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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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        --------->ANAC58                                                      --------->AtLEC2
        --------->ANAC46                                     ----------------->AGL3
        --------->ANAC58                              --------->YAB1          --------->ANAC58
        --------->ANAC55(2)                           <---------ICU4          --------->ANAC58
        --------->ANAC55(1)                          --------->ICU4         <---------AtLEC2
-------CCA1(2) --------->AHL20(2)                  --------->YAB1         <---------YAB1         ---
-->GAMYB----------->GT1 <---------HSFB2a(2)     --------->YAB1         --------->ARR14(2)        ---
-------MYB.PH3(1)  <---------AHL20(2)    --------->ATHB12    ----------------->AGL2              ---
---At5g28300  --------->AHL20(1) <-------TEIL --------->AHL20(2)  --------->MYB52(1)          ------
----GT1 <---------ANAC55(2)---------->DOF2   <---------AHL20(2)   --------->YAB1              <-----
->MYB52(1)    <---------AHL20(1)--------->CCA1(2)--------->AHL20(2)    <---------MYB52(1)    <------ZmHOX2a(1)
 
gtctcttgaaaacgtaatatatataatcgagaaagattcaaaattgatttaaaataataatcaaaccaataacagttatgcatgcaagaagttagaggaa  11002600
    ----------->GT1
  <-----------RAV1(2)
 <---------ZAT2
 --------->At4g35610
 <---------At4g35610                --------->YAB1
 --------->ZAT2                    --------->ICU4
----------->RAV1(1)               <---------KAN4(2)                                --------->TOE2(3)
------>ANAC58                ---------->DOF2                             <---------TOE1(2)      <---
------>ANAC46             XXXXXXXXXXXXXXXXXXX>MIR156G                    <---------TOE2(3)      ----
------>ANAC58           ---------->DOF2                                  <---------TOE1(3)--------->CCA1(2)
--->ARR14(2)          --------->ANAC58                              <---------ARR11(3)   <---------ARR11(3)
----ARR14(2)          --------->ANAC58                             <---------CCA1(2)     --------->ARR11(3)
 
acgcagcaggtatatagatgaggctacgaaagaaaagaatgatcaaatctagttacgcttaaatttggatatatctaaggtttcttcgtcaatatatgga  11002700
                      <---------TOE2(1)
                      <---------TOE1(1)                                            <---------HSFB2a(1)
                    --------->CCA1(2)                                              --------->HSFB2a(1)
                  <---------At4g35610                                              <---------HSFC1(2)
            --------->DAG2                                                         --------->HSFC1(2)
         ---------->DOF2                                                    <---------REM1(1)
       --------->ANAC58   <------ZmHOX2a(1)       ========================HOX2a_HOX2a
       --------->ANAC58 --------->ANAC46    --------->CCA1(2)     --------->ARR11(3)
 --------->ANAC58 --------->At4g35610  --------->YAB1             <---------ARR11(3)
 --------->ANAC58 <---------ZAT2      <---------ATHB12    <------ZmHOX2a(1) --------->ALFIN1
------At4g35610 --------->ZAT18     --------->WOX13(1)    ================HOX2a_HOX2a
----->At4g35610 <---------ZAT18   <---------ATHB12<------ZmHOX2a(1)<------ZmHOX2a(2)
 
gcttacgaaaacgaaagagtgagctacgaggaactaaatcaatgaagataagaggaatgaaggagagaagatcaccaaggtgtagaaatttctgaagtcg  11002800
                                                          --------->YAB1
                                                        --------->ICU4
                                                        <---------MYB52(1)                         -
                                                   --------->ANAC58                                -
                            --------->ARR11(3)     --------->ANAC46                              ---
             --------->ATHB12                      --------->ANAC58                  --------->TOE2(3)
          --------------->AGL15                --------->CCA1(2)                     --------->TOE1(3)
         <-----------------AG                  <------ZmHOX2a(2)                 ----------->HVH21 -
 ------>ZmHOX2a(1)   <---------MYB46(3)       --------->AGP1 <-----------GT1 --------->ICU4      <--
 
