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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                         ------>MYB46(1)
                                                         ------>MYB83
                                                        --------->WOX13(1)
                <---------TOE1(2)                      --------->AtMYB61
        <---------ALFIN1                            ------>NtERF2                             ------
      <-----------HVH21                            --------->LBD16             --------->SPL7 <-----
     --------->AtMYB61                             <---------ETT(1)      -------->P    --------->AHL20(2)
  <---------ALFIN1                  --------->DAG2--------->HSFB2a(2)    ------>MYB83<xxxxxxxxxxxxxx
 --------->MYB46(3) --------->At4g35610       <----------DOF2     <----------DOF2 --------->ANAC46
-----------GT1 ------>ZmHOX2a(1)  ---------->DOF2 <---------HSFB2a(2)    ------>MYB46(1)   ---------
 
tatcaccaccatcacctcctatgaactgaacacattgaaaaggctgtctctttcccgaccaatctgagtctttgccaacccgaacaccgaataaatgacc  11612500
                                                                               --------->TOE1(3)
                                             ----------------->AGL3       --------->CCA1(2)
                                    <---------At4g35610                  --------->ARR14(2)   ------
                                    --------->At4g35610                  <---------ARR11(3)   ------
                                   --------->GLK1(2)            <-----------RAV1(1)      --------->YAB1
----->RAV1(2)            ======================================MADS_MADS <---------ARR14(2)   ------
----bZIP60(2)            <---------------AGL15                 <---------TOE2(3)        <---------YAB1
xxsmallRNA(i)            --------------->AGL15                --------->YAB1   --------->TOE2(3)   -
-->HVH21    <---------AtLEC2  ---------->DOF2<-----------------AGL3      --------->ARR11(3)  -------
 
tggtctgagcctcttccatggctcactactgtataaagaagctgaagctctaaatatagattgaataatgttggaagatataccttcaactatcatcaag  11612600
        ------>ZmHOX2a(2)   ----------->HVH21           ------>MYB46(1)
       <------ZmHOX2a(2)   <---------MYB59              ------>MYB83
      <---------ARR14(2)  ----------->RAV1(2)         <---------MYB59
      --------->ARR14(2)  --------->At4g35610       -------->P
     <---------ARR14(1)   <---------At4g35610       ------>MYB46(1)
    --------->LBD16      ------->TEIL               ------>MYB83                                   -
  <---------LBD16        <-----------ARR10         --------->MYB55(1)                             --
 --------->MYB52(1)      --------->ARR14(2)       <---------MYB111(1)                            ---
--->ANAC58               <---------ARR14(2)       --------->TOE2(2)                             <---
--->AtLEC2             --------->LBD16            <---------MYB59           --------->ARR14(2)  ----
--->ANAC58           <---------LBD16              --------->TOE1(2)         <---------ARR14(2) -----
-------->MYB46(3)  --------->ARR14(2)       --------->LBD16   <---------ARR11(3)         <---------HSFC1(2)
-->WOX13(1)        <---------ARR14(2)       ------>ZmHOX2a(1) --------->ARR11(3)         --------->HSFC1(2)
 
caaacaccggatccaggtccaagacccggacctgacccgaattgttcctgaaacctaccaaataagttcttcaaatgcaaatccattcttgaaacttccc  11612700
           <------ZmHOX2a(2)
           --------->CCA1(2)
          <---------AGP1
          --------->AGP1
          <---------ARR14(2)
          <-----------ARR10
          --------->ARR11(3)                                    <------ZmHOX2a(1)
          <---------ARR11(3)                                   --------->ANAC58
         <---------CCA1(2)                                     --------->ANAC58
        ----------->ARR10                                  --------->ANAC58
     <-----------HVH21                                     --------->ANAC58
  <---------ATHB12                                 ------>ZmHOX2a(1)
-------->AtMYB61                            ------>ZmHOX2a(2)  ----------->GT1
------->MYB46(3)                            ==============HOX2a_HOX2a--------->DAG2
--->NtERF2--------->ARR14(2)                ===========================HOX2a_HOX2a
------ALFIN1                              --------->ARR11(3)  <---------TOE2(2)
----->ANAC46------>ZmHOX2a(2)    <----------DOF2  --------->TOE1(2) ---------->DOF2                -
---->MYB46(3)           ---------->DOF2   <---------ARR11(3)--------->TOE1(2)                -------
 
caccaatgagtcagatctgagtgaaaacaaagctaactttgaaatgatctaatcctacaagaacgcaggaaaaaagtattggtatcagacaataactgga  11612800
                                                                            <---------ATHB12
                                                                       --------->ANAC58
                                                                       --------->ANAC58
                                                                     --------->CCA1(2)
                                                                     --------->GLK1(1)
                                                                    <---------ARR11(3)
                                                                    --------->ARR14(2)
                                                                    <---------ARR14(2)
                                                                    --------->ARR11(3)
                                             ----------->GT1        --------->ARR11(1)            --
       <----------DOF2                  <---------ANAC58          ----------->ARR10             <---
       <---------DAG2                   <---------ANAC58     --------->At4g35610                <---
-------->RVE1(1)                       <---------------AtSPL8<---------At4g35610                <---
---->GT1                           <----------DOF2         <---------HSFB2a(2)        --------->At5g28300
 
