Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------CCA1(2)                        <---------At4g35610                         ------>ZmHOX2a(1)                           <---------ANAC58                        <---------MYB59                          <---------YAB1                       ------>ZmHOX2a(2)                       --------->ATHB51    --------->AHL20(2)<------ZmHOX2a(2)                        --------->AHL20(2)  <------ZmHOX2a(2)   <---------AHL20(1)--------->ARR14(2)             <----------DOF2<-----------GT1--------->ARR14(2)   --------->AHL20(1)--------->ARR11(3)            <---------MYB52(1)<---------ANAC58        --------   <---------ARR11(3)<---------ARR11(3)         ---------->ID1<---------MYB52(1)  <---------ARR14(2) --GLK1(1)           <---------ARR14(2)     <---------YAB1    --------->ICU4    --------->LBD16   tccaaaatatttatgctattgtagatcctaacctttctatcttgttattcttcgttttttggccattattttcgtttcgctcccgatccaaattccaaag  10500800                         <----------ID1                     --------->MYB52(1)           --------->YAB1                     --------->YAB1         --------->AtLEC2                    --------->ICU4        <---------ANAC58         <---------AHL20(1)               <---------ANAC46                                          <         <---------ARR11(3)               <---------ANAC58                   <---------DAG2        --         --------->ARR11(3)              --------->ALFIN1                    <----------DOF2       <- -->DOF2 --------->AHL20(1)           <---------TOE2(3)           <-----------GT1          --------->MYB52(1)   