tctcctccaatctccactattggtttgttcagaacttgagaaggccttagatccaagccattagtaacctctctatggccataagtgaccttaagagaga  11002900
                                                     ------>ZmHOX2a(2)
                                                    <------ZmHOX2a(2)
                                                    --------->GLK1(1)
                                                   --------->ARR14(2)
                                                   <---------AGP1
                                                   <---------ARR14(2)
                                                   --------->ARR11(3)
                                                   <---------ARR11(3)
                                                   --------->GLK1(2)
                                          --------->AtMYB61                                 --------
                                      --------->DEAR3(1)                                    <-------
                                      <---------ETT(2)          ---------->DOF2      ------>ZmHOX2a(2)
       ---------->DOF2     ----------->RAV1(1)     <-----------ARR10               <---------ARR11(3)
----->MYB46(1)       <---------ARR11(3)------>NtERF2<---------GLK1(1)              <---------AGP1
------->P    <------ZmHOX2a(2)        <---------ETT(1)         <XXXXXXXXXXXXXXXXXXXXMIR861-3P
------>AtMYB61       --------->ARR11(3)--------->ORA47(1) --------->ANAC46         --------->ARR11(3)
----->MYB83<------ZmHOX2a(1) --------->MYB46(3)    <---------ARR14(3)             <---------CCA1(2)<
-------MYB59--------->ARR11(3)  <---------ALFIN1  <------ZmHOX2a(1)         --------->ARR11(3)   ---
 
ccaacctcgtgaaaggatcaagaacatctccaacaacactgccgaccacaagaggatctctacgacttaaagacatatttatcttggatctcaagtatct  11003000
                                                                      <---------ICU4
                                                                      <--------HAHB4
                                                                      <--------ATHB1
                                                                      --------->YAB1
                                                                      --------->ATHB12
                                                                      --------->ATHB51
                                                                     <---------ATHB51
                                                                     <---------ATHB12
      *TSS                ------->TEIL       --------->AHL20(2)    --------------->AGL15
--------->YAB1     <---------DAG2            <-----------TBP       <---------------AGL15
->ARR11(3) <---------ANAC58      <---------ANAC58             --------->GLK1(1)
--ARR11(3) <---------ANAC58   <---------MYB52(1)   <---------TOE2(3) --------->ICU4            -----
---------ATHB12    --------->TOE2(3)       <----------DOF2    <------------CBF       <----------DOF2
------>WOX13(1) <-----------GT1  <---------ANAC58 <-----------GT1------------>CBF    <---------DAG2<
 
caatcaaatgttttgcttcttaccttatgaacccttacttgctattctttatataacgttttgggaattgcaataattagctatttagctttattctctc  11003100
                                                                <---------CCA1(2)
                                                            <---------ANAC55(2)
                                                            <---------ANAC46
                                                           <---------TOE1(2)
                                                           <-------TEIL
                                                           <---------TOE2(2)
                                            --------->REM1(1)  ------->TEIL
                                       --------->ARR14(2)  ------->TEIL
     --------->ATHB12              --------->HSFB2a(2)   <---------SPL7
     <---------ICU4   <---------ANAC58 <---------ARR14(2)--------->TOE2(2)
     --------->YAB1   <---------ANAC58 --------->GLK1(2) --------->TOE1(2)
    <---------ATHB12  <---------ANAC46<---------GLK1(2)<---------------AtSPL3
    --------->ICU4<----------DOF2  <---------HSFB2a(2) --------------->AtSPL8                     <-
------->CBF<---------LBD16         --------->HSFC1(1)<---------WRKY38(1) <---------YAB1      <------
---------ATHB12<---------ARR11(3) <---------ANAC46   <---------WRKY12  --------->YAB1     <---------
 
