Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->AHL20(2)                   <---------AHL20(2)                 --------->AHL20(2)                 <---------AHL20(2)                                  --------->ANAC55(2)               <---------AHL20(2)                                    --------->YAB1               --------->AHL20(2)                                    ----------->GT1             --------->AHL20(2)                                   --------->ARR14(2)             <---------AHL20(2)                                   --------->ARR11(1)           --------->AHL20(2)                                     <---------ARR14(2)           <---------AHL20(2)   <<<<<<<<<MYB2                   ----------->ARR10         <---------AHL20(2)   <------MYB83                  --------->ANAC46         --------->AHL20(2)   <---------MYB46(3)            --------->ANAC58        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               --------->ANAC58       --------->AHL20(2)     <------MYB46(1)              --------->WOX13(1)               ---------       <---------AHL20(2)    <---------TOE1(2)   --------->AHL20(2)  <---------ANAC55(2)    ---------    <---------AHL20(2)       <---------TOE2(2)   <---------AHL20(2) <-------TEIL <---------YAB1  <---   --------->AHL20(2)       <---------MYB52(1)  --------->AHL20(2)<---------GLK1(2)   <------ZmHOX2a(1)   acatattatatatatatatatatatatatcgttggttttcaaaaaaaaaaaaaaatttgatcaagcaagattcgtaatttcttatgaaggacaataatat  11653000     <----------DOF2    <---------DAG2    <---------------AGL15   ----------------->AGL1 --------->ANAC46                              --------->ARR11(3) --------->ANAC58            ------>ZmHOX2a(1) <---------ARR11(3) --------->ANAC58   <---------YAB1    --------->TOE1(3) >AHL20(2)          <---------TOE2(3) --------->TOE2(3)                        ----------->GT1 <----- >YAB1     ----------->GT1---------->ID1 <-----------GT1                   ---------->DOF2     <----- --------GT1       <-----------GT1    <----------DOF2             ---------->DOF2              <-----   cacaagccttttcgagtaaattaacattgtcctcttcaaactttaacaatatctataactatagccaaaaaagattagaaagtgtaatttgaaaatggct  11653100                                                                                               <-----                                                                                               ------                                                                                              <------MYB46(1)                                                                                              <------MYB83                      --------->ANAC58                                                 <---------ICU4                      --------->ANAC58                                              --------->YAB1                <---------TOE1(3)                                                   --------->AHL20(2)                <---------YAB1<----------DOF2                                       <--------ATHB1       --------->YAB1--------->DAG2                                                 <---------AHL20(1)   ---------->DOF2  ---------->DOF2                                 ------->TEIL    <---------ICU4 ----ANAC58     <---------TOE2(3)                              --------->YAB1      <---------ATHB12 ----ANAC58  --------->AHL20(2)                        ---------->ID1 --------->YAB1--------->ATHB51 ----ANAC46  <---------AHL20(2)       <---------------AtSPL8--------->HSFB2a(2)    <---------ATHB51   taggcaaaagcataatttaagataaagcaagtcttttcatatagtacatagttttttgtcttctagcatgaatcagactctatcaataattttggcaggt  11653200                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                       <---------AHL20(2)                                                   <---------YAB1                                                 <---------AHL20(2)                                                 --------->YAB1                                                 <---------ICU4                                                 -------->ATHB1                                                 -------->HAHB4                                                 <--------HAHB4                                                <---------YAB1                                                --------->ICU4               --------->YAB1                                     <-----------GT1--------->AHL20(2)  <---------AHL20(2)          <                              ------>ZmHOX2a(1) <---------ATHB51        --------->AHL20(2)          -                        <---------ALFIN1     <---------AHL20(2)        <---------AHL20(1)           <                        --------->AtMYB61    --------->AHL20(2)        --------->AHL20(2) --------->ANAC58                        --------->ZAT6      --------->AHL20(2)         <---------AHL20(2) --------->ANAC58 ----ARR11(3)          --------->MYB46(3) <----------DOF2      <-----------GT1     <---------ICU4  -- --->ARR11(3)         -------->P<---------CCA1(2)--------->ATHB51      --------->AHL20(1)------>NtERF2   cttagtagaaatagtaccaaaggctaccactcctctatctaacccttttaattattatttatttttcacaaaatttaattcatagttatggcaccccaaa  11653300             <---------YAB1           --------->ATHB51           -------->ATHB1           <---------ICU4          --------->AHL20(2)          <---------AHL20(2)          --------->ICU4                                                     <---------ATHB12          <---------ATHB51                                                   ------------>CBF     --------->ANAC58                                                       --------->ANAC58     --------->ANAC58                                                       --------->ANAC58  --------->TOE1(2)                           <------------CBF           ------------>CBF ---------------AtSPL3                     ----------------->AGL1       --------->ANAC58 -------->DAG2                            ------>NtERF2            <----------DOF2 ---------------AtSPL8          <---------HSFB2a(2)         <---------YAB1 --------->WOX13(1) -------->DOF2<-----------GT1   --------->HSFB2a(2)      <----------DOF2--------->ANAC58    *TSS   aaaaagtacgaaattattacagttttggaggtttctgaaacctctgcctattgtggaggcttttgattcctttgaagcaatcaatgacctctctgtctct  11653400                                                                                                 ----                                                                                           ----------        ---------->DOF2                                                                    --------->ANAC55(2)      <------NtERF2                                                               <---------ANAC58---      <---------At4g35610                                              ------->TEIL <---------CCA1(2)      <---------ZAT2              <---------TOE2(3)                    --------->ARR14(2) <---------TOE2(2)     ------>NtERF2----------->GT1 <---------TOE1(3)      <-----------GT1      ------>ZmHOX2a(1)  <---     --------->ANAC58             <---------YAB1       <---------ARR11(3)     <---------At4g35610<---     --------->ANAC58 <---------AHL20(2)         <-----------GT1       <---------ARR14(2) <---------TOE1(2)    <---------ATERF1(2)  <-----------RAV1(1)  <---------YAB1          <---------GLK1(2)  <-----------RAV1(2)    --------->ATERF1(2) <---------TOE2(3)    --------->AHL20(2)  <-----------GT1  <---------ANAC58<--   catttgccagcaaagagagattgtttaatgttgtttatggttcacatttttatacaatatcacattttcactgaatcttcctctgcgtctctcaggtaat  11653500                                                                      --------->AHL20(2)                                                                      --------->ATHB51                                                                      <---------AHL20(2)                                                                      <--------ATHB1               --                                                                      <---------ICU4             <---                                                                     <---------YAB1              <---                                                                     --------->ICU4             ----- ----->AHL20(2)                                                    --------->YAB1               <---- ->GT1  <----------DOF2                                           --------->ICU4         ============ ------>AHL20(2)                                           -------->HAHB4                <------ZmHOX2a(1) ------AHL20(2)                        --------->ATHB12    --------->ATHB12           =============== ------AHL20(1)                       <---------YAB1      --------->ICU4              <------ZmHOX2a(1) -------AHL20(2)    <---------ATHB12 <----------DOF2  --------->AHL20(2)           <-----------RAV1(2)   ttaattctctcttttctctcccatcactctgtctcttctctttattgggttttagataaaatgatggaataataatttcatggattcaggaggaagaaga  11653600       ---------->DOF2      <---------REM1(1)    <---------At4g35610    <-------GAMYB    --------->At4g35610 ------->WOX13(1) ---ZmHOX2a(2) ------YAB1 ---->ARR11(3) -----ARR11(3)                                                                                 ------ ===HOX2a_HOX2a     ---------->DOF2  --------->ANAC58                      --------->ALFIN1   ------- ===HOX2a_HOX2a    <---------AHL20(2)--------->ANAC58                >>>>>>>>>TBF1           --------   tcattcagttgaagcacacatttaaagggttttgttgagaggcaatggaagggggagaagagtttcaagaagaagaagtgtggtcagttttgagagaaag  11653700                                                                                     --------->ANAC46                                                                                  ---------->DOF2                                                                                 ------>ZmHOX2a(1)                                                                            --------->KAN4(2)                                                                           <---------HSFB2a(1)                  --------->YAB1  <-----------GT1                         <-------TEIL ----->GT1  ------>ZmHOX2a(1)  ----------->GT1                        --------------->AtSPL8       <- -->DAG2<---------ARR11(3)    --------->DAG2                    --------->At4g35610---------->DOF2<-- -->DOF2--------->ARR11(3)   ---------->DOF2              ------>ZmHOX2a(1)--------->HSFB2a(1)<------   tgaaactcaaggtcctgaaatgaaaatgtccaaaagtaacaatctcttctcagcctcttcctcatcttctgcgaggtacattcctaaaggcaacgaggtc  11653800                                 --------->KAN4(2)                                <---------KAN4(1)                                --------->KAN4(1)                                <----------TaMYB80                            <---------ATHB12                     --------->At4g35610                  ----------->RAV1(2)            <---------TOE1(2)                           <-------TEIL     ----------->GT1XXXXXXXXXXXXXXXXXXXXX>MIR828 <---------TOE2(3)            --------->ANAC58 --------HSFB2a(2)--------->At4g35610 ----------->HVH21                       --------->ANAC58------- -------LBD16     <---------At4g35610 ------>ZmHOX2a(1)          ---------->DOF2 --------->RAP2.6(2) ---ARR11(3)  <-----------HVH21------->TEIL      <---------TOE2(2)            --------->ANAC46-------   tctggaggggcaaaacagtcatctgctccaatgaatattcctgactggtccaaggtttatgggtattcaaagaagaacacaagcagccacttgcattcat  11653900  Previous    Next  AGI:  At4g21970.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38947.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) Range:  from: 11653392    to: 11654148    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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