Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <------NtERF2                                                          <---------ZAT14                                                        <-------MYC3                                                   ------->TEIL  <---------ANAC46             ----------->HVH21           <---------ARR11(3)      --------->ETT(1)         --------->ZAT14              --------->YAB1    ------->MYC3         <---------ZAT14          --------------->AGL15<---------ANAC46      --------->At4g35610   --------->ZAT6<------ZmHOX2a(2)    <-----------HVH21  --------->ANAC46 ------->ARR14(2)     --------->TOE2(3)  --------->ARR11(3)   <-----------RAV1(1)<-------TEIL   aaatactcttctgcagtgacaaatccataaactctaccaataagatcaagatgaaccgcgtgttctgtcggagagaacacacatacaccagtctcattca  11534500                                                                                                    <                                                                                          -------->P<                                                                                       <---------ANAC58                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)          --------->TOE2(3)                                  ---------->DOF2         <-----------GT1<          --------->TOE1(3)                          ---------->DOF2   --------->ATHB12<---------ANAC58   tccatttcgaaacctgaatttgaaaaattctaaagtttagttttttttctcggtgtaaagagggaaagagacttgatttgtatagaattacttacctcga  11534600                                --------->DOF5.7(2)                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            <---------ARR14(2)                            --------->ARR14(2)                            --------->ARR11(3)                            <---------ARR14(3)       <------ZmHOX2a(1)    --------->ARR14(3)                        <---------At5g28300       ==============================HOX2a_HOX2a                     <-----------GT1       =============================HOX2a_HOX2a                 <----------DOF2                  <---  --------->ALFIN1          <---------ARR11(3)            ------->GAMYB                         <---- ---------ANAC58 <---------ANAC58                      ----------->RAV1(1)                    <------ ---------ANAC46 <---------ANAC58                    --------->At4g35610                      ------- ---------ANAC58 <---------ANAC46 <---------DOF5.7(2)<---------At4g35610        ------->TEIL <-------   gagcgtggaggaagcgtttgcgtctacgaagatcgtgaacgatgcgaataagttcagcaacagagacttttttaccgcattgaacccagttttggagttc  11534700                                                                                                <----                                                                                                <----                                                                                                -----                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                    --------->At4g35610                                                                                    --------->ZAT2                                                                                --------->ARR14(2)                                                                                <---------ARR11(3)                                                                                <---------ARR14(2)                                                       <----------DOF2          <-----------ARR10                                                   <---------ANAC58       ----------->GT1  --------->ANAC58                                                   <---------ANAC58     <---------ZAT18    --------->ANAC58 ------ANAC46                <------ZmHOX2a(1)     <---------ANAC46     <---------ZAT14   --------->WOX13(1) -----LBD16              --------->MYB52(1)  --------->DAG2             --------->ZAT18--------->ANAC58 ---ARR14(2)             ---------->DOF2    ---------->DOF2             --------->ZAT14--------->ANAC58 -->ARR14(2)            ------>ZmHOX2a(1)   <---------ZAT14        <---------MYB52(1)  --------->ANAC46 --GLK1(1)         <---------GLK1(1)        --------->ZAT14 <-----------GT1     --------->ARR11(3)   tgggtaaacacttgattttgggtctcctaaaggactgatttttgagtaaagtgtcgtcttttttactctgttagtgtagtaatatctgctcgcaatcaaa  11534800      --------->GLK1(1)          ------>NtERF2      <---------GLK1(1)          --------->LBD16    <------NtERF2               <---------ANAC46   --------->LBD16             <---------LBD16  --------->LBD16            <---------ARR14(2) <---------LBD16             --------->ARR14(2)            *TSS -----GLK1(2)              <---------MYB46(3)       --------->ATHB12 -----ARR14(2)             <---------DEAR3(2)   <---------WRKY45 ---->ARR14(2)        <-------TEIL         --------->ARR14(2) ->YAB1           --------->ARR14(2)       <---------ARR11(3)              --------->AHL20(2) ->AHL20(2)       <---------ARR14(2)       --------->ARR11(3)          ----------->GT1  <---------TOE2(3) -ATHB12          <---------ARR11(3)       <---------ARR14(2)<----------DOF2          ---------->DOF2   