Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   ------>ZmHOX2a(1)            <---------ARR11(3)                                 ----------->RAV1(2)            --------->GLK1(2)                              <-------TEIL                             <            --------->ARR11(3)                            <---------MYB52(1)        --------->ANAC58-   --------->ANAC46                                     <---------ANAC58            --------->ANAC58-   --------->ANAC58       <-------TEIL                  <---------ANAC58         <---------SPL7     <   --------->ANAC58<-----------GT1   <---------YAB1  <-----------GT1 ------>ZmHOX2a(2)       --------   cgtagacgacacaaaatctttgaaccggttcatttgattttgatcaattgaaatatttccgttcatcctgatccatgctccatcgtatgcaagggtcgag  12159900                --------->ARR14(2)                --------->GLK1(2)                <-----------ARR10             --------->ANAC58        <-----------HVH21                     <---------ANAC55(2)   --------->GLK1(2)                          --------->ANAC55(1)  --------->KAN4(2)                           --------->ANAC55(2)  <---------ARR14(2)                          --------->ANAC58 --------->KAN4(1)                      --------->AHL20(2) --------->HSFB2a(1)                    <---------AHL20(2)                                          - <---------KAN4(1)                   --------->YAB1                                <-------GAMYB   -- <---------HSFB2a(1)                <---------YAB1--------->GLK1(1)               <---------MYB46(3)- ---------KAN4(2)                 --------->YAB1 <---------ARR14(2)               <---------ANAC46 <- --------->TaMYB80               <---------YAB1  <---------GLK1(2)           --------->ALFIN1     --- -------->ARR14(2)             --------->YAB1 --------->ANAC46        --------->ZAT14             <-- ---------ARR14(2)           --------->ANAC46<---------LBD16        --------->ANAC58             <--- ->ETT(2)       <---------ARR14(2)<---------ICU4 --------->ARR14(2) --------->ANAC58             ----   agaatattctggtcagagtatctgagcatacactcatcataataaaacacggattttctctcactcggacactgaacgagtgtgtcgttgatggagaagg  12160000                                    --------->RAP2.6(2)                                    --------->LBD16                                  <---------LBD16                                  --------->At4g35610                                  ------>NtERF2                                  --------->LBD16                                  <---------At4g35610                                 --------->ANAC46                              --------->ARR14(2)                              <---------ARR14(2)        --------->ANAC58   --------->O2        --------->ANAC58   --------->TGA1a        <----------ID1     <---------TGA1a            ----------->HVH21     <---------ARR14(2)    =======================bZIP_DOF     --------->ARR14(2)    =======================bZIP_DOF           <---------ANAC46 -------->ANAC58           <---------O2              <---------MYB52(1)      ------>NtERF2 ------->ATERF1(1)   <-----------HVH21        --------->DAG2   <-----------RAV1(2) -------->ANAC58    --------->LBD16 ------>NtERF2   --------->LBD16  <---------ANAC58 -----NtERF2       <---------DEAR3(1)<------NtERF2  <---------At4g35610     --------->ANAC58 --->NtERF2  --------->MYB52(1) <---------LBD16   <---------LBD16    <---------ANAC58  <----------DOF2 -------ATERF1(1)  <---------ATERF1(2)       ---------->DOF2 <-----------HVH21 ----------->RAV1(2) ------DEAR3(1)    --------->ATERF1(2) ---------->DOF2--------->WRKY38(1)   --------->ANAC58 ------->HVH21   --------->MYB52(1)--------->ANAC46 --------->At4g35610 <-----------HVH21           -   cgacgcagttacgacaaactgccggtgagacgtctccgcggcaaaggaaaagtccggtgactctatcaggggcttgtcccgccctggcgctttggaatcc  12160100                       ---------->DOF2                   <------NtERF2                  ------>NtERF2                 <---------RAP2.3(3)                <---------ANAC58                <---------ANAC58                                      <---------ANAC58              --------->ALFIN1                                        <---------ANAC46             --------->ALFIN1                                         <---------ANAC58           ----           <---------ANAC58                                      <---------MYB46(3)    <---------ARR14(2)           <---------ANAC46                                --------->MYB52(1)          --------->ARR14(2)           --------->ALFIN1                             <---------ANAC55(2)         <---------ANAC58           <---------ANAC58   <----------ID1            --------->ANAC58            <---------ANAC58  <---------ZAT6<---------ANAC46                        --------->ANAC58            <---------ANAC46 -------->ZAT14<---------MYB46(3)  ---------->DOF2      --------->ANAC55(2)        ---------->ID1<---   agtagagtaagaggcgttgggggcagaaagagaagacaaaagggttctgagattagtcaagtaagggctgtttcttgaataagttgtcgtatttgggcaa  12160200                                                                                *TSS   <----------DOF2                                                          <-----------RAV1(2)   ---   <---------------AGL15                                                   <------NtERF2          ===   --------------->AGL15      --------->ZAT2                  --------->At4g35610   <------------CBF  <-----------------AGL3      --------->At4g35610      ---------->DOF2     --------->At4g35610   ---- ----->ARR14(2)              --------->GLK1(2)     >>>>>>>>>TBF1          ----------->RAV1(1)<------- ------ARR14(2)           ------->GAMYB        <------ZmHOX2a(1)  ---------->DOF2 --------->ARR11(3)   atatgctttatatagaaaacattttcaacagaagctgtgaagctagtgaggaagaagaaaaggaagatgaaagaggcaccagaagacattgttcgatttc  12160300                                         --------->AHL20(1)                               --------->YAB1                               -------->HAHB4                               -------->ATHB1                               --------->ATHB51                               <---------ICU4                               <--------HAHB4                               <---------AHL20(2)                              <---------ATHB51                              <---------ATHB12                              <---------WOX13(1)                              --------->ICU4                               <------------CBF                              <---------YAB1                               <---------ARR14(2)                            <---------ICU4                    --------->ANAC55(2)                           ------>ZmHOX2a(1)<-----------GT1   <---------ANAC58               <------ZmHOX2a(2)         <---------AHL20(1)   <---------ANAC58              <---------ARR11(3)         --------->ARR11(3)   <---------ANAC46   <----------DOF2<---------YAB1         <---------ARR11(3)   ----------->GT1                   ----- <---------At4g35610 ------->TEIL      ------->TEIL           <---------ANAC55(1)               <---- --->ZmHOX2a(1)===================HOX2a_HOX2a                 <---------O2<------ZmHOX2a(1)   <------ =====================HOX2a_HOX2a   <---------YAB1         <---------MYB52(1)       --------------->AGL15 ----->TOE2(3)--------->ARR11(3)  --------->YAB1          <-----------HVH21--------->ARR14(2) <------ --GLK1(1)   <---------At4g35610 <---------YAB1 <<<<<<<<<TBF1 <---------ANAC55(2)   <---------------AGL15   ctcagcttttgtttcagatcatgaatctcctaattattatgaatattttcttcttctctctgttacgtgaaacagaggattgactactactataagtcaa  12160400                                                                              --------->ANAC58                                                                            ---------->DOF2        <----------DOF2                                                  <---------YAB1      ---------->ID1                           ---------->DOF2       <---------ANAC46        <------- <----------DOF2                    ----------->GT1                  <---------ANAC58        -------- ---->At4g35610           --------->ANAC58   <---------YAB1          <---------ANAC58       <-------- -----At4g35610           --------->ANAC58 --------->YAB1    <---------ARR11(3)           --------->YAB1 ---WRKY12                --------->ANAC46<---------YAB1     <---------GLK1(2)--------->ANAC58------- ---WRKY38(1)    ----------->GT1<------ZmHOX2a(1)            --------->ARR11(3)  --------->CCA1(2)  -   ctgcttttgtctttttaagtgggaaaacaagacaggaagagtttataatgaaagtgaccattagatttttggcttatgaaaagctatgcatattatcatt  12160500                                                           --------->ANAC58                                                           --------->ANAC58                      --------->ZAT6                 --------->ANAC58 -HAHB4               <---------ALFIN1               --------->ANAC46 ->YAB1           <------ZmHOX2a(2)       <---------YAB1 --------->MYB52(1) -YAB1 --------->TOE2(3)        ------>ZmHOX2a(2)    --------->ANAC58 -->TOE2(3)      --------->ARR11(3)      --------->TOE2(3) --------->ANAC46    <-----------RAV1(2) -------->TOE2(3)<---------ARR11(3) <-------TEIL<----------ID1            --------->ANAC46   aacctctaatctcaacgaagatcaacactcgtgatcgatgcatcatcaatggaacaagcaaacgacatggtagtagacggaccaggctcaagtctctcgg  12160600                        --------->LBD16                  ----------->HVH21                 ------>ZmHOX2a(2)                <---------At4g35610                --------->At4g35610                                                           -------                <------ZmHOX2a(2)                                                ----------->RAV1(2)               --------->ARR14(2)                                                --------->At4g35610               <-----------ARR10      --------->ANAC46                           <---------At4g35610               <---------AGP1        --------->LBD16------->PIF5            <---------ZAT18   <------               <---------ARR14(2)   <-----------RAV1(2)  <------NtERF2 <---------YAB1         <------              <---------CCA1(2)  <---------ARR14(2) <-------PIF5 ---------->DOF2 ====================          <---------ANAC46       --------->ARR14(2)<XXXXXXXXXXXXXXXXXXXXXMIR472 --------->GLK1(2)   <   ctaatgggtttggctcggatctgaccctgaaaacaaatccaggtaattgaggcacgggcagagtaagaaaagtattagtgagcatctgaaacactgtgga  12160700                  <---------GLK1(2)                  <---------ARR14(2)                  --------->ARR14(2)                  <---------ARR11(3)           ------>ZmHOX2a(2)           =============HOX2a_HOX2a         --------->ARR14(2)         --------->ARR11(3)                                   --------->bZIP60(1)               <----         <---------ARR14(2)                                   <---------bZIP60(1)               ----- -->ETT(2)==============HOX2a_HOX2a                      --------->At4g35610   --------->ZAT6 ------- ---ZAT18<---------ARR11(3)   --------->ZAT18         --------->At4g35610 --------->YAB1      <------NtERF2 ---ETT(2)<------ZmHOX2a(2)  --------->ANAC58         <---------At4g35610<---------YAB1     <-------- ===========RAV  <------ZmHOX2a(1)                   ------->TEIL    <----------DOF2   <---------ALFIN1 -----------RAV1(1)          --------->ANAC58      <-------TEIL     <---------ICU4  --------->ANAC46<   cattgttggacgatctgcaggattttcttgaacgcacaataagcttatatggatgcatctgatgacttcatctttatcataactctcccccatggccggg  12160800  Previous    Next  AGI:  At4g23230.1    Description:  protein kinase family protein. Identical to Cysteine-rich receptor-like protein kinase 15 precursor (CRK15) [Arabidopsis Thaliana] (GB:Q8W4G6;GB:O65475); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23160.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23150.1); similar to CRK10 (CYSTEINE-RICH RLK10), kinase [Arabidopsis thaliana] (TAIR:AT4G23180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63725.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contain Range:  from: 12157579    to: 12160280    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g23240.1    Description:  protein kinase family protein. Identical to Putative cysteine-rich receptor-like protein kinase 16 precursor (CRK16) [Arabidopsis Thaliana] (GB:O65476); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23290.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G23290.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO63725.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine p Range:  from: 12160512    to: 12161964    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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