Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------MYB46(3)  <------MYB46(1)             --------->TOE2(3)    <---------YAB1  <------MYB83     <-------TEIL                 --------->ICU4      ------->TEIL -------MYB46(3)  --------->CCA1(2)             <---------YAB1   --------->ANAC58     <---------ANAC58 ---------RAV1(1)--------->ARR11(1)     ------->GAMYB            --------->ANAC58     <---------ANAC58 ---GAMYB        --------->ARR14(2)    --------->MYB46(3)   --------->ANAC58      --------->LBD16 ------RAV1(1)   <---------ARR14(2)    ----------->HVH21    --------->ANAC58    <---------LBD16 ->HVH21  ------->TEIL    <---------WRKY12<---------DEAR3(1)--------->ANAC46  <-----------GT1   ttgttggttttgaatctgagatacgagttcaacgtttatcaacgacggtgatgatgagtcaaacgctacggacctccgtttaaccggagcgtttgagtct  10714300                       <---------ANAC46                  <---------ANAC58                                                              -----                  <---------ANAC58                                                              -----                 <------NtERF2                                                               --------                ------>NtERF2                                                                <-------        <---------ARR11(3)               ----------->GT1                                     --------        --------->ARR11(3)           <------ZmHOX2a(1)                                       <-------        --------->GLK1(2) <---------ETT(2)                             <----------DOF2<----------DOF2        <-----------ARR10 --------->ETT(2)                      <----------DOF2      <---------ANAC58   ----------->GT1<---------ANAC46<------ZmHOX2a(1)             <---------DAG2       <---------ANAC58   gagaattgaaaatctcgctggcgttttgtagacagaggaggaacagtgaaattgtaactgagaccactttctgctttgttgaagttggctttcgcagcta  10714400                             <-----------GT1                             --------->MYB52(1)                --------->GLK1(2)             --------->LBD16               <---------ARR11(3)            --------->ATERF1(2)    --------->MYB52(1)     <---------YAB1   <---------LBD16   <---------WRKY38(1) <---------MYB52(1)  ------>NtERF2   ---------->CDC5    ----------->GT1      --------->ABI4(1)   <---------WRKY12   --------->LBD16     --------->DEAR3(1)         <-------TEIL ----->DOF2    <---------GLK1(2)------->GAMYB<---------ATERF1(2)  <---------MYB46(3) ---->MYB52(1) <---------ARR14(2)        --------->MYB46(3)      --------->ALFIN1 ->ZAT2        --------->ARR14(2) --------->ARR14(2)           <---------ANAC46 --At4g35610   --------->ARR11(3) <---------ARR14(2)           --------->DEAR3(1)         --------->ZAT6 ->At4g35610 ----------->ARR10 --------->ANAC46  --------->ZAT14--------->LBD16         <-----------GT1 --ZAT2------->GAMYB<---------LBD16     <---------At5g28300 --------->ANAC46          --------->AHL20(2)   aaggctcaacggcgaaagattctccggttattaacggaacttcaccgccggtaaactcaaactcgccgtggttcatgttttcttgaaatttaacacaatc  10714500                                                                                            <------MYB83                                                                                            ---------                                                                                            <------MYB46(1)                                                                                           <---------MYB46(3)                                                                                           --------->MYB46(2)                  ---------->DOF2                                                  <-----------GT1               --------->AHL20(2)                                              <---------RVE1(1)              --------->AHL20(2)  --------->AHL20(2)                          <---------ARR11(3)            --------->YAB1   <------ZmHOX2a(1)                                --------->ARR11(3)    <---------MYB52(2)      ----------->GT1  <------ZmHOX2a(1)        <---------AHL20(2) <---------MYB52(1)   tctgcaaataacaaaaataaaaaagattagaggaaaataaaaacagaggaagtttgtttgtgagaagaatataaaaatgagatttttacctgtttggtga  10714600                                                                   --------->GLK1(2)                                                             --------->HSFB2a(2)                                                             <---------HSFB2a(2)                                                      --------->DAG2                                             <---------MYB46(3)   <---------GLK1(2)                    --------->ANAC55(2)   <-----------RAV1(1)------>ZmHOX2a(1)                      - -->GT1          <-------TEIL      --------->MYB46(3)---------->DOF2        ---------->DOF2      <---   tataaactgagagaaaatgttcatgtgatgagcttgaacagccattgttgttgaaaaaagctcctagagattctgaaacaaagagagagagaagagggag  10714700                                                                                 --------->AHL20(2)                                                                                 ----------->TBP<----                                                                   <---------AHL20(2)        <-------                                                                <---------AHL20(1)           <-------       <xxxxxxxxxxxxxxxxsmallRNA(i)                             --------->AHL20(1)     --------->ANAC55(2)       ------>NtERF2               <----------DOF2         ------------>CBF    <---------HSFB2a(2)      <---------RAP2.6(2)         <---------ANAC58       ----------->GT1       --------->HSFB2a(2)      <---------ANAC46            <---------ANAC58      --------->DAG2 <---------AHL20(2)   --------- --------->ALFIN1            <------------CBF          ---------->DOF2 --------->AHL20(2)   --------- -------->ALFIN1   --------->GLK1(1)        <---------TOE2(3)   <---------ARR11(3)     <---------ANAC55(2) ---ZmHOX2a(1)   *TSS        --------->ARR14(2)   ----------->GT1  --------->AHL20(2) <-------TEIL <-   gagttgtggcgactggtgaagaaatctatgggattggcttttatttaagggagagaaaaaagtcaatatttttttaattttctataaatacatatttatt  10714800                                     <---------YAB1                                   <---------ICU4                                   --------->YAB1                                  --------->ICU4                      <---------RVE1(1)                      <---------CCA1(1)                     <---------ARR11(3)                     --------->ARR11(3)  <-----------GT1   <<<<<<<<<RAP2.2-------->HAHB4 -------GT1   --------->AHL20(1)--------->YAB1                                               -------- --ICU4  <---------AHL20(2)    --------->AHL20(2)                                           <-------- --AHL20(2)   <---------AHL20(1)<--------HAHB4                --------->YAB1          ----------->GT1 >AHL20(2)   <---------AHL20(2)--------->ICU4              <----------DOF2       <---------ANAC46 >ICU4   --------->AHL20(2)  --------->YAB1        --------->ARR11(3)     ----------------->AG<------ ---------DOF2--------->AHL20(2)<---------ICU4     <---------ARR11(3)   <-----------GT1     ---------   acttttactatttaaatattttagatatttagaataattatgaattcaaattagatattgactttcatggtatattaccaattgtgtttagtaattaaag  10714900         <---------AHL20(2)                                                ------->TEIL        <---------AHL20(2)                                           <---------AHL20(2) ----------->GT1                                     ---------->DOF2--------->AHL20(2)   <---------AHL20(2) -->DOF2--------->AHL20(2)                       <----------ID1--------->MYB46(3)       --------->AHL20(2) -AHL20(2)                                 <----------ID1     --------->ANAC58          --------->AHL20(1) ---TOE2(3)                <---------At4g35610 ---------->DOF2--------->ANAC58          <---------AHL20(1) >AHL20(2)      ----------->GT1         ---------->DOF2     --------->MYB46(3)  ---------->DOF2   tttttgtaaattaaatgttagtaaaatacagttgatttttgtaaaaggaaaaagaaaaagaaacaaccaattttatgaacttaaaaggaatataatctag  10715000                                                                       ----------->GT1                                                                     --------->TGA1a                                                                     <---------O2                                                                     ================================                                                                     <---------ANAC46                                                                     <---------ANAC58                                              <---------ANAC58       <---------bZIP60(2)                                              <---------ANAC58       <---------TGA1a                                           <----------DOF2           <---------ANAC58                                           ====================================bZIP_DOF                                        --------->ARR11(3)  --------->ICU4                     <---------YAB1 <-----------GT1         <---------ARR14(2)          --------->AHL20(1)     <---------AHL20(1)       --------------->AGL15                     <     --------->AHL20(2)          <---------ARR11(3)      <-----------------AGL3               -------   agaaatataaaatatactaagtttttattcaacaatatatactatctttcttgaagtttgcaaatattgggacgtgtaaaaagttttttttttgtaatat  10715100                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                        <---------AHL20(2)                                  ------>ZmHOX2a(1)                                 --------->YAB1         --------->ATHB12<---------AtLEC2                                 ---------->DOF2      <-----         <---------AHL20(2)      --------->TOE1(3)                       <---------WRKY45      ------ ==========bZIP_DOF <---------ATHB12                         --------->ANAC58      --------->ICU4   - ----------DOF2 <---------ZAT18  --------->TOE2(3)           --------->ANAC58      <---------YAB1   < -->ICU4<---------AHL20(2)------->TEIL         --------->ANAC46   <---------WRKY18(1)  --------->AHL20(2)   ttctttcttatttattgatgcactcatgcatgtttccttagcaacatccacataaacatatgcaagcttgactagtcaaagagccattataaaatcaata  10715200  Previous    Next  AGI:  At4g19700.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G45100.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83796.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066) Range:  from: 10713571    to: 10714717    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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