ttcgccggaattcgtctcagtatattcatcggttccggcgaagaagatagtcaaagattgagactttacaaaaatgaaaaaatacaaataaaggttgaaa  11534900          <-----------------------TaNAC69(2)       <------------CBF                                 ------->TEIL      <---------ICU4                 <---------YAB1    <---------GLK1(2)      --------->ATHB12             <---------ICU4      <---------CCA1(2)     <---------YAB1                --------->YAB1  <---------At4g35610                  ---------->DOF2     --------->ICU4               <---------YAB1   ----------->RAV1(2)        --------->ZAT6   --------->YAB1            <----------DOF2       --------->At4g35610      <-----------GT1  <---------YAB1     --------->TOE2(3)         <-----------GT1             <-----------GT1   gtttatgataattgcatattaagcctcaaaacttttattattatctaatttacacctgaatctttctattgaacattttaactctcaaataaaagctatg  11535000                                                                                  --------->HSFB2a(2)                                                --------->ANAC46                  <---------HSFB2a(2)    <------ZmHOX2a(1)                           --------->ANAC58           <---------ZAT18   ----------->GT1                    <----------DOF2                      --------->ZAT14         <-  <---------TOE2(3)            <-----------GT1  --------->ANAC58     --------->GLK1(2) --------->At4g35610   ttttgaggaaaaaaaaaaaaaaaaactatgttttatcaagcttttggtacacgcataaacttgatatcaagagtctgtggacttggagaagcagaggttt  11535100                                                                           <---------HSFB2a(2)                                                                           --------->HSFB2a(2)                              <----------DOF2                          <---------ANAC58                         <---------RAP2.6(2)                           <---------ANAC58                         <---------ANAC58                             <---------HSFC1(2)                         <---------ANAC58                     <---------At4g35610            <-------                    --------->ATHB12                          <---------ZAT2   --------->ANAC58                    <---------ICU4                            --------->At4g35610            <-------                   <---------YAB1             <---------At4g35610     --------->HSFC1(2)     <-------  --------->YAB1  <---------GLK1(2)           --------->At4g35610    --------->GLK1(2) <---------TOE2(3) ---------DOF2  <---------ATHB12              <---------ZAT2  --------->ZAT2   --------->ANAC58   tctttgataacattcccaaagattattgcggtcttttctagtcttcttagctgctaatatcgtaagctgagaagcttgtggaagccatgaaggaagcgtg  11535200                         --------->YAB1                        <<<<<<<<<ARR1                                              <---------------AGL15                ----------->GT1                                                   <---------ANAC58              <-------MYC3      <---------YAB1               ----------->GT1      <---------ANAC58     --------->AtLEC2   <<<<<<<<<ARR2      --------->YAB1 <---------AtLEC2        <---------ANAC46   <---------AtLEC2<-----------GT1 ------->TEIL          <-------TEIL           <---------YAB1 --ANAC46     ------->MYC3  <---------TOE1(2)        ------->TEIL           ------>ZmHOX2a(2) --ANAC58    --------->ANAC46 --------->YAB1    <---------At4g35610       --------->ARR11(3) --ANAC58  <---------ALFIN1 <---------TOE2(2)   --------->At4g35610       <---------ARR11(3)   tgtttccatggacacacgttgttacaatcgtatgatgaatatgtataatcagatgaatgtgcatggaaaattagatgatctgatgcttgaaatggagaag  11535300                                                      <---------At4g35610                                                      --------->At4g35610                                                      <---------ZAT2                               <-                                                   <---------At4g35610                            ---                                                --------->At4g35610                             <----                                               <-----------RAV1(1)                            -------                                              ------->MYC3                                    <------                                              ------->MYC2                                   --------                    <-----------GT1           <-------MYC3                                   <-------            <-----------GT1                   <-------MYC2                ----------->GT1---------->DOF2        <----------DOF2                   <---------ZAT18    <---------YAB1        --------->TOE2(3)   aatggagtctcttttgaccaatttactcttagtattcgtctcagtgcatatgctgcagctactaatattgaaggaatagagaaaaccatagaaaagatat  11535400  Previous    Next  AGI:  At4g21705.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G20710.1); similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G60770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41302.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 11532983    to: 11534859    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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