Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------AHL20(2)--------->ANAC55(2)                      --------->TOE1(3)            --------->AHL20(2)--------->ANAC58                      --------->TOE2(3)           --------->AHL20(2) --------->ANAC46         <------             --------->AHL20(2)         <----------DOF2              --------->ANAC58       ---------          --------->TOE2(3)            <---------DAG2         <---------TOE1(2)   ----------->GT1   aatgcattcaaacgataatataaaccttaattccaatatagcctttttcaaatttaaaaactcgaatgtttacgaaactataacttgataaaactgattg  10707000                         <---------AHL20(1)                         --------->AHL20(1)                         --------->AHL20(2)                         <---------AHL20(2)                 --------->AHL20(2)    --------------->AtSPL8                       --------->AHL20(2)    <---------------AtSPL3                       --------->AHL20(1)    <---------------AtSPL8                       <---------AHL20(2)    <---------AHL20(2) --------->AHL20(1)   --------->YAB1        --------->AHL20(2)       --------->TOE2(3) <---------AHL20(2)  <---------AHL20(2)     <---------AHL20(2)       --------->ANAC55(2) --------->AHL20(2) --------->AHL20(2)  <---------AHL20(2)   --------->AHL20(2)      --------->YAB1 ---WOX13(1)     <---------AHL20(2)     --------->AHL20(2)<----------DOF2  <---------AHL20(2) >ATHB12------->TEIL<---------AHL20(2)  --------->AHL20(1)--------->TOE2(3)--------->AHL20(2)   aaataaaatgtacttacatttttttaataaaatatacttaaattttttaaataaaatatactttaaaatatacttaattttttaaaatcatactatggat  10707100                                                                           <---------AHL20(2)                                                                        --------->YAB1                                                                       <---------YAB1                                                                       <---------AHL20(2)                                                                      --------->AHL20(1)                                                                      --------->AHL20(2)                                                                      <---------AHL20(1)              <-----------HVH21                              <---------------AtSPL8         <---------AHL20(2)                                  --------------->AtSPL8         --------->AHL20(1)                                 <---------WOX13(1)                  <----         --------->AHL20(2)                 <---------ARR11(3)----------->GT1                   -----         <---------AHL20(1)                 --------->ARR11(3)<------MYB83 --------->AHL20(2)   -----        --------->AHL20(2)              ---------->DOF2   --------->ATHB12 --------->YAB1       <----        <---------AHL20(2)      <----------DOF2<----------DOF2<------MYB46(1)         --------->AHL20(2)   tttaaacaaaataaattgtcactgagtcatatttctttggataaaagaactttacataagtgattggtacaatataataatatgcaaatttaagacattt  10707200                                                            <----------DOF2                                                          <-------TEIL      <---------YAB1                                                       <------MYB83       <---------ICU4                                                       <------MYB46(1)    --------->YAB1                                                      --------->MYB59     <--------HAHB4             <---------TOE2(3)                        --------------->AtSPL8--------->ICU4          <---------AHL20(2)                       --------->STY1(2)     <---------ATHB12         <--  <---------TOE2(3)                                <---------STY1(2)     <---------YAB1        <----- -----AHL20(2)           ------->TEIL         --------->ARR11(3)  <---------ICU4              <------ ---->AHL20(1)         <-------TEIL           --------->GLK1(2)  <---------YAB1    <----------DOF2<-- ---->AHL20(2)    <---------AHL20(2)       <---------AHL20(2)    --------->ICU4<-----------GT1------- -----AHL20(1)    --------->AHL20(2)       --------->AHL20(2)  --------->YAB1<---------ICU4----------   tattaagtttatattatcgtttaaatgcattttctatcaacttaataaaatctagctaggtactttcataattctatcattattccttttgaacgattaa  10707300                                                                                        <---------ALFIN1                                                        --------->ICU4                 --------->ZAT2 <---------DAG2                                         <---------YAB1                 --------->At4g35610 <----------DOF2                             <---------AHL20(2)                     --------->MYB46(3) ---------GT1                               --------->AHL20(2)           <---------ANAC58 ----ICU4<-----------GT1                    <---------AHL20(1)           <---------ANAC58 ---AHL20(2)                 --------->MYB52(1)     <-----------TGA1     <---------ANAC46<---------ZAT18 -------AHL20(2)         --------->ANAC58   --------->AHL20(1)     <---------AHL20(2)------->GAMYB -->AHL20(2)      --------->ZAT6       --------->AHL20(2)         ----------->TBP  -------->P ->GT1 <-----------GT1   --------->ANAC58   <---------AHL20(2)------------>CBF   --------->MYB46(3) -   ttactttattttctcgtttcacactggaagcaaacgagtaatcaaataaaatttcgtcatcatcgacaataaatggcatgaaaacaaccagcacacatta  10707400                                                         --------->ANAC58                                            <-----------GT1                   ----------->GT1                                          --------->AHL20(2)  --------->MYB46(3)                                    *TSS--------->TOE2(3)--------->ANAC58     <----------ID1           <-------TEIL          --------->ANAC58        --------->ANAC46   ---------->DOF2    <-----------GT1              --------->ANAC58 --------->TOE2(3)    ----------->GT1 ---------->TBP              <-----------HVH21    >>>>>>>>>RAP2.2    ---------->DOF2      --------->AHL20(2)   ctatataaaccgattcatctagtaagtccaaagtcacacaaacattaaacaatctaaacacacaacaatccaaaagaaaaaagaaaaaaaaaaaaaatgg  10707500                                                                                      <------NtERF2                                                                                  ------>NtERF2                                                                                  <---------RAP2.3(1)                                                                                 <---------DEAR3(1)                                                                                --------->ZAT18                                                                               ------->GAMYB                                                                             <---------At4g35610                                                                             --------->At4g35610                                                ---------->ID1               ----------->RAV1(2)                                  --------->TOE1(1)                --------->ANAC58  --------->LBD16                                  --------->TOE2(1)                --------->ANAC58<------NtERF2         <---------ALFIN1        --------------->AtSPL8      XXXXXXXXXXXXXXXXXXXXX>MIR856  --------->GLK1(2)        <---------At4g35610      ------>ZmHOX2a(1)  <----------DOF2--------->ANAC46<---------LBD16   cttcaaattcagcacttctcatgaaaacaatcttcctcgtactcatttttgtctcttttgcaatctctccagcaacttcaactgcgccggaagaatgtgg  10707600                  <---------ANAC58                  <---------ANAC58                 --------->SPL7               --------->LBD16           --------->ARR14(2)                                                       --------->ATHB12           ------->TEIL                                                            <---------YAB1           <---------ARR14(2)                                                      --------->ICU4         <---------ZAT18                                                         --------->YAB1  ----        <---------MYB52(2)                                                     --------->ANAC58  <---       <---------At4g35610                                                     --------->ANAC58  ----       --------->At4g35610                                              <---------ICU4           <---       <------NtERF2                                                    --------->ATHB12  <----------     <---------WRKY12               <----------DOF2                    <---------YAB1 <---------WOX13(1)     <---------WRKY38(1)       ---------->DOF2                         ------>ZmHOX2a(1)<------MYB83   <-----------HVH21     ---------->DOF2      ---------->DOF2         --------->TOE2(3) <------MYB46(1)   aagcgagtcagcgaacccgtgcgtcaacaaagctaaagctttgcctctcaaagtcatagcaatcttcgtaatcctcattgcaagcatgattggtgttgga  10707700                                           <---------HSFC1(2)                  <------ZmHOX2a(2)             <---------RAP2.6(3)       ----------->GT1                        <---------ARR11(3)            --------->RAP2.6(2)     --------->MYB52(1)       <---------ANAC55(2)      <----------DOF2           -------->P --------->HSFC1(2)<---------ANAC55(1)  ------>ZmHOX2a(1)           <---------MYB111(2)            --------->ANAC55(2)  <---------YAB1 ----->GLK1(1)<---------MYB52(1)------>MYB46(1)         --------->YAB1     --------->LBD16 ------GLK1(1)----------->HVH21 ------>MYB83 --------->ARR11(3)           <---------LBD16 ----->At4g35610      <---------ANAC58--------->ANAC58  <--------HAHB4   <---------LBD16       <----- ------At4g35610      <---------ANAC58--------->ANAC58 <---------YAB1   ------>NtERF2    --------->ARR14(2) -RAV1(1)   --------->ANAC46------>ZmHOX2a(1)<---------ARR11(3)        --------->DEAR3(1)<---------ARR14(2)   gctcctctctttagccgtaacgtttcgttcctccaaccagacggaaacatcttcactatcattaagtgtttcgcctccgggatcatccttggaaccggtt  10707800            <---------MYB59           --------->ANAC55(2)                                                     --------->GLK1(1)         <-----------GT1                                                           <---------GLK1(1)     ------->MYC3                                         --------->LBD16         <---------ARR14(2)     <-------MYC3                                        <---------O2             --------->ARR14(2)     <-------MYC2                                     --------->GLK1(2)         --------->LBD16     ------->MYC2                           <---------ANAC58             <----------DOF2   ------->TEIL<---------GLK1(2)            <---------ANAC46         <-----------GT1   ---------->ID1 -----DOF2 ----------->RAV1(2)              <---------ANAC58  <---------ANAC46<---------LBD16   ttatgcacgttttacctgattctttcgaaatgttgtcatctatatgtcttgaagagaacccgtggcataaatttcctttctccggatttctcgctatgtt  10707900  Previous    Next  AGI:  At4g19690.1    Description:  IRT1 (IRON-REGULATED TRANSPORTER 1); cadmium ion transmembrane transporter/ iron ion transmembrane transporter/ manganese ion transmembrane transporter/ zinc ion transmembrane transporter. Identical to Fe (IRT1) [Arabidopsis Thaliana] (GB:Q38856;GB:Q8LBP0); similar to ZIP8 (ZINC TRANSPORTER 8 PRECURSOR), cation transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G45105.1); similar to Fe(II) transport protein IRT1 [Arabidopsis halleri subsp. halleri] (GB:CAE30485.1); contains InterPro domain Zinc/iron permease; (InterPro:IPR003689) Range:  from: 10707436    to: 10708169    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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