Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <-----------ARR10                                      <---------At4g35610        <---------ANAC55(2)                                      --------->At4g35610        --------->ANAC55(2)    --------->ICU4                   <---------ARR11(3)        <---------AHL20(2)   <---------TOE2(3)                 --------->ARR11(3)        --------->AHL20(2) --------At4g35610                  --------->GLK1(1)      ------>ZmHOX2a(1) ------->At4g35610                  <---------RVE1(1)     --------------->AGL15                <----- -----P                             --------->RVE1(1)     <---------MYB59                 <---------DAG2 -MYB46(1)                          --------->CCA1(1)     <---------------AGL15       <-----------GT1 -MYB83                             <---------GLK1(1)    ----------------->AGL1      <-----------GT1 -->MYB59 <---------YAB1     ----------->GT1      --------->GLK1(2)             <---------RVE1(1) -->MYB111(2)               --------->DAG2        --------->ARR11(3)           --------->ARR14(2) -->MYB111(1)             ---------->DOF2         <---------ARR11(3)           <---------ARR14(2) ---MYB46(3)       ----------->GT1 <---------ARR11(3)    ----------------->AG  <---------GLK1(2)  <-- -->MYB46(2)     ---------->DOF2   --------->ARR11(3)<----------DOF2     --------->ETT(2) <----------DOF2   tagctaatgtttataattctaaagtataaaaaggtaagatatctgactacaaaatcttttcctaattaagtattgtagacggattttttaccctttttta  12110500                   <---------YAB1                 --------->YAB1                 <---------ICU4                              <---------ICU4                 -------->HAHB4                              --------->AHL20(2)                --------->ICU4                               --------->ATHB51              --------->YAB1                                 <--------ATHB1              <---------ICU4                                 <---------AHL20(2)             <---------AHL20(2)                       ----------->GT1             --------->AHL20(2)                  --------->AHL20(1)             <---------ATHB51                    --------->AHL20(2)          --------->AHL20(2)                     <---------AHL20(2)                                --         --------->AHL20(2)                     <---------AHL20(2)                               ---- ------GT1<---------AHL20(2)         --------->WOX13(1)     --------->ICU4   ------->TEIL   --------- --------DOF2--------->ICU4 <---------AHL20(2)  --------->AHL20(2)    --------->ICU4  --------->ZAT6   cttttgacttaataaataattatgaagaattttttttttcaattagataattaaattagttaataatttgtaagaattgaatctttgaactctatcatac  12110600                                -------->ATHB1                                <---------ICU4                                --------->ATHB51                                --------->ATHB12                               --------->AHL20(1)                                                   <                               <---------AHL20(2)                                                 ---                               <---------YAB1                                                     <--                       <-----------GT1                                                          -----                 <---------AHL20(1)                                                           <------                 --------->AHL20(1)                      ----------->GT1                      <------                 --------->AHL20(2)                 --------->AHL20(2)                        -------                 <---------AHL20(2)                 <---------AHL20(2)                      ---------                <---------AHL20(2)          --------->ANAC58              xxxxxxxxxxxxxxxx>smallRNA(i)           <---------AHL20(2)  --------->ICU4  ------>MYB83   --------->AHL20(2)      --------->MYB59 --------->GT1  --------->AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         xxxxxxxxxxxxxxxx ------>DOF2  --------->YAB1   <---------ATHB51------>MYB46(1)--------->ICU4xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) >YAB1    --------->AHL20(2) --------->YAB1 --------->ANAC58  <---------AHL20(2) <---------YAB1------   aaagttaaactattaaaaataaattttacaaaaattattgtatcgcaccaaattttaaatagaaaaaattagtttagagacttctgattcggtccaacaa  12110700  --------->SPL7 ---------SPL7                             <---------ANAC58 ------------>AtSPL3                       <---------ANAC46 -------------AtSPL3                       <---------ANAC58 ---->MYB52(1)                            ---------->ID1                                  ----------- ---MYB52(2)                      <----------DOF2                                        ------>MYB46(1) ---MYB55(2)                   --------->ARR11(3)                                        ------>MYB83 -->MYB46(3)        --------->TOE2(3) <----------DOF2                               <-----------GT1 -->RAV1(1)   <-----------GT1  <---------ARR11(3)             ---------->DOF2 ------------>MYB.PH3(1) xxxxxx>smallRNA(si3)          <---------AHL20(1)       ----------->GT1     ---------->DOF2 ->GAMYB<---------AHL20(2)    <---------CCA1(2)      <------ZmHOX2a(1)     <---------AHL20(2)   acggtacgatttaaaattacaacattaatctaatatctttctttttcgtattttaggagcgaaacaaagacaaaaatttaaagctgttaccatccaattt  12110800                      --------->GLK1(2)                ----------->GT1                                                  <----------DOF2         --------->ANAC58                                              --------->GLK1(2)         --------->ANAC46     --------->ARR11(3)                    *TSS     <---------CCA1(2)         --------->ANAC58  ----------->TBP                          ------------>CBF   ----------->GT1    --------->ARR11(3)    ---------->DOF2        --------->ANAC58 <-------GAMYB----------->GT1<---------CCA1(2)       --------->YAB1--------->ANAC58 ->CBF ---------->DOF2<---------ARR11(3) ------>ZmHOX2a(1)         --------->ANAC46   