caatgaaatcattaccagggtcttttcgtgtatagtttcgagaatctacaactcgttcaacgtacgtatatcacttataattcatgttttttttttcttt  11003200
                                                                                               -----
                                                                                               -----
                                   ------>MYB83                                              <------
                                   ------>MYB46(1)                                           <------
                                   -------->P   ----------->GT1                             <-------
  <-----------GT1                  --------->MYB52(1)                           <---------ALFIN1
---------DOF2        <---------YAB1----------->RAV1(1)   --------->YAB1  --------->ANAC46   --------
----DOF2  <---------AHL20(2)      --------->ANAC46    --------->YAB1   <-----------GT1   <---------ANAC58
--GT1    --------->AHL20(2)      --------->MYB46(3)  --------->ICU4  --------->AHL20(2)  <---------ANAC58
 
ccttttttctaaatttatagtattcttattccaaaacccaccagtataaaacagaaataatcatattccaaattatacatcatccacttgtttcttgcta  11003300
                                                                                                ----
                                                                                                ----
                                                                                                <---
                                                                                             -------
                                                                                             -------
                                                                                            <-------
                                                                                           ---------
                                                                                           ---------
                                                                                           ---------
                                                                                           ---------
                                                                                          <-------TEIL
                                                                                          ------->TEIL
        <---------AHL20(2)                                                                --------->SPL7
      ----------->GT1     <---------ICU4                                                <---------SPL7
      --------->ANAC55(2) --------->YAB1                       --------->ANAC58        <---------ANAC58
      <---------ANAC55(2) --------->ATHB12                     --------->ANAC58        <---------ANAC46
---->ANAC58              <---------YAB1                  <-----------HVH21             <---------ANAC58
---->ANAC58  <---------AHL20(2)                       <---------ICU4                  <-------------
---ANAC58   --------->AHL20(2)                     --------->YAB1--------->YAB1   <---------ARR14(2)
---ANAC58   <---------AHL20(2)                   --------->AHL20(2)               --------->ARR14(2)
--STY1(2)   --------->AHL20(1)                  --------->AHL20(2)         --------->At4g35610  ----
->STY1(2)   <---------AHL20(1)  <-----------GT1 <---------AHL20(2)  --------->AHL20(2)--------------
 
gccactagtatgtaatttattctgacttatcattgtaacttcatgaactatttaaaataatgtcacaagcatataatatgctgcatatttgcgtacgtca  11003400
      <-----------HVH21
     <---------ANAC58
     <---------ANAC58
     --------->ANAC46
----->ANAC58
----->ANAC58
------ANAC55(2)
---->HVH21   <-----------HVH21
-->TGA2(2)  --------->bZIP60(2)
----HVH21   --------->ANAC46
>ANAC46   --------->ANAC55(2)
>ANAC58   <---------O2 --------->AHL20(2)                                                     ------
>ANAC55(2)--------->O2 <---------AHL20(2)                                                     ------
>ANAC58----------->HVH21            --------->ZAT18                                           <-----
--AtSPL3  <---------TGA1a        <---------TOE1(3)             <---------YAB1     <-----------GT1
----->ANAC55(2)   <---------ATHB12 <------ZmHOX2a(1)    <---------YAB1  ------->TEIL    ------>ZmHOX2a(1)
->AtSPL3  <---------ANAC55(2)    <---------TOE2(3)      <---------ANAC55(2)    --------->YAB1 ------
 
cgcattttgcgtcacatgtcactcatttaaatagttaaggacactacattacaccgattatgtatgatgttaatgcattttagaataactccttcaacct  11003500
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AGI:  At4g20370.1   
Description:  TSF (TWIN SISTER OF FT); phosphatidylethanolamine binding. Identical to Protein TWIN SISTER of FT (TSF) [Arabidopsis Thaliana] (GB:Q9S7R5); similar to FT (FLOWERING LOCUS T) [Arabidopsis thaliana] (TAIR:AT1G65480.1); similar to FTL2 [Cucurbita moschata] (GB:ABR20499.1); contains InterPro domain Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); contains InterPro domain Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858)
Range:  from: 11000782    to: 11003007    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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