HSFC1(2) <-------TEIL    --------->WOX13(1)      <----------DOF2            <---------ZAT18     --------->AtLEC2 ->ANAC46   --------->YAB1------>ZmHOX2a(1)  <---------HSFB2a(2) --------->YAB1     --------->TOE1(3)   atatttcaatcaattcataaataaactcctcttttttaaaaaatatactcgaagtagggaacttctataatatagacatgcataaacctgaatagaatgg  12213100                                 <---------YAB1                             <---------ANAC58                                               <--------                             <---------ANAC58                          --------->ZAT14     --------->ANAC58                         <---------ZAT2                                <---------ZAT14     --------->ANAC58          <------ZmHOX2a(1)  <---------ANAC46                          --------->ETT(2)   --------->WOX13(1)        <---------TOE2(3)--------->At4g35610                           <---------ETT(2)--------->ANAC58    --------->At4g35610  --------->ZAT2                   <-----------GT1              --------->ANAC58    --------->ZAT2    <---------ANAC58                <---------AHL20(1)              --------->DAG2    <---------ZAT2    <---------ANAC58                <---------ARR11(3)             ---------->DOF2    <---------At4g35610  <---------At4g35610          --------->AHL20(1)        ----------->GT1    --   tttttgagctgaggatgatcaaatgcgagctgcttgtgaatgtcaatgcaatccaatatatcaccattttcagtctacagaattgaaaaaagcaatcaac  12213200                                                    ------->TEIL                                               --------->MYB52(1)                                              --------->TOE2(2)                                     <                                        --------->TOE2(3)                                        <---                      <---------YAB1    --------->YAB1                                --------->TOE1(3) -ATHB12<---------ANAC55(2)   --------->LBD16 --------->TOE1(2)                       --------->TOE2(3) ------->ATHB12    <---------YAB1       --------->TOE1(3)                          <-----------GT1---   ttgatttgatatgtaaacaatatgattctagccgcatgaaaaccataacttacgaacatgttatccgatttttcaaaagactaatttacctgaaaactct  12213300                                                                        ------>NtERF2                                                                       --------->ANAC46                                                                      <------NtERF2                                                                      --------->LBD16                                                                     --------->ANAC46                                                                    <---------LBD16         --------->ATHB12      ------>MYB46(1)                --------->ARR11(3) ---------WOX13(1)        <-----------GT1              <---------HSFB2a(2) ------YAB1      <---------AHL20(2)                    --------->HSFB2a(2) ------>ATHB12   <---------YAB1------>MYB83  --------->YAB1 ----------->ARR10   tgattggaggtttattgatataattgagtaacctatccaactcgttttcatcatcttctagtaagatttgtccgcgactctctgcaactagaatgagaga  12213400                                                  <------------CBF                                               --------->MYB46(3)                                       <---------ICU4                               ---------->DOF2 ------------>CBF      --------->CCA1(2)                 --------->At4g35610   --------->YAB1     ------->TEIL<-------TEIL      <---------AHL20(2)              --------->At4g35610     --------->ICU4   <---------REM1(1)               --------->AHL20(2)              <---------At4g35610     <---------ATHB12<---------TOE2(3) ---------->DOF2<---------AHL20(2)        --------->DAG2       --------->YAB1   --------->ANAC58  --------->YAB1         --------->YAB1      ---------->DOF2       <---------YAB1    --------->ANAC58  ---------->DOF2  --------->YAB1   taccgctaaaaaggtaagcagaagaagcttatcaaaagaaatcatggcaaccaattgatgtaactataaagattcaaaggcactcttaattatatggttg  12213500                                                                         --------->ATHB12                                                                        <---------YAB1                                                                      --------->YAB1                                                                     <---------YAB1                                                   ------------>CBF <---------AHL20(1)                                                --------->MYB46(3)  <---------AHL20(2)                                           --------->YAB1           --------->AHL20(1)                   --------->TOE2(3)     <---------TOE2(3)          --------->AHL20(2)              <-----------HVH21          <---------YAB1            --------->YAB1             --------->bZIP60(1)       <---------AHL20(2)         <---------YAB1    --------->ZAT18             <---------bZIP60(1)       --------->AHL20(2)    <-----------GT1        <---------ZAT18       <---------ARR14(2)          --------->AHL20(2) --------->GLK1(2) --------->ICU4     <---------   tcaaaagtatatatggtgtcacattaatctaagaccattaattaatattaacaaacaatctatataccattataatgagtggcaagtggccttctttcta  12213600            <---------GLK1(2)               --------->TOE2(3)                                       <         <---------TOE2(3)         <----------DOF2                                          <--------  <-----------------AGL3    --------->YAB1-------->P                                        <--------  ======================================MADS_MADS                                       <-----------GT1  <---------DAG2        --------------->AGL15                                <---------TOE2(3)      < -DOF2<---------YAB1    <---------------AGL15<----------DOF2                ---------->DOF2<---------DAG2   tcccccttattatggattctaaatttctaataagagtctttagcaacctttagtatacataaactttagaacaagaattaaagtattcatttaccttttt  12213700                                                                            ----------->GT1                                                                        ---------->DOF2                                                                 --------->ANAC46                                                                 --------->ANAC58  <-----------HVH21                                  <---------DAG2   --------->ANAC46 ---------TOE1(3)                                    <----------DOF2  --------->ANAC58 --DOF2                                          <-----------GT1 --------->ANAC58 -DAG2     --------->AHL20(2)              <----------DOF2   --------->AtLEC2     <---------AHL20(2) ---------TOE2(3)                    ---------->DOF2<---------DAG2    --------->ANAC58      ---------   ctaaggtcacaaaataaaaacttgacaaatctcaagaattaaagtctttgtttacctttttctatgcaagacacgaaagggtattttttgaagaaaaaga  12213800                                                                                                    <                                                                                                    <                                                                                                   --                 --------->CCA1(2)                                                                 <-                <---------ARR11(3)                                                                 <-                --------->ARR11(3)                                                                 <-         <---------ARR14(2)                               <---------ANAC46                        ---   --------->ANAC58                         --------->ZAT14                                      <---   --------->ANAC58                         <---------ZAT14                                <---------   --------->ANAC46          --------->TOE1(3)            <---------TOE2(3)     <---------At4g35610<- ->DOF2  --------->ARR14(2)  --------->TOE2(3)           <---------LBD16        --------->At4g35610<-   aatataagccaaatccaagatataagtctaaccttgagcatcgcagtgtattgaacatttacggataacaaatcaaatttagagctccatatataacatt  12213900  Previous    Next  AGI:  At4g23370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G23360.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62545.1); contains InterPro domain Src homology-3 (InterPro:IPR001452); contains InterPro domain Protein of unknown function DUF239, plant (InterPro:IPR004314) Range:  from: 12206372    to: 12213445    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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