Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->MYB52(1)                                             <------MYB83         <---------TGA1a                                             <------MYB46(1)      --------->O2                                            --------->MYB59       <---------O2 --------->TOE2(3)                           <---------YAB1   <---------AtMYB61     --------->TGA1a --------->WOX13(1) ---------YAB1    ----------->HVH21 ---------->DOF2  --------->ANAC46  <---------ANAC46 ----->GT1    --------->ATHB12      ========================================bZIP_DOF       --------->GLK1(2)   ttatatttgttttcaacgatttgacaaatattcttgaataaagagtttggtcttgacacaacgtagcctcgtggcataaaacatcaatcgaagaatcgaa  11907200                --------->TOE2(2)                --------->TOE1(2)                                                          <---------HSFB2a(2)               --------->YAB1                                                              --------->HSFB2a(2)              <---------YAB1                                                        --------->AHL20(1)         <---------ANAC55(2)                                                        <---------AHL20(2)         --------->ANAC55(2)                         ----------->GT1                <---------AHL20(1)     <---------ARR11(3)                             --------->DAG2               --------->AHL20(1)     --------->ARR11(3)                           ---------->DOF2                <---------AHL20(2)    --------->CCA1(1)                         <---------------AGL15              <---------AHL20(1)    --------->RVE1(1)    ----------->GT1<----------DOF2  ---------->DOF2         --------->AHL20(2)   acacaaatatctcgtgatcatacgaagaagtaaaaacgttttctttttttttaaaaggtaaaagcctaatgctggataatcaataaaatatttctaaaaa  11907300                                                                                                   --                                          <---------YAB1<-----------------------TaNAC69(2)         --                                         --------->AHL20(1)                               <-------MYC4                                         --------->ARR11(3)                               ------->MYC3                                         <---------AHL20(1)                               <-------MYC3                                         <---------ARR11(3)                               <-------MYC2                                       --------->AHL20(1)           XXXXXXXXXXXXXXXXXXXX>MIR861-5P --                                       <---------AHL20(1)      <---------AHL20(2)         ------->MYC2               ---------->DOF2         --------->ARR11(3)  ----------->GT1              ------->TEIL           ---------->DOF2    <----------ID1          ----------->HVH21              --------->AtLEC2      ------->TEIL     ----------->GT1 <---------ARR11(3)<---------bZIP60(2)    --------->ANAC46<----   cgaaaatgaacttaaaagaaagagagagtaaaaaaacaaaaaatatttttgtattagtgacatgttaaatttggagaactatacatcatgcacatgtata  11907400                               <-----------RAV1(2)    --------------------->WRI1                            ==========================bZIP_DOF                            ===============================MYC_MYB           <---------ALFIN1 --------->ANAC46          <----------DOF2                           <<<<<   --------->ANAC58         --------->TGA1a          <---------ANAC58                   --------->ZAT14   --------->ANAC58       <---------ALFIN1           <---------ANAC58               <---------ICU4 ------->ANAC46       <-----------HVH21    ---------->DOF2                          --------------->AtSPL3 ------->ANAC58      ------->GAMYB       --------->YAB1                             --------------->AtSPL8 ------->ANAC58      =================MYC_MYB     <--------P         --------->At4g35610<---------ZAT14 -----REM1(2)     --------->MYB52(1)    ----------->TBP   ---------->ID1           <---------ATHB12   cacgcacgaacacacacattcaacggtcacacctcagaggctataaaaagaggttgctttgttctattctcagcatcaaattcaaatcagtactcttctt  11907500                                                  --------->ANAC55(1)                    ----------->GT1                                                  <---------ANAC55(2)                 ---------->DOF2                                                  --------->ANAC55(2)             --------------->AGL15                                                  --------->ANAC58                <---------------AGL15                 --------->ANAC46                 --------->ANAC58          <---------ICU4               --------->ZAT6                     ----------->GT1           --------->ATHB51  <------ <<<<TBF1 ----------->GT1                         --------->ANAC46       --------->YAB1 --------->DAG2   cttcatcttgaactgtaacacaaaacacagagagagagacatatttttgaaaacgtaatttcagacaaacccgtttcataatttctccaaaaggtttcat  11907600                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                                                ------>ZmHOX2a(2)  --------->ARR14(3)                                                               <------ZmHOX2a(2)   <---------ARR14(3)                                                              <---------ARR14(2)   <---------ARR14(2)                                                    <---------TOE2(2)              --------->AGP1                            --------->TOE1(3)       <---------TOE1(2)      <-------TEIL                    <---------ANAC58               --------->LBD16       <---------GLK1(2)                    <---------ANAC58              <---------TOE1(1)      --------->ARR14(2)          <---------GLK1(1) --------->TOE2(3)    <------NtERF2--------->ARR14(2) ----------->ARR10---     <---------LBD16<---------ANAC46           <---------ARR14(2)        <---------ARR14(2)  -------- ------------------ANAC81   <---------MYB59    --------->ARR14(2)----------->HVH21 --------->ARR14(2)   tttgttttctgggtctctgttttcttggaacctaaacaactatgaagaggctccgaggttttaagatcggacacagattcgtcaagatcttcaaatggat  11907700                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                                                     <---                         --------->ARR14(2)                                             --------->ALFIN1                         <---------ARR14(2)                                            --------->ATERF1(1)                      --------->LBD16                                             <---------DEAR3(1)                     <---------LBD16          <---------GLK1(1)                   --------->ANAC58                    <---------LBD16           --------->GLK1(1)    --------->GLK1(2)   <------NtERF2                  ------>MYB46(1)          --------->LBD16         --------->ARR11(3) <---------DEAR3(2)                  ------>MYB83           <---------LBD16 ----------->GT1          --------->ANAC58                <---------MYB59        <---------WRKY18(1)         <---------ARR11(3)<---------DEAR3(1)  --------->LBD16 --------->MYB52(1)<---------ANAC58     --------->LBD16          --------->ANAC46 -- ------>GLK1(2) --------->AtMYB61   <---------ANAC58 -------->P    <-----------ARR10<---------ABI4(1) --->GT1       ----------------->AGL1 ----------->HVH21<---------LBD16     <----------DOF2     <-----   aatccgaagtagaagaaaccaaaccgggaaacgccaatgcctgaccggaattctcaacccggttacaaaaatctactctttagcacggcggtgtctccgt  11907800                                                                    ----------->RAV1(1)                                                                    ------>NtERF2                                                                   --------->At1g77200                                                                   ----------->HVH21                                                                   --------->DEAR3(1)                                                <------MYB46(1)    --------->RAP2.3(3)                                            --------->ZAT2         --------->DREB2C(2)                                            <---------ZAT2         <---------ETT(1)                                           --------->LBD16        <------NtERF2                                         <---------LBD16------->TEIL------------>AtMYB77                                        <-----------------AGL1    --------->ORA47(2)                              <---------LBD16<---------ANAC46     --------->RAP2.3(1)                       <XXXXXXXXXXXXXXXXXXXXMIR166A-G--------->MYB46(3)                  --------->LBD16      <---------ARR14(2)        <---------ATERF1(1)                <---------ZAT14      ----------->HVH21 --------->MYB52(1)                          <-   <---------At4g35610<------ZmHOX2a(1)--------->ARR14(2)--------->DEAR3(2)                       <-- ------ANAC46   --------->ZAT14      ----------->ARR10------->GAMYB--------->DEAR4(1)          <----- ------->ALFIN1 <---------LBD16   <-----------HVH21  <---------MYB52(2)                     <-------- ------HVH21   --------->ALFIN1 --------->LBD16 <------MYB83     ------>NtERF2       <----------DOF2-   cgtggagctaatagactgtgcggaggaatgaaaccgggtcagacccggcttggtaacgaaccgaagacgccgacagttccaagagggcatttagtggttc  11907900                                   <---------SPL7                                   <---------TCP16(2)                                 <---------AtMYB61                               <---------ANAC46                            --------->ALFIN1                          <---------ANAC58                          --------->O2                          <---------ANAC46                          --------->TGA1a                       --------->ANAC46                     --------->ANAC58                     --------->ANAC58                  --------->ARR14(2)                  <---------ARR14(2)--------->PCF5             --------->ALFIN1 --------->ALFIN1            <---------MYB52(1)<---------AtMYB61         <---------LBD16  <---------O2       --------->GLK1(2)  <---------TGA1a       <---------ARR14(2) <---------ANAC58     <---------AHL20(2)   --------->At5g28300 ----------->HVH21      --------->AHL20(2)  <---------DEAR3(2) <---------ANAC55(2) <---------MYB52(1) <---------DEAR3(1)--------->ARR14(1)  --------->LBD16       ------>ZmHOX2a(1) <---------DREB2C(2) --------->ANAC46 <---------LBD16     ------>MYB83 <---------At1g77200 --------->ANAC55(2)--------->LBD16   ------>MYB46(1) <---------DEAR4(1)--------->CCA1(2)--------->TCP16(1)  ------->GAMYB ----------HVH21  --------->ARR11(1)<---------PCF2     --------->MYB46(3)                           < ---------RAV1(1)<------ZmHOX2a(1)<---------MYB46(3) <-----------GT1                                - --TEIL--------->ARR14(2) <---------bZIP60(2) <---------AHL20(2)                                   <- -MYB46(3) --------->LBD16======================================MYC_MYB                  <------NtERF2 -------->DDF1  ----------->ARR10--------->ALFIN1  <---------AHL20(2)      <---------MYB46(3)   <----   atgtcggtgaatccggtgaggatacgcgacgtgtggtggtcccggtgatttattttaaccatcctctgttcggagagttgttggaacaggcagagcgggt  11908000                                                                                     <---------ALFIN1                                                                                     --------->AtMYB61                                                                         --------->At4g35610  -------                                                               <---------At4g35610  --------->MYB46(3)                                               <---------ARR14(2)     <---------ARR14(2)      -------               --------->LBD16                 <---------GLK1(2)      --------->ARR14(2)    ------>NtERF2             <---------LBD16         --------->ETT(1)          --------->At4g35610 --------->TCP16(2)            --------->MYB52(1)  <---------ANAC58             <-----------RAV1(2)  <---------PCF2  ---          --------->MYB46(3)    <---------ANAC58         --------->HSFC1(2)       <---------TCP16(1) ---------ANAC46 <-----------HVH21   <---------ANAC46    <---------HSFC1(2)       <---------PCF5----- -------->ANAC55(2)--------->ETT(1)<-----------HVH21     <---------HSFB2a(1) <---------AtLEC2<------NtERF2 --------LBD16------->GAMYB--------->YAB1      --------->ARR14(2)    <------ZmHOX2a(1)     --------->DEAR3(1) ------DOF2 -------->P    <---------YAB1    <---------ANAC46<-------TEIL------>ZmHOX2a(2) --------->DEAR3(2)   ttacgggtttgaacaaccgggtcggattatgataccttgtcgggtttcggattttgagaaggttcagatgaggatcgctgcatgggaccactgccgacga  11908100  Previous    Next  AGI:  At4g22620.1    Description:  auxin-responsive family protein. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G12410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70321.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 11907642    to: 11908124    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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