Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <------NtERF2                                         --------->At4g35610                                       --------->ZAT18                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                    <xxxxxxxxxxxxxxxxsmallRNA(s)                                   <xxxxxxxxxxxxxxxxsmallRNA(s)                                  <----------DOF2                                  xxxxxxxxxxxxxxxx>smallRNA(i)                               xxxxxxxxxxxxxxxx>smallRNA(s)                             xxxxxxxxxxxxxxxx>smallRNA(s)                             <xxxxxxxxxxxxxxxxsmallRNA(s)                            xxxxxxxxxxxxxxxx>smallRNA(s)                           xxxxxxxxxxxxxxxx>smallRNA(i)                           xxxxxxxxxxxxxxxx>smallRNA(s)                          xxxxxxxxxxxxxxxx>smallRNA(i)                          xxxxxxxxxxxxxxxx>smallRNA(s)                         <xxxxxxxxxxxxxxxxsmallRNA(s)                         xxxxxxxxxxxxxxxx>smallRNA(s)                         <xxxxxxxxxxxxxxxxsmallRNA(i)                        <xxxxxxxxxxxxxxxxsmallRNA(i)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        xxxxxxxxxxxxxxxx>smallRNA(s)                        <xxxxxxxxxxxxxxxxsmallRNA(s)                        xxxxxxxxxxxxxxxx>smallRNA(i)                       xxxxxxxxxxxxxxxx>smallRNA(s)                      xxxxxxxxxxxxxxxx>smallRNA(s)                      <xxxxxxxxxxxxxxxxsmallRNA(i)                     xxxxxxxxxxxxxxxx>smallRNA(s)                   <xxxxxxxxxxxxxxxxsmallRNA(s)                   xxxxxxxxxxxxxxxx>smallRNA(s)                   <xxxxxxxxxxxxxxxxsmallRNA(i)                  <xxxxxxxxxxxxxxxxsmallRNA(i)                  <xxxxxxxxxxxxxxxxsmallRNA(s)                 <xxxxxxxxxxxxxxxxsmallRNA(i)                --------->LBD16xxxxxxxxxxxxxxxx>smallRNA(i)                --------->At4g35610<xxxxxxxxxxxxxxxxsmallRNA(i)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <xxxxxxxxxxxxxxxxsmallRNA(s)                                                <---------ANAC58              <xxxxxxxxxxxxxxxxsmallRNA(i)                                    --------->YAB1              xxxxxxxxxxxxxxxx>smallRNA(i)  ------>NtERF2     <---------TOE1(2)           <---------ANAC58              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <---------ZAT6      <--------HAHB4             <xxxxxxxxxxxxxxxxsmallRNA(s)<---------At4g35610  <---------TOE2(2)         <---------ANAC46           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->YAB1           --------->ATHB12    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)          <---------ICU4    xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(i) <---------TOE1(3)         <---------ANAC58   xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------YAB1      <--- ----------AGL3<xxxxxxxxxxxxxxxxsmallRNA(s) <---------ATERF1(1)              <---------ATHB12  ------ >SPL7   <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(s)           --------->ICU4    <----- -->AtSPL8<xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(i)  <---------YAB1      <---------ANAC58 -->AtSPL3<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------>NtERF2  <---------TOE2(3)--------->TOE2(3) ----   aaatgagatggactaaaccgcagacaaattagaccgctttgtccgctgcctccattcatagtcttaggttatgtttctaatcattagatagcgcgtgagc  11231000                          <-------TEIL                      --------------->AtSPL8                      --------------->AtSPL3                      ------->TEIL                     <---------DOF5.7(2)                   ----------->HVH21                  ------->PIF4                  <-------MYC3                  ------->MYC3                  <-------PIF4                  <-------PIF5                  <-------MYC2                  ------->MYC2                  ------->PIF5                  ------->MYC4                  <-------MYC4                 <---------TGA1a                 --------->ANAC55(2)                 <---------ANAC55(2)                 --------->ANAC58           ================bZIP_DOF                              <-----------HVH21           ---------->DOF2------->TEIL                          --------->bZIP60(2)       <-------TEIL--------->DOF5.7(2)                    --------->CCA1(1)                      ---- ------ZAT18     --------->TGA1a                          --------->RVE1(1)--------->AHL20(2)<------- --->At4g35610   --------->ANAC58                   ----------->GT1        <---------AHL20(2)-------- ----At4g35610 <------------OsbHLH66             ------>ZmHOX2a(1)     <---------AHL20(2)    -------- ----->ZAT18--------->ANAC46       <-----------GT1  --------->YAB1    <---------AHL20(1)     <-------   acacatatattcatacagcacgtgaacgtacatgttttcacatactatctcctatagtaaatatccatgtcatatatttatatagttggacttaattaat  11231100                                           <---------AHL20(2)          --------->TOE2(3)               --------->AHL20(2)    <-----------GT1           <----------DOF2                      --------->YAB1 ------->GT1                 <---------ANAC58           <---------AHL20(2)                         <- --AHL20(2)                  <---------ANAC58      <---------YAB1 <---------YAB1                  --- ->AHL20(2)               <---------GLK1(1)--------->AHL20(2) <---------ANAC58          --------->ANAC58 ->AHL20(1)        --------->ZAT6      <---------AHL20(2)     <---------ANAC58          --------->ANAC58 --AHL20(1)        <-----------GT1 ------>ZmHOX2a(1)   --------->AHL20(2)   <-----------GT1   <------   tgttaattacattctcaattttcactagatttctttcctgtttatttaattttctgatttaatagcttatcaaaattttcacatactgacaagaattaac  11231200                                                ------>ZmHOX2a(2)                                               <------ZmHOX2a(2)                                              --------->ARR14(2)                                              --------->ARR11(3)                                              --------->AGP1              --------->WRKY45                                     --------->ALFIN1                 <---------YAB1                           --------->TOE2(3)  <---------AGP1   <-----------GT1                         <---------TOE2(3)    <---------ARR11(3)     <---------ARR11(3)                     --------->TOE1(3)        <---------ARR14(2) --------->ZAT6                   ---                     --------->TOE2(3)--------->REM1(2)  --------->AHL20(2)           --------->TOE1(3)               --------->At4g35610 <---------ANAC58      <---------AHL20(2)           --------->TOE2(3) --------MYB52(1)  -------->P      <---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     --- ------>TOE2(3)<---------At4g35610 <---------ANAC46   <---------GLK1(2) <----------DOF2------>ZmHOX2a(1) -----GT1<-----------GT1--------->MYB52(1)  ----------->ARR10--------->AHL20(2)  --------->ZAT6   ---   ccttagtttttttactaagcttaccctaacgtttatggtgtgtagatagatcttcagattttattaaacactatctttgactaactctccttaaatgttc  11231300                                             --------->YAB1                                            <------ZmHOX2a(2)      <---------AHL20(2)                                            <---------YAB1         --------->AHL20(2)                                           --------->ARR11(3) ------>ZmHOX2a(2)                                           <---------ARR11(3)<------ZmHOX2a(2)             ----------->TBP           ---------->DOF2      --------->ARR14(3)        ------->TEIL                ------->GAMYB           --------->ARR14(2)       <---------ARR11(3)        ----------->RAV1(1)        <---------ARR14(2)     --------->ANAC58           --------->ANAC46            <---------ARR14(3)     --------->ANAC58         --------->HSFB2a(2)           --------->ARR11(3) ------>ANAC58                --------->ANAC46              <---------ARR11(3)                   ---- ------>ANAC58               ----------------->AGL1         <---------AGP1                      ----- ------>ANAC46               ----------------->AG         ----------->ARR10       <----------DOF2<---   acgccccaagaacctatataagaatacactttccacaacagaaaagatcatagtaacaagaagatcttataaattaagtcttcgcgtttttggagaaatt  11231400                                                                                     --------->ALFIN1                                                                                   xxxxxxxxxxxxxxxxxx                                                                                --------->LBD16                                                                               --------->DEAR3(1)                                                                             ------>NtERF2                                                                            --------->AtMYB61                                                                            --------->ANAC46                                                                           --------->MYB46(3)                                                                           <------NtERF2                                                                           <---------MYB55(2)       -------->P                                                          <---------ABI4(2)   <-----------GT1                                                        ------>NtERF2 --------->AHL20(2)                                                      --------->PCF2 ----->AHL20(2)            --------->ATHB51            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ---->AHL20(2)             <---------AHL20(2)  <---------ATHB12 ------->TEIL<---------ALFIN1 ------AHL20(2)       --------->ICU4     <-----------GT1 --------->AHL20(2)----------->HVH21    -----   aaaataaacaacctctcgagagaaatgaataatttgaatgtttttacaaatgaagacaatgaaatgaatgtgatgcccccaccgcgagtgtgtccaaggt  11231500                                                     --------->ANAC58                     <---------At4g35610             --------->ANAC58                  <-------TEIL                       --------->ANAC46                --------->ARR14(2)                  --------->ZAT18                <---------GLK1(2)                   <---------ZAT18                  <xxxxxxxxxxxxxxx                <---------ARR14(2)                 ------->GAMYB   --------->ICU4    <xxxxxxxxxxxxxxx       <------ZmHOX2a(2)       --------->MYB46(3)  --------->DEAR3(1)           <-----------RAV1(1) xxxxx>smallRNA(fl3) --------->At4g35610          --------->MYB46(3)           --------->ARR11(3) ------>GT1 ----------------->AGL2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------REM1(1)         <   gttattccgatcaaaccagattcagctacttcaacaacaacaagaagtctcaaccgcgctacaaatgcaagaattgttgtagatgttggactcatggtgg  11231600                <-----------HVH21                                                           <------ZmHOX2a(2)            --------->MYB52(1)                                                              ---------         --------->HSFB2a(1)                                                               <---------ARR11(3)         <---------HSFB2a(1)                                                               --------->ARR11(3)      <------ZmHOX2a(1)                                                                    --------->AGP1    <---------------AtSPL8                                                                --------->GLK1(1)    <---------TOE1(3)                                                            ------>ZmHOX2a(2)    <---------TOE2(3)                                                          <---------ARR11(3) xxxxxxxsmallRNA(fl3)       --------->ANAC55(2)          <------ZmHOX2a(2)     --------->ARR11(3)  -- xxxxxxxxsmallRNA(fl3)      <---------ANAC55(2) --------->LBD16     --------->ARR14(2)   ----------->ARR10 ----------DOF2--------->ANAC46           <---------ATHB12 --------->WOX13(1)<---------ATHB12      --   agttttaaggaacataccagtcactggaatatgtgataaatccaatcttccgaagatagatcaatcttcggtttctcaaatgatcttggctgagatccaa  11231700           ------->TEIL      <---------ICU4      --------->YAB1     <---------ATHB12                                                     <-----------RAV1(1)     --------->ICU4                                                    <---------------AGL15   --------->WOX13(1)                                    <<<<<<<<<TBF1 --------------->AGL15 >CCA1(2)  -------->P--------->AHL20(2)               <<<<<<<<<TBF1   <-----------------AGL2 ------->ANAC58      <---------AHL20(1)        <---------ZAT6         <-----------------AGL3       <- ------->ANAC58      <---------AHL20(2)    <---------MYB52(1)  <---------At4g35610           --------   caaggcaatcatcaacctttcaaaaaatttcaagaaaacatttcagttagtgtttcttcttcttcagatgtttctattgttgggaaccatttcgatgatt  11231800  --------->ZAT18  <---------ZAT14  --------->ZAT14                                           <---------GLK1(2)  <---------ZAT18                                           --------->ARR11(3)         --------->ARR11(3) --------ANAC46                                      ------>ZmHOX2a(2)   --------->GLK1(2)  <-------- ->ATHB12                  --------->ANAC46<-----------GT1----------->ARR10            <---------ARR11(3)   tgagtgaacttcatggtataacaaattctactccaattcgaagttttacaatggatcgcttagattttggtgaagaatcgtttcaacaagatttatacga  11231900  Previous    Next  AGI:  At4g21030.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF4.2 (DOF4.2) [Arabidopsis Thaliana] (GB:Q9SUB1); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21050.1); similar to elicitor-responsive Dof protein ERDP [Pisum sativum] (GB:BAA85655.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 11231425    to: 11232009    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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