Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------AHL20(2)                                                                            <---------AHL20(2)                                  --------->ANAC46                          --------->AHL20(2)                                  <---------ALFIN1                         <---------AHL20(2)                                  ----------->RAV1(1)                     --------->YAB1                                 <------NtERF2                        <---------AHL20(2)        <---------YAB1          ------>NtERF2                        --------->AHL20(2)            <-   <---------ZAT6              --------->PCF2                      --------->ARR11(3)  <---------TOE1(3) --------MYB52(1)       <---------YAB1    ----------->GT1          <---------ARR11(3)  <---------TOE2(3)   tgttagtcttatgatggaaacacaatgttattgcccccacaattttgttatataaaacagactctagtagattttatattaattttgttaaggtttatat  11672000                                                                          --------->MYB46(3)                        <---------YAB1           --------->ANAC46         --------->REM1(1)    <-----                      ----------->GT1            --------->ANAC58       ----------->RAV1(1) <--------                    >>>>>>>>>ARR2                --------->ANAC58     <------NtERF2      --------->AHL20(2)                  <---------YAB1               ---------->DOF2       --------->ANAC58    --------->ATHB51          <---------ETT(2)                 --------->YAB1            --------->ANAC58 --------->TOE2(3)        <---------At4g35610                --------->TOE2(3)       <------ZmHOX2a(1)  --------->YAB1 ------TEIL       <---------AHL20(2)      ----------->GT1        <---------TOE2(3)--------->ZAT18 <--   atacatattcagtagacaatttgattgtgaatacaaactattcaatgttaaaagcaagactcgttctaaggaggcaacaacaagtgaaccataatttata  11672100                                    <---------WRKY18(1)                                   --------->WRKY38(1)                                   --------->WRKY45                                   --------->WRKY12                                  <---------WOX13(1)           --------->MYB46(3)      --------->ARR14(2)      <---------WOX13(1)         <---------ARR14(2)      <---------ARR14(2)     <------------CBF            --------->ARR14(2)     <------ZmHOX2a(1)     <---------YAB1       <---------ALFIN1                         <---------GLK1(2)   <---------TOE2(3)   <---------GLK1(2)        ----------->RAV1(1)                 --------->WRKY18(1) ------GT1        <-----------GT1<---------ANAC58        --------->GLK1(2)     <------------CBF -AHL20(2)    <---------ARR11(3) <---------ANAC58    <------ZmHOX2a(1)        --------->ATHB12      < --------DOF2 --------->ARR11(3)<---------MYB46(3)<-----------RAV1(2)       <-----------HVH21      --   cttttgaggatttagagattttactgattctaattggttgaccaaaatcgccacaggagaatccaacaactacgaactggtcattggtcaagagtctctt  11672200                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                                                  --------->ARR14(2)                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                                  <---------ARR14(2)                                                                  <---------AGP1         ------->GAMYB                                                                  --------->AGP1        --------->MYB46(3)                                       <-------TEIL              <---------CCA1(2)      <---------MYB52(2)                                     <---------MYB52(1)         ----------->ARR10   <-------TEIL     --------->WRKY18(1)          <---------LBD16     ----------->TBP        <----------DOF2       -- ------------CBF          <------------CBF<---------At4g35610--------->TOE2(3)  <---------TOE2(3)  -- ---->ZmHOX2a(1)       ------>ZmHOX2a(1)--------->REM1(1)  <-------TEIL  <---------At4g35610       --   cctattggtcaaacattttctattcctctattgttcaccggtacatctcacaaactatatatacattagatcttctgctctttaggttcaacaaacaaaa  11672300                          <---------ICU4                         <---------YAB1                       --------->YAB1                       <---------ICU4                      <<<<<<<<<ARR1                      <---------ATHB12     ----------->RAV1(1) --------->ICU4                 --------->ANAC58 ------->ANAC58       <<<<<<<<<ARR2                     --------->ANAC46        --------->ALFIN1 ------->ANAC46   ------------>CBF                      --------->ANAC58  <-----------GT1     ------- ------->ANAC58  --------->ANAC46                <---------GLK1(2)      <---------AHL20(2)------>ZmHOX2a(1)   caaggaacaccagaaataaacacaatcataatcaacaaaaccagaaaacaaaattctccagcaactagatcgatttaaaccggtgttgtctcctctatat  11672400                                                                              --------->YAB1                                                                              --------->TOE2(3)                                                                         --------->LBD16                                                                        --------->ANAC55(2)                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                        --------->ANAC58                                                                       ------>ZmHOX2a(2)                                                                      --------->ARR14(1)                                                                      --------->CCA1(2)                                                                      <------ZmHOX2a(2)          <------NtERF2                                              --------->AGP1        --------->bZIP60(1)                                          --------->ARR14(2)        <---------TGA2(1)                                            <---------ARR14(2)        <---------ANAC58                                             <---------ARR11(3)        <---------ANAC58                                             --------->ARR11(3)        <---------ANAC46                                             --------->ARR11(1)        --------->TGA2(1)                                            --------->ARR14(3)        <---------bZIP60(1)                 XXXXXXXXXXXXXXXXXXXX>MIR838<---------LBD16   <---------At4g35610          <---------YAB1                       <---------ARR14(3)   --------->At4g35610     --------->ARR11(3)                        <---------GLK1(2)         <----- ---->TBP<-----------TGA1  <---------ARR11(3)                      ----------->ARR10   ---------->DOF2   atatcagatggcgtcattacaggcttcaagatttatgcttactacttcttgttcttcttgcacaagaacaagatccgcaatctcaatcccaaagttacca  11672500                                                                                                 <---                                                                                                -----                                                                                              -------                                                                                              <------                                                                       <------MYB46(1)    ------>ZmHOX2a(2)                                        --------->GLK1(1)              <---------MYB46(3)<------ZmHOX2a(2)                            <------ZmHOX2a(2)                          <------MYB83     <---------ARR11(3)                 --------->LBD16     --------->LBD16                 <--------P         --------->ARR14(2)                <---------ANAC55(2)<---------LBD16                   <---------MYB52(1) <---------ARR14(2)               <---------LBD16    --------->MYB52(1)                <-------GAMYB       --------->ARR11(3)             <---------ARR14(2)  --------->ARR14(2)                <---------MYB46(3)   <---------AGP1  <---------AHL20(2)        <---------ATHB12                       <---------DEAR3(2)   <---------ARR14(3) --------->AHL20(1)    --------->MYB52(1)              --------->ARR14(2)               --------->ARR14(3) <---------AHL20(2)  <---------ARR14(2)--------->ARR14(2)    --------->ARR14(2)       ----------->ARR10 --------->AHL20(2)  --------->ARR14(2)<---------GLK1(2)    <---------GLK1(2)    <---------At4g35610 ----MYB59   --------->ARR14(2)  <---------ARR14(2)    <---------ARR14(2)        --------->At4g35610   aaatttaatgtctcgattccgcaaataccgatcaagaaccggaatttcagagtcgaagaaccgattcttcggttggatgggtttgctgaagatcttgatc  11672600                                                                         <---------MYB46(3)                                                                         <---------DEAR3(2)                                                                        <---------DEAR3(1)                                                                        <---------ANAC46                                                                        <---------RAP2.6(2)                                                                        <---------DREB2C(2)                                                                <---------At4g35610                                                                <------NtERF2                                                              <------NtERF2--------->ARR14(2)           <----------ID1                                     <---------RAP2.6(2)    <-----------HVH21                                         <---------DEAR3(1) <-------GAMYB                                               <------NtERF2<-------GAMYB -------DOF2                                    --------->ARR14(2)      <---------ANAC58 ->ZmHOX2a(2)                            --------->YAB1      <---------LBD16  <---------HSFB2a(2) -->ARR11(3)          ---------->DOF2   --------->ICU4    <-----------HVH21<---------ARR14(2)      -- ---ARR11(3)   ---------->DOF2      --------->ZAT18   ---------->DOF2   <---------ANAC58         <---   tttcgttgtcagagagacaaaggcaaaagaagagagggtgcgatgatcaggttttgcaaaggtcgcggctcatggcggttcttgaagaagttatagatag  11672700                                                                                                 <---                                         <---------GLK1(1)                                       ----                                 --------->ICU4                      --------->YAB1             -----      <-------TEIL           ------->GAMYB                          <---------YAB1             <-----   --------->At4g35610      --------->ANAC58                     --------->ICU4                <-----   <---------At4g35610      --------->ANAC46                 --------->LBD16           <----------DOF2 ------->ALFIN1             --------->ANAC58                <---------ANAC46         <---------RAP2.6(3) ------ANAC46   --------->TOE1(2)<---------ATHB12           <---------ANAC55(2)      ------>NtERF2<--   agtggagatgcacaagaacattggagagcaacgcaataactggaactctctcttgctcaattccgtcaatatgatcactctcactgccgctttgatggcc  11672800                                                                           --------->At4g35610                                          --------->At5g28300              <---------At4g35610                                        <---------DEAR3(1)            <---------ANAC58                                       --------->LBD16                <---------ANAC58                                       <---------LBD16              ------>NtERF2                                     <---------LBD16              <---------ANAC46          <--------                                   <---------ARR14(2)             <---------ANAC58        ------>NtERF2 ---NtERF2                         --------->ARR14(2)             <---------ANAC58     --------->At4g35610 ----->LBD16  --------->ANAC58    <---------MYB52(1)             <---------At4g35610   <---------At4g35610 ---->RAP2.6(2)              --------->GLK1(2)               ==============================RAV ----LBD16    --------->ANAC46  <---------ANAC58             --------->ALFIN1  <-----------RAV1(2) ----ANAC46   --------->ANAC58  <---------ANAC58             <-----------RAV1(1)   --------->ALFIN1 ----NtERF2  ------->TEIL   <---------GLK1(2)            <---------LBD16<---------At4g35610 <--------   ggaatagcctctatgaacgccagtggaatagattccgtttccgcggtgagtatagcttctacggtgttgctggcttctgctacaggtttggctgccttga  11672900  Previous    Next  AGI:  At4g22030.1    Description:  F-box family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43351.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 11672408    to: 11675587    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version