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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                 --------->YAB1
              <---------ICU4
  --------->ARR11(3)
  <---------ARR11(3)                                                     <---------ATHB12
-------->DOF2 --------->YAB1                                             --------->MYB46(3)       <-
---->YAB1    <---------YAB1         <-----------GT1  --------->DOF5.7(2)-------->P                <-
----YAB1   --------->YAB1      ----------->GT1--------->ZAT6          --------->MYB46(3)          <-
 
ataaagaccctcgtttataatcacattcaacacagagttaaacgacttaacactacgtttacatcgaaactcatcaaccattctatgaaacaagtctaca  10870000
                <----------DOF2
     --------->AtLEC2
     --------->ANAC58
     --------->ANAC58
---------DOF2  <---------ANAC58              ------->TEIL
--------DAG2   <---------ANAC58---------->DOF2                     --------->ZAT14            <-----
--------------AGL15    ---------->DOF2     --------->YAB1 --------->YAB1                  ----------
 
gctttatcaggcaaatgtgctttcccataagctctaaagacaacaatgaaactacgctctataatcactctgttctctaatctaattcgactcaaaagct  10870100
                                       --------->YAB1
                                       --------->ATHB12
                                       --------->ATHB51
                                       <------------ATHB5                                        <--
                                       -------->ATHB1                       <-----------------AG<---
                                      <---------ATHB12                      <-----------------AGL1
                                    --------->WOX13(1)        --------->MYB46(3)               -----
                                   ------------>ATHB5         <---------MYB55(2)               <----
                          <---------ANAC46        --------->DAG2------>MYB83<-----------------AGL3
                          <---------ANAC58       ---------->DOF2------>MYB46(1)         <---------At4g35610
                     <---------ARR14(2)<---------ICU4        --------->ANAC58           <---------ZAT2
   <---------MYB59   --------->ARR14(2)<--------ATHB1        --------->ANAC58           --------->At4g35610
----GLK1(2)     <-----------------AGL1--------->ICU4         --------->ANAC46--------------->AGL15
>DOF2   --------->YAB1    <---------ANAC58     --------->ARR11(3)     ---------->DOF2   --------->ZAT2
 
tctctaccgaatcaaaatcacccgaattggcgtaactctcaatcattgaagataaagtagaatcacccaacttgaaagaacccattttgggagctgattt  10870200
                                   --------->ANAC46
                                   <---------ALFIN1
                             <---------ARR14(2)
         --------->LBD16     --------->ARR14(2)               <---------ARR14(2)
--------->ARR11(3)           <---------GLK1(2)    <---------ANAC46
<---------ARR11(3)        <---------ATHB12       <---------LBD16
---------GT1         >>>>>>>>>>>>>>>>>LFY      ----------->HVH21
--------GT1          <<<<<<<<<<<<<<<<<LFY      --------->WRKY12
---->AHL20(2)     <---------At4g35610 <---------ALFIN1<--------P
-----AHL20(2)     --------->At4g35610 --------->AtMYB61   <------ZmHOX2a(1)
 
aaacatcttctccgagattggagcttccaatggattctccaccacttccattgacgggttaggagaaaccgaaacagaagaagagaagcgaagatggata  10870300
                                                              --------->ANAC55(2)
                                                              <---------ANAC55(2)
                                                             <---------LBD16
                                                           <---------ARR14(2)
                              <----------DOF2              --------->ARR14(2)
                       --------->ARR14(2)              <---------At4g35610
                       <---------ARR14(2)     --------->At4g35610--------->ARR14(2)
                      <------ZmHOX2a(1)       <---------At4g35610<---------ARR14(2)             <---
                  ---------->DOF2       ---------->DOF2--------->At4g35610                ------->TEIL
                --------->ANAC46  <----------DOF2     --------->GLK1(2)       <----------DOF2   <---
 