gagggttgtaaaagcaaggagaaaaatctatatatctagagtcctccaaagacacttataagttctcacacacaatcttttatctttcattgtttctctc  12110900                                                              --------->GLK1(2)                                                              <---------ARR11(3)                                                              --------->ARR11(3)                                                              <-----------ARR10                                                             --------->RVE1(1)                                                       ----------->GT1                                                       <----------ID1                                                      ----------->GT1                                                <---------------AGL15                                                --------------->AGL15                                               ----------------->AG                          --------                                               <-----------------AGL1                       ------->TEIL                                  <---------TOE2(3)   <---------------------WRI1  --------->YAB1                              <----------DOF2  ----------------->AGL2            <---------YAB1  ----                             ------>ZmHOX2a(2) <-----------------AGL2          --------->YAB1--------                           --------->ARR11(3)  ----------------->AGL3         <---------AHL20(2) ----                           <---------ARR11(3)  <-----------------AG--------->ANAC46    <---------At4g35610                       <----------DOF2         ----------------->AGL1   <---------MYB52(1)<-------TEIL                  <----------DOF2 <---------TOE1(3)  ----------->GT1  ----------->GT1  --------->At4g35610   actctctcttgttgtgaattctttcctttgatctttcaggtttgcaagttccaaatggggaaaaaatctaagccgtttatattatcatcagatgcaccta  12111000                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                 ---------->DOF2               --------->MYB46(3)               -----                              <---------YAB1        ----------->GT1                 --------->ANAC58 ->ANAC58               --------->ARR11(3)        ---------->DOF2        --------->ANAC58      ------ ----->ANAC58           <---------ARR11(3)     <---------At4g35610       --------->ANAC58  ---------- ->ANAC58           ---------->DOF2   --------->ZAT18        ----------->RAV1(1)    --------->ANAC58 ----->ANAC58<------NtERF2  <---------At4g35610--------->At4g35610    <---------REM1(1)   <---------ATHB12   agccccctcataggcagccttacaaagctcttctgataagcgctcagtcatctaaagtgaattcaacagatggtgaagcaactggttcgcaaatgaagcc  12111100     ---------->DOF2 <---------ARR14(2) ------->LBD16 ----NtERF2 ----->LBD16                                                         <---------ARR11(3) ----->At4g35610                                                     --------->ARR11(3) ------LBD16--------->ANAC58                                     ---------->DOF2                 <--- -->NtERF2  --------->ANAC58    <---------YAB1=========================HOX2a_HOX2a   <---------DAG2 ---->DEAR3(1)            <---------ARR11(3)  <------ZmHOX2a(2) <------ZmHOX2a(1)    <----------DOF2 --->ATERF1(1)        ---------->DOF2---------->DOF2 <------ZmHOX2a(1)         ----------->GT1------- >DOF2    ---------->DOF2 --------->ARR11(3)  ==============HOX2a_HOX2a  <---------LBD16   ------>ZmHOX2a(1)   gcggaaacaaagaaaagccccttacaaagctcttctcattagagctcgatcaccaggactaagtgaggaaagctcttcggagagtgacttttcctatgaa  12111200                           <---------At4g35610                           <---------LBD16--------->ANAC58                           --------->HSFB2a(2)                           --------->At4g35610                                       <---------HSFB2a(2)                        --------->At4g35610--------->MYB46(3)                        <-----------RAV1(2) --------->ARR14(2)   <---------ICU4      -------->P                      --------->HSFB2a(2) <---------ARR14(2)   --------->YAB1      --------->ANAC58                <---------HSFB2a(2) ------At4g35610   --------->YAB1     --------->ANAC58                --------->TOE1(2)            <- --->DOF2         <-------TEIL        --------->ANAC58  --------->At4g35610   ---------->DOF2      --   gcggattgtgaagcatccgattcatcatcagcggagagtgaagcaaccaatatgaagccgatgaagaacaaaactgcgagaaaagctccagaagcgaggc  12111300                               ============================HOX2a_HOX2a                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                              =============================HOX2a_HOX2a                              --------->GLK1(1)                              <---------GLK1(1)                             <---------ARR14(2)                             --------->ARR14(2)                             --------->ARR11(3)                             <---------AGP1                                     ----------->GT1                             <---------ARR11(3)                     ------>ZmHOX2a(1)                            <------ZmHOX2a(1)                       --------->LBD16                           <---------HSFC1(2)                       <---------HSFB2a(2)                           --------->HSFC1(2)  --------->YAB1       --------->HSFB2a(2)     ---------->DOF2  ===============HOX2a_HOX2a                   <---------LBD16 --------At4g35610    <------ZmHOX2a(1)     --------->YAB1      <-----------HVH21    ---------->DOF2 ------->At4g35610    ================HOX2a_HOX2a   ------>ZmHOX2a(1)          ----------->GT1   ----   tagcagacaaagagcaaaacaagaggagaaggatctcagagaagaacaataatcctgaagaaaccatgtcctgggaaccagaagttaaaaagactctttg  12111400  Previous    Next  AGI:  At4g23110.1    Description:  insulin-like growth factor binding. contains InterPro domain Insulin-like growth factor binding protein; (InterPro:IPR009168) Range:  from: 12110868    to: 12111581    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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