Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->DAG2                 --------->ANAC55(2)                            <---------ZAT18   ------------------------>ANAC81<---------ANAC55(2)         <-------TEIL    <----------DOF2     ---------->DOF2       ----------->GT1 --------->HVH21   <-----------GT1      ------------------------>ANAC81  --------->YAB1   tatgaccgaggtacatgtttttaactgctttgcacttgaaaataccaaaaagcctaaaacaaaaacaaattgtattaatacttaacaatttttgaagtat  10794400                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                        <---------AHL20(2)                                                                     <---------AHL20(2)                              ---------->DOF2          ------->TEIL  --------->AHL20(2)                 <-----------GT1                 ------->TEIL        --------->AHL20(1)  --------->ARR14(2)    --------->AHL20(2)  --------->CCA1(2)        <---------AHL20(1)<---------AHL20(2)  --------->ARR11(3)  --------->ANAC58     --------->ARR11(3)     --------->YAB1  --------->AHL20(2)  <---------ARR14(2)  --------->ANAC58     <---------ARR11(3)  <----------DOF2  --------->TOE2(3)   agcatatattgtcagatttataccaagtaaatgaaagaggcataagatatgtatatgtatatttgctttaatattttaaaaacattaaataaatcgtatt  10794500                                                                              <---------AHL20(2)                                                                              <---------AHL20(1)                                                                              --------->AHL20(2)                                                                              --------->AHL20(1)                                                                           --------->YAB1                                                                          <---------ATHB12                                                                          <---------ATHB51                                                              <---------AHL20(2)                                               --------->AHL20(2)   ----------->GT1          <---------ANAC46                  --------->TOE2(3) <---------AHL20(1)   --------->ATHB12         <---------LBD16                   <---------ICU4     --------->AHL20(2)   <---------ICU4     <-----------RAV1(1)               --------->AHL20(2)     --------->AHL20(1)  --------->ICU4   gaatgttttgttgggggaaaacgtttttatggcattagacattaaacattaaaacaaattgcaataaaataggtcaataataaaatgatttcttctaggg  10794600                --------->AtLEC2                --------->ICU4           --------->ANAC58         ------->TEIL           --------->ANAC58      --------->ANAC58                                                 ---           --------->ANAC46      --------->ANAC58                   <-----------GT1             -----         --------->LBD16         --------->ANAC46               <---------AHL20(2)             <----- --------->AHL20(2)   ---------->DOF2         ---------->DOF2  --------->AHL20(2)              ------   tcataaatttccccagccatgcttaaaagtaatagacgcatcgttttcgaaagctaagttttgaattttataacataactaattcaatgtaatacaagat  10794700            ----------->RAV1(2)       <----------DOF2                                                          --------->YAB1      -     ------->TEIL                                                          ------------>CBF <--------  --------->ANAC46                                                 <---------bZIP60(2)     --------->TOE1(3) ------>CCA1(2)             --------->AtLEC2                       <---------ANAC58        --------->TOE2(3) ---->CCA1(2)         --------->MYB46(3)                           <---------ANAC58       ----------- ----ARR11(3)--------->TOE2(2)  --------->At4g35610                <---------ANAC46       <---------ANAC46 --->ARR11(3)--------->TOE1(2)  <---------At4g35610             ----------->HVH21         <---------ANAC55(2)   atatacgaacttttacctgagagaacaaacatgcagatgaacagataagaacacagtagttttgccatgacttgggaatcaataagaagattacgttaat  10794800                                                                            <---------TGA1a                                                                            <---------ANAC46                                                                            =========================                                                            <---------AHL20(2)                                                          <-----------TBP   <---------bZIP60(1)   <------------CBF                                 ==================================bZIP_DOF ----------->CBF        <----------DOF2             ---------->DOF2         --------->bZIP60(1)    <- -MYB52(1)    ----------->GT1    ---------->DOF2---------->DOF2      <---------YAB1                <- >GT1    --------->MYB52(2)  <------------CBF   ======================================bZIP_DOF    <--   ctaacaattgtttgtttcgaaaaattctttacattgaaagatgagatgggaaaagaaagtatttatagattataagtgatgtgagaaacatagaagaaat  10794900                                                 <---------YAB1           <--------HAHB4                                                <---------AHL20(2)        <---------ICU4                                            <---------ICU4                --------->ATHB12                                            --------->YAB1                --------->ATHB51                                            -------->ATHB1                --------->YAB1                                           --------->ICU4                 <--------ATHB1       ------                                           <---------YAB1                 -------->HAHB4       ------                  <---------AHL20(2)       <---------AHL20(2)            --------->AHL20(2)   -------          ----------->RAV1(1)              --------->AHL20(1)            <---------ATHB51 <---------WRKY18(1)   <----------DOF2--------->AHL20(2)       --------->AHL20(2)            <---------YAB1  --------->WRKY38(1) =============bZIP_DOF                  --------->ICU4                   --------->ICU4  --------->WRKY12 ----------------AGL1              ----------->GT1                     --------->YAB1    --------->WRKY45 ----------------AG       ----------->GT1<---------ICU4               <---------YAB1    --------->DOF5.7(2) ---------GT1<---------ARR11(3)---------->DOF2<---------YAB1        --------->YAB1   ------->TEIL   atactcttttggcaacatatttaaactaatgtgaaaagagtcaaaattattattttggcaaaaacatttctcataataattagtttgaacgttgaccaac  10795000                                                     <---------AHL20(2)                                                    --------->AHL20(2)<---------WRKY45                                                <---------AHL20(2)    <---------WRKY38(1)                                          <---------AHL20(2)          <---------WRKY12                                 --------->ZAT6--------->YAB1        <<<<<<<<<<WRKY6                               <-----------GT1<---------AHL20(2)     --------->WRKY18(1)                            ----------->GT1  --------->AHL20(2)      <<<<<<<<<<WRKY11  ----------->GT1         ---------->DOF2 <-----------TBP    <------MYB83 >MYB83            --------->GLK1(1)    --------->AHL20(2)   <------MYB46(1)               <-------TEIL >MYB46(1)  ---------->DOF2--------->DAG2 --------->AHL20(2)--------->MYB59  --------->AHL20(2) ---->RAV1(1)      <---------GLK1(1)    <-----------TBP <---------AHL20(2)   <---------AHL20(2)   aaaatggaaaaaaaaaaagagatttctgaaaagtaacaccatatatatataatattaaatatttggtaatggtcaacatataatttctatgcattcattt  10795100                                     <---------ICU4                                     --------->ATHB51                                     --------->YAB1                                    <---------ATHB12                                 <---------------AGL15                                 --------------->AGL15                                ----------------->AGL2                                <-----------------AGL3                                ----------------->AGL1                                             --                                ----------------->AGL3                                             <-                                ----------------->AG                                              ---                                <-----------------AGL1                                           <---                         <-----------GT1                                                       ------                      <---------ICU4--------->ICU4                                             <-----                     --------->AHL20(2)                         --------->AHL20(2)            <------                     <---------AHL20(2)                        --------->AHL20(1)             -------                     <---------YAB1 <---------ATHB51           <---------AHL20(1)             <------                    <---------AHL20(1)            ---------->DOF2<---------ICU4               -------                    --------->AHL20(2)       <----------ID1    --------->ARR11(3)          --------->AHL20(1)                    --------->AHL20(1)    ---------->DOF2      <---------ARR11(3)          --------->AHL20(2)              ----------->GT1   <-----------------AG--------->DAG2         --------->AHL20(2) -------              --------->YAB1    <-----------------AGL2<----------ID1<-----------GT1        <---------AHL20(2)  ----------->GT1   <---------AHL20(2) <---------TOE2(3)      --------->YAB1              --------->AHL20(2)   tctatggaaaattgtatagtaatataattactcatccaattatggaaagaacaaaagggaccaaaaatatttacaaattaaaaccattacaaaaaaatta  10795200       --------->YAB1       <---------ICU4       --------->ATHB12      <---------ATHB12      --------->ICU4                           --------->AHL20(2)  --------->AHL20(2)                           <---------AHL20(2)              <-----------GT1 ------->AHL20(2)                             <---------AHL20(2)              <---------ZAT14 --------AHL20(2)                             --------->AHL20(2)              --------->ZAT14   <---- ------>AHL20(2)                       <---------ZAT18              --------->AHL20(2)          ----- ------YAB1                            --------->ZAT14              <---------AHL20(2)       <------- -->ATHB1                            --------------->AtSPL8         <---------YAB1           -------- ----ICU4              <-------TEIL  <---------------AtSPL8        --------->AHL20(2)       --------- ---YAB1  --------->AHL20(2)       <---------ICU4                  --------->AHL20(1)       <-------- -->AHL20(2)          --------->ARR14(1)      <---------AHL20(1)   <---------AHL20(1)       --------- ---AHL20(2)         --------->ARR11(1)--------->ZAT18            --------->YAB1            <-------- -->ICU4--------->TOE2(3)       --------->YAB1--------->YAB1  --------->AHL20(2)      --------->AHL20(2) -->AHL20(1)         <---------GLK1(2) <---------ZAT14        <---------AHL20(2)      <---------AHL20(2)   ttaaaaaaatcattaaacatatagattcgatgtataataagtgtacaataaaattagaaagaatttaaatataatttcagtttactatttaaaatttaat  10795300  Previous    Next  AGI:  At4g19905.1    Description:  LCR38 (Low-molecular-weight cysteine-rich 38). Identical to Putative low-molecular-weight cysteine-rich protein LCR38 precursor (LCR38) [Arabidopsis Thaliana] (GB:P82753); similar to LCR24 (Low-molecular-weight cysteine-rich 24) [Arabidopsis thaliana] (TAIR:AT4G29285.1) Range:  from: 10794175    to: 10794768    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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