gagaagttaactgggttactcgaaaggattcgactttctttgagaaagtagctgaagaagctgatacggattgggattgggcatttgggcatgaactcgt  10870400
                                       ---------->ID1
                                      <------MYB46(1)
                                      <---------ANAC46
                                      <---------ANAC58
                                      <------MYB83
                                      <---------ANAC58
                          --------->GLK1(1)
    <---------YAB1   <---------LBD16 --------->MYB111(2)
------TOE2(2)  <---------MYB52(1)    --------->MYB46(2)                                    ---------
------TOE1(2)<-----------------AGL3  <---------AtMYB61        ---------->DOF2              <--------
 
agggtttatgcttaaacccttatttggggatttcaaaagtttggtgttttcgcaagagagagagagaaagagatagagatgatgcaactcttacagctct  10870500
                                     <---------GLK1(1)
                                     --------->CCA1(2)
                                    <---------ARR11(3)
                                    --------->ARR14(2)
                                    <---------ARR14(2)
                                    --------->ARR11(3)
                        <---------YAB1                     <-------GAMYB
                   --------->CCA1(2)<---------ARR14(3)    --------->MYB52(2)
       <---------ARR14(2)           --------->ARR14(3)    <---------MYB46(3)
       --------->ARR14(2) <------------CBF  ------------>CBF
>At4g35610         --------->At4g35610      <------ZmHOX2a(2)                         <---------At4g35610
-At4g35610  ---------->DOF2       ----------->ARR10  <---------TOE2(3)           <---------GLK1(1)
 
ctcatttgcagatttgaaagagagatgaagattgaagaagatattcgatcaatttagaggtttgttgataaacgatgacatttgatttctgcttcttctc  10870600
                                                           <---------ICU4
                                                          --------->AHL20(2)
                                                          <---------AHL20(2)
                               <---------AHL20(2)        <---------WOX13(1)
                               --------->AHL20(2)      --------->ATHB12
                     --------->AHL20(1)              <---------WOX13(1)
                     <---------AHL20(1)             <------------CBF
                     <---------AHL20(2)           <---------AHL20(1)               --------->DAG2
                     --------->AHL20(2)           <---------AHL20(2)              ---------->DOF2
                    <---------ATHB12         ------------>CBF <---------AHL20(2)<---------AHL20(2)
                ------------>CBF<---------AHL20(2)--------->AHL20(1)       <---------YAB1
                <---------YAB1 <---------AHL20(1) --------->AHL20(2)  <---------ICU4----------->GT1
    --------------->AGL15 ------------>CBF ------>ZmHOX2a(1)  <-----------GT1  --------->AHL20(2)
 --------->ANAC46   --------->AHL20(2) <-----------GT1<---------AHL20(2) <-----------GT1
 
ttcttcgccactaagagttatcaataaatttcaatttttttgtttcctctcaattaattgattaattacttcttaattactattaaaaagtgaaattttc  10870700
                        --------->AHL20(2)
                        <---------AHL20(2)
                    <---------AHL20(2)                                                   ------>ZmHOX2a(2)
                --------->AHL20(2)                                                     <---------ARR14(2)
                <---------AHL20(2)                                                     --------->ARR14(2)
               <---------AHL20(1)                                            --------->AHL20(2)
               --------->AHL20(2)                                            <--------ATHB1
               <---------AHL20(2)                                            <---------AHL20(2)
            --------->YAB1                                                   <---------ICU4
            --------->AHL20(2)                                               <---------AHL20(1)
            <---------ICU4                                                  <---------YAB1     xxxxx
            --------->ATHB51                                                --------->ICU4     <----
            <---------AHL20(1)      --------->ANAC55(2)                --------->YAB1  --------->ARR11(3)
            <--------ATHB1         <---------TOE2(3)                   --------->ANAC55(2)    ------
           --------->ICU4        <---------AHL20(2)                    --------->ANAC46<---------ARR11(3)
           <---------ATHB51  <---------AHL20(2)            <---------AHL20(2)--------->YAB1  <------
           <---------ATHB12 --------->AHL20(2)        --------->At5g28300 --------->YAB1<------ZmHOX2a(2)
<---------AHL20(2)  --------->AHL20(2)               ----------->GT1  <-------TEIL <---------LBD16 -
 
