Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ICU4                           -------->ATHB1                           --------->ATHB51                          --------->AHL20(2)                       <---------AHL20(2)                       --------->AHL20(2)                      <---------AHL20(1)                      --------->AHL20(1)                 --------->AHL20(1)                 <---------AHL20(2)                        <-----------ARR10                 --------->AHL20(2)                        <---------ARR14(2)          --------->ANAC58--------->ICU4  ----------->RAV1(2)           <---------AHL20(2)          --------->ANAC55(1)          <---------At4g35610 --------->GLK1(2)          --------->O2<---------AHL20(2)  <---------At4g35610          --------->AHL20(2)          ----------->GT1 --------->AHL20(1)   --------->At4g35610 ----------->GT1          --------->ANAC58<---------YAB1  --------->At4g35610    --------->ZAT14          --------->ANAC55(2)   <---------ANAC46           <---------ARR11(3)          <---------ANAC46<---------AHL20(2)   <---------ANAC46  <---------ZAT18     --------->YAB1   --------->AHL20(2)  --------->ZAT2   --------->ARR14(2)<-----------GT1 ---ATHB12<---------ANAC55(2) <-----------GT1  ----------->GT1   <---------ZAT14                   <-   tcttctatagtcacgtaaataaaataaaattattacctgtaatctgctgaggtgaaaccagtatctgtgcagataaaattcacatttctcatccaatgct  10796300                                                                                        <---------HSFB2a(2)                                                                                        --------->HSFB2a(2)                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                              --------->O2                               <---------WRKY12              ===========================MYC_MYB                               <---------WRKY45              -------->P       <---------O2                              --------->DOF5.7(2)        <---------ARR11(1)   --------->ANAC46                ---------->DOF2<---------WRKY38(1)       --------->ARR14(2)   <---------TGA1a             ----------->RAV1(2)<---------DOF5.7(2)      <---------ARR14(2)   --------->TGA1a -----NtERF2------>ZmHOX2a(2)--------->TOE2(3)           <-----------ARR10  <-----------GT1   cggcaaatggatgatccctgaagccctgaatcgtcaacgtttccaaaaaactctctccaaatctaccattgaacatattcacgtcgtcttctgaaaccct  10796400                                                           <---------ANAC46                                                   <---------ALFIN1                                                  ------>ZmHOX2a(1)                                                ------>ZmHOX2a(2)                                              <---------ARR14(2)                                              --------->ARR14(2)                                              --------->ARR11(3)                          <----------                                              --------->AGP1 --------->AtLEC2         ------->TEIL                                              <---------GLK1(2)                     --------->REM1(2)                                              <---------ARR11(3)   --------->ANAC46 --------->ZAT14                                         --------->YAB1    <---------ANAC58         <---------ZAT14                                        =================HOX2a_HOX2a       ----------->HVH21                                        <------ZmHOX2a(2)  <---------ANAC58----------->TGA1 <--------           <------ZmHOX2a(2)     --------->SPL7<------ZmHOX2a(2)   --------->YAB1<---------ANAC46   atagaagacagggatcaacacgagttttccttccctacgtcgatcatagatcctcaccgcttcgtgcaaacacaactctgacgctgtgtaccggtcagag  10796500                                                                                          <----------                                                                                       --------->DOF5.7(2)                                                           ------>ZmHOX2a(1)          --------->TOE1(3)      ---------->DOF2        ------>ZmHOX2a(2) <---------ANAC58    --------->ANAC58   --------->TOE2(3) -HVH21                      =====================================HOX2a_HOX2a   --------->YAB1    <-- -WRKY12   ----------->RAV1(1)                 <---------ANAC58    --------->ANAC58  ----------->GT1   aaaatcactaatgcgacatttgagttatcgatcgctctgaaaatgtgttccatgcctcttcctcttcgctcgtcactatctatgaaaacgttaaaccctt  10796600                                                                                     <---------CCA1(2)                                                                                 <---------ANAC58                              ------->TEIL                   --------->YAB1      <---------ANAC46                   <-------MYC2              =====================================HOX2a_HOX2a                   <-------MYC3          ----------->HVH21 <---------WOX13(1) ------->PIF5                   ------->MYC3   <-----------HVH21      --------->ATHB12     <-------PIF5            <----------DOF2   --------->ARR14(2)        <---------YAB1       <---------ANAC58      <---------TOE2(3)       <---------ARR14(2)<----------DOF2              <---------ANAC58 -GT1 <---------TOE1(3)    <---------ATHB12  ------>ZmHOX2a(2)     --------->ZAT6<---------ANAC58 ---------TGA1     ------->MYC2  --------->ANAC46       --------->ICU4     <------ZmHOX2a(1)   cgtcatttaaggctctttccacatgcctaatgaatccgtcgctctgatcgctttcaccatgattgataaacactagaggacgtgcttgtatcgccattgg  10796700                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                               ------                                                                                          <---------ATHB12                                                                                        --------->WOX13(1)                       --------->GLK1(2)                   --------->REM1(1)          ------------>CBF        <------------CBF                                   --------->ANAC46           <------ZmHOX2a(2)      <---------YAB1------------>CBF         <----------DOF2                         <---------ARR11(3)   attagggtcttattgttttcgaaacaatctatttgtcaaactactctctttttaagaaactacaccagttttcaaaatttccaactagatcaatctttca  10796800 <---------ICU4 ------>ATHB51                             <---------TOE1(3)                                      --- ------HAHB4          ------->TEIL         <---------TOE2(3)                                 <------- -------ICU4          <-------TEIL        --------->MYB52(1)                                --------- ----->ICU4        --------->AtLEC2<---------HSFB2a(2)                   ---------->DOF2    <-------- ------YAB1       --------------->AtSPL8<---------MYB52(2)    --------->YAB1              --------->YAB1 --->YAB1     <-----------GT1      --------->HSFB2a(2)       --------->AHL20(2)          <------ZmHOX2a(2)   taattaagacaacgtttttccatgtacattttttcttctaaaactaacgtttcagttttccaaataaaaatcaaacaaagtctaaaaatcgatcataatt  10796900                                          --------->YAB1     <---------AHL20(2)                 <---------YAB1                                              < <---------AHL20(2)                    --------->TOE2(3)                     <----------DOF2   <----- --------->AHL20(2)  <------------CBF --------->ATHB12                <---------ANAC58         <----- -------->GT1     ----------->TBP     --------->YAB1                  <---------ANAC58         ------ --ICU4      --------->MYB52(2)       <---------ICU4           <-----------GT1                 ------ >ICU4     <---------MYB52(1)        --------->ICU4           --------->AHL20(2)               ------ -YAB1  <---------TOE2(3)            <---------ATHB12         <---------AHL20(2)<------------CBF    <   tagttaaataaacgtttgctacaaattgccaaatgaaaaatcattaatagtttaatacacatatttaactaggcttgggcttaattgtgtcccttaaaat  10797000                                                                                              -------                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                      --------->SPL7      <---------ANAC58                                                                <---------ZAT18      <---------ANAC58                                                            --------->ANAC46 ---------ANAC58                        --------->AtMYB61                         --------------->AtSPL3 ----ARR11(3)                       --------->ETT(2)                        ========================= ----ARR14(2)                       <---------ETT(2)                        --------------->AGL15 --->ARR14(2)             <---------ANAC58                          <----------DOF2 <---------SPL7 --->GLK1(2)              --------->ANAC55(2)         --------->ARR14(2)    <---------------AGL15 --->ARR11(3)             <---------ANAC58            <---------ARR14(2) <-----------GT1      ------- ---------ANAC58        --------->MYB52(1) <---------ALFIN1     <-----------GT1 <-----------GT1     <   ctgcttgggcttgtgtccctcaaaacttacgggctctgtctacctccactcccaagtatttgctaaaaaccttttatacttcttacggtacgctaacctt  10797100                                           <---------KAN4(1)                                           --------->KAN4(1)                                           <---------HSFB2a(1)                                  <---------YAB1                                <---------------AGL15                                --------------->AGL15                                ------>ZmHOX2a(1)                           --------->KAN4(2)--------->KAN4(2)                          --------->HSFB2a(1)      ------>ZmHOX2a(1)                         <---------TOE1(2) --------->HSFB2a(1)   <-----------GT1 --------->ARR14(2)      --------->HSFC1(2)  --------->AtLEC2 -->TOE1(3)------>ZmHOX2a(1)   <-----------------AGL3        <---------ANAC58 ================================================MADS_MADS   <---------ANAC46     --------->DAG2 -->TOE2(3)--------------------->WRI1      <---------HSFC1(2)<---------ANAC58   ---------->DOF2    -- ---------ICU4     <---------ARR14(2)     <---------KAN4(2)<-----------HVH21  --------->YAB1       ==   aatattcactctccttcgtaatattcgcacattcctatgaatggaacgttctcctcaagactgtcgtgcaagtgaaacattcaaaaggcagttttttgtg  10797200  Previous    Next  AGI:  At4g19910.1    Description:  Toll-Interleukin-Resistance (TIR) domain-containing protein. similar to disease resistance protein (TIR class), putative [Arabidopsis thaliana] (TAIR:AT4G19920.1); similar to unknown [Arabidopsis lyrata] (GB:AAO42473.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 10795879    to: 10796697    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version