aaatatcgaactttttgtaaaacccagaagagtttttgcatttgggtactgtgatttgaatttcagaagaagatatgcaatggtttcgcagttaaacggt  11612900
       ---------->DOF2                                                     --------->MYB52(2)
   ----------->RAV1(1)                                                 <---------ANAC58
  --------->DREB2C(2)                                    ----------->GT1  <---------TOE1(2)
  <---------ETT(1)                          --------->ANAC58           <---------ANAC58           <-
 --------->DEAR3(2)                         --------->ANAC58           <---------ANAC46   --------->AHL20(2)
--------->HVH21                             --------->ANAC46  --------->ICU4 ---------->ID1---------
------MYB46(3)                      <-----------TBP    <---------ORA47(1)<---------MYB52(1)<--------
------ANAC58                      <----------DOF2 <------------CBF<---------AHL20(2)      <---------AHL20(2)
------ANAC58  *TSS                <---------DAG2 --------->ATHB12 <---------ICU4   ----------->GT1<-
 
cgtgaccgacaaaagtcaagagtagagagtagaacaactttttataaacgaaagattggacggtcataaatatttcgtttgtttttttgttaaaaaaatt  11613000
       <---------YAB1
  --------->MYB52(2)                                                                              <-
  <---------MYB46(3)                      --------->ANAC58                                        <-
<---------MYB52(1)                    --------->ANAC58                               <-----------GT1
--------ANAC58                        --------->ANAC58                           <---------AHL20(2)
>AHL20(2)                          <---------SPL7                          --------->YAB1         <-
-AHL20(2)               <---------AHL20(2)--------->ANAC58          <---------ARR14(2)           ---
--------ANAC58         --------->AHL20(2) ----------->GT1           --------->ARR14(2)          <---
 
ttcgtttgttattttagttcaagggattaatttgtagccgtaggcaagaaaaacaaatattggctactatggattcgataatagtttattaccacatttt  11613100
                  --------->ARR14(2)
                  <---------TOE1(2)
                  <---------ARR14(2)                               <---------TOE2(3)
 <---------ARR14(2)                                                <---------YAB1
 --------->ARR14(2)                                    <---------DEAR3(1)
--------ANAC58 --------->ANAC55(2)                     --------->ANAC46
--------ANAC58 <---------ANAC58                       <---------LBD16                              <
--------ANAC46 <---------ANAC55(2)               <---------ANAC58<---------AHL20(2)                -
------->ID1    <---------ANAC58                  <---------ANAC58--------->AHL20(2)        ---------
--------GT1    <---------ANAC46            --------->ATHB12     --------->AHL20(2)      <-----------RAV1(1)
 
ttcgtatttgtgagtgtttcgtattttctatcaatagtcttgaaaatgtttggcttccacggtgcaaattaatattgagtagtaacagttaatgtggcta  11613200
                                                 --------->AGP1
                         --------->YAB1         --------->ZAT2
               <---------ATHB12   --------->TOE1(3)
             --------->WOX13(1)   --------->TOE2(3)
           <---------ATHB12 --------->YAB1      <---------ZAT2
 <-----------GT1         <--------HAHB4         <---------At4g35610
---------AHL20(2)        <---------ICU4         --------->At4g35610
-------->AHL20(2)       --------->ICU4  <---------ICU4                                   --------->AHL20(2)
-->GT1   --------->WOX13(1)<---------YAB1      ------>NtERF2                          ----------->GT1
 
aattaaactcttcaatcaatcaactcgattattatagccttaatagttgccagctctaggtttatttgatggagtcagtttagaagaagagattaaaaac  11613300
                                                                                                 <--
                                                                                                 ---
                                ---------->DOF2                                        <---------YAB1
                            --------->YAB1                 --------->ANAC58            <---------AHL20(2)
                           <---------YAB1                  --------->ANAC58           --------->AHL20(2)
                       ----------->GT1                 --------->YAB1                 <---------AHL20(2)
                    --------->MYB52(1)            ----------->GT1 ---------->DOF2     <---------AHL20(1)
                   ---------->DOF2    ----------->RAV1(1) <---------ICU4    ----------->RAV1(1)  ---
               <----------ID1 <---------YAB1 <---------TOE2(3)  ----------->HVH21     --------->AHL20(1)
 
aaatgtttgcaaaccagaagaacaaagggtatcataaaagacaacattgaggtctgtataataagcactgaaagagagacaacacaaaatataatggggt  11613400
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AGI:  At4g21890.1   
Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO22715.1)
Range:  from: 11611855    to: 11612915    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g21895.1   
Description:  similar to AT hook motif-containing protein [Arabidopsis thaliana] (TAIR:AT5G52890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62564.1); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637)
Range:  from: 11613326    to: 11614953    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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