taattcatttaccaataatttttttaatttataaaatttatgtaatcaaatccaaatggtaaataatctcatatacataataattttggggatcttatta  10870800
                                              <-----------HVH21
                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                            ------->PIF5
                                            <-------MYC4
                                            ------->MYC4
                                            <-------PIF5
                                            ------->MYC2
                                            <-------MYC2
                                            ------->MYC3
                                            <-------MYC3 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                           --------->O2  <xxxxxxxxxxxxxxxxsmallRNA(i)
                                           <<<<<<<<<<ABI5<xxxxxxxxxxxxxxxxsmallRNA(s)
                                           <<<<<<<<<<AtMYC2
                                           <<<<<<<<<<HY5 xxxxxxxxxxxxxxxx>smallRNA(i)
                                           <--------ABF1 xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                           <---------O2 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                           --------->TGA1a<xxxxxxxxxxxxxxxxsmallRNA(i)
                                           <---------ANAC55(2)
                                           --------->ANAC55(2)
                                           --------->bZIP60(2)
                                           <---------TGA1axxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                          <<<<<<<<<<<<AtMYC2
                                         <---------ALFIN1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                     xxxxxxxxxxxxxxxx>smallRNA(s)
                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                    xxxxxxxxxxxxxxxxx>smallRNA(le3)
                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                    xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                    xxxxxxxxxxxxxxxx>smallRNA(le3)
                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                   xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                   xxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                   xxxxxxxxxxxxxxxx>smallRNA(i)
                                   xxxxxxxxxxxxxxxx>smallRNA(s)
                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                  xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                  xxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                  xxxxxxxxxxxxxxxx>smallRNA(s)
                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                  <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                  >>>>>>>>>ARR2         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                  >>>>>>>>>ARR1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                                  >>>>>>>>>ARR1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                  >>>>>>>>>ARR2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                 xxxxxxxxxxxxxxxx>smallRNA(s)
                                 xxxxxxxxxxxxxxxx>smallRNA(i)
                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                 ==================================HOX2a_HOX2a
                                 <------ZmHOX2a(1)      <xxxxxxxxxxxxxxxxsmallRNA(i)
                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                 xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                xxxxxxxxxxxxxxxx>smallRNA(s)
                                xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                               xxxxxxxxxxxxxxxx>smallRNA(s)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                               xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->YAB1
                               xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                               xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                               <---------TOE1(2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)
                               <---------TOE2(2)   <xxxxxxxxxxxxxxxxsmallRNA(i) --------->AtLEC2
                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       <-------MYC3
                              xxxxxxxxxxxxxxxxxxx>smallRNA(le3)           ------->MYC3
                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)      xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)
                              xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxx>smallRNA(i)
                              xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                             xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    xxxxxxxxxxxxxxxxx>smallRNA(le3)
                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                             xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                            xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                          xxxxxxxxxxxxxxxx>smallRNA(s)  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                          xxxxxxxxxxxxxxxx>smallRNA(i)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxx>smallRNA(si3)
                         <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxsmallRNA(i)
                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------ZmHOX2a(2)  --------->WOX13(1)
                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(i)
                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                         xxxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxsmallRNA(i)
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                        xxxxxxxxxxxxxxxx>smallRNA(s)<---------ATHB12  xxxxxxxxxxxxxxxxx>smallRNA(si3)
                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                        xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                        xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxx>smallRNA(i)
                        xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<-----------HVH21 xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)
                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxsmallRNA(i)
                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
    --------->AHL20(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
    --------->ARR11(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxx>smallRNA(le3)  <---------
   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<-----------HVH21
   --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <--
xxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
-----AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <------
--->AHL20(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<------
---YAB1         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <----------
-------->AHL20(2)<---------ICU4xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
 
tataaaatatatggttttcaaaattgctaactcataggattgtgccacgtgtcaaatcaaacgatcagatgtttacatgtgtcattcaaaatttaacttt  10870900
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AGI:  At4g20090.1   
Description:  EMB1025 (EMBRYO DEFECTIVE 1025). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G64320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41926.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 10868410    to: 10870392    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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