Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              <------                                                             <-----------HVH21                -------                  --------->ZAT14                      >>>>>>>>>>>>>>>>>LFY                   <------              --------->ANAC46                        --------->ANAC58         ----------->GT1<------     <---------ARR11(3)                               --------->ANAC58     --------->YAB1     -------     --------->ARR11(3)                               --------->ANAC46    --------->ICU4    --------- ------->DOF2 <---------ALFIN1                      ---------->DOF2  <---------ANAC55(2)  ---------->DOF2   caaagaagataatcacacactgcaaacaaaacaaaacaaaacaaaacaaaacaaaaaagccactgtgagataagtaaacatgagtaaaactgaaaagata  11777700                                          --------->GLK1(1)                <---------------AGL15                                     ----------->RAV1(2)            --------->ZAT18                                     --------->At4g35610            <-------TEIL                   --                                     <---------At4g35610            <---------ZAT14              ----                                     <---------ZAT2                 --------->ZAT14           <------ZmHOX2a(2)    --------->YAB1                   --------->ZAT2                 <---------ZAT18          ------->TEIL -->ARR11(1)                       ------->GAMYB                --------->DAG2               -------- ---GLK1(2)                       --------->MYB46(3)            --------------->AtSPL8  ============= -->ARR14(2)                     ------>MYB46(1)           <---------TOE2(3)        ---------->DOF2<- ---ARR11(3)                     ------>MYB83         --------->GLK1(2)    <----------DOF2   <------- ---ARR14(2)                     -------->P <---------ATHB12   ---------->DOF2  ---------->DOF2------ -->ARR11(3)      ------->TEIL --------->AtMYB61     <---------GLK1(2) --------->ANAC46 <------ZmHOX2a(1) -->ARR10---------->DOF2      --------->MYB46(3)--------->AtLEC2<---------------AtSPL8  =============HOX2a_HOX2a   ctgccatcagaaaaagaatgaaacttggacaaaccaaccagctgaaatcaatgcagaatctaagataaagtacactcctttacaaagaaaggatggatcc  11777800          <---------YAB1          --------->ICU4        --------->TOE2(3)        --------->YAB1 ------->ZAT2                                                                                       - -->ZmHOX2a(1)                                                           --------->TOE2(3)    ------- ->ARR14(2)                                                         <---------MYB52(2)       <------- =HOX2a_HOX2a                --------->At5g28300  >>>>>>>>>SARD1   <---------At4g35610   <-------TEIL --------ZAT2         <---------ICU4              >>>>>>>>>CBP60g  --------->At4g35610--------->At4g35610 --ARR14(2)<---------ICU4   ----------->GT1----------->GT1         --------->ZAT2     <---------At4g35610 >ZmHOX2a(2)         --------->AHL20(2)---------->DOF2        --------->ANAC46     <---------At4g35610   tagctcagaaccataattctcaattcattacagtaaaaaaaaaaagagtgaaatttggacaaacacatcagctaacatcaatggaagcagatgcagaatc  11777900                                                          <---------YAB1                                                        --------->YAB1                                                      <---------WOX13(1)                                                    --------->ATHB12                                                    <---------ICU4                                                    --------->ATHB51       --------->ALFIN1                            <---------ATHB12 -------->YAB1                                     <---------YAB1 -->GLK1(2)                  ---------->DOF2       <---------ATHB51 --GLK1(2)     <----------DOF2    <---------GLK1(1)--------->ICU4            --------->YAB1     -----   taaaataatgtgttgagctttactaaaaaaccaaagaattctctcccaaacccataattgataattcaattcactactatcaaaacatgtgagcctataa  11778000                                                   <-----------HVH21                                            --------->YAB1                                           <---------ATHB12                                          -------->P --------->YAB1                                          ------>MYB46(1)                                          ------>MYB83  --------->SPL7                                         --------->MYB55(1)                  <---------ANAC55(2)   <---------MYB111(2)                  --------->ANAC55(2)   --------->MYB46(3)             --------->AtMYB61          <---------MYB55(2)            --------->MYB46(3)          <---------MYB111(1)           -------->P  <---------YAB1   --------->DEAR3(1)        <------ZmHOX2a(2)               --------->AtMYB61       --------->ARR11(3)               <---------MYB46(2)       <---------ARR11(3)           --------->MYB46(3)<---------SPL7                              --- ---->DAG2--------->WOX13(1)   --------->AtLEC2   --------->WOX13(1)              ----------->HVH21<-   gggggatgagatcaaccaatacttgataattcaatgcaaacaccaaccatatcagtcatacggtgagcataaaactgaccagaggggacgagactcgaga  11778100                              <---------ANAC46                         ------>NtERF2                        --------->ANAC46                        ------->GAMYB                       --------->MYB46(3)                               <---------AHL20(2)                     <---------ARR14(2)                                --------->AHL20(2)                     --------->ARR14(2)                           <-----------GT1                <---------ANAC58                              <---------DAG2 <---------ANAC46  <-------TEIL                               <----------DOF2                    <--- ------>ALFIN1  <---------ANAC46                           <-----------GT1     <--------P      <----- --------ZAT14  <---------ANAC58   *TSS            <---------ANAC46  --------->TOE2(3)   <---------At4g35610   gtggagggagacagagaagcgtgcatccgccttcgtagagagagtttggggttttgtgttttcacttttcacattaaatgggtaagttttgggctgtctt  11778200                      <---------ARR11(3)        <---------DAG2--------->ARR11(3)          ---------->DOF2        <----------DOF2--------->CCA1(2)         --------->YAB1     --------------->AGL15                      <---------ATHB12    <-----------------AGL1       --------->ZAT6------>MYB83                                      ====    <-----------------AGL2      ----------------->AGL1                                           <---  <-----------GT1   <---------TOE2(3)          ------>MYB46(1)          ---------->ID1        ------- ------AHL20(2)     <---------TOE1(3)         --------->WOX13(1)    <----------DOF2         <-------- -----DOF2      <----------DOF2<-----------------AGL1       <---------REM1(2)         ----------->RAV1(1)   ttattttccacttttgggctttaagatttaagtttccactatggaaaccaatcaaaggcttctacatgggctttgttgtttactagcacaacattgcacc  11778300                                               --------->TOE1(3)                                             <---------TOE2(3)                                             <---------TOE1(3)            --------->ANAC46                               <---------RVE1(1)             <---------ANAC58                               <---------CCA1(1) --------->WRKY12 --------->GLK1(1)                              --------->ARR11(3) --------->WRKY38(1) <---------ANAC58 =================================bZIP_DOF  <---------DOF5.7(2)   <---------GLK1(1) -------DOF2            <---------TGA1a   --------->DOF5.7(2)<---------ANAC58 >TEIL          --------->AtLEC2          <---------MYB52(1) <---------ANAC46                  ------ -ZAT18      <---------YAB1   <---------ARR11(3)--------->DOF5.7(2)  <---------ANAC58       ---------   tttaacttcagacttatcatgcactgatgtgagatatttaagccgttaacgttgacaatagttgctggatttcttcccacaatacatgtctcatcagtca  11778400                                           --------->YAB1     <----------DOF2                <-----------GT1              ------->GAMYB     ------>ZmHOX2a(1)            --------->YAB1           --------->TOE2(3)                    <---- --->YAB1                        <---------ATHB12         --------->REM1(1)             --------->ZAT14 >WOX13(1)                 --------->GLK1(2)        --------->ANAC46     <---------ICU4 <---------ZAT14   tcacatccttttccattactgtggaagaaaatccaatgataccagtcaaaataaacgcctacatcaacagtctaatacttcccattctactgaagtactc  11778500                                                                           -------->HAHB4                                                                          --------->ICU4                                                                          <---------YAB1                                                                        --------->YAB1                                                         <---------------AGL15   <---------TOE2(2)                                                        <---------MYB59 <---------ICU4                                                        <-----------------AGL2   <---------TOE1(2)                                                 <---------ARR11(3)    --------->ICU4         <---------WOX13(1)                   <---------TOE2(3)      --------->YAB1       --------->ATHB12                      ---------->DOF2    ----------->GT1  <---------TOE2(3) -----LBD16     <---------ANAC46           <---------YAB1--------------->AGL15------>ZmHOX2a(2)   agggtttaaagattgatagtgtatacataaaccagtctatatactattaaagatagtatctaatttgggtaaaataatgatccaaggtttggatagtgac  11778600  Previous    Next  AGI:  At4g22280.1    Description:  F-box family protein. Identical to F-box protein At4g22280 [Arabidopsis Thaliana] (GB:Q3E7K7;GB:O49633); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G58920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63569.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 11775981    to: 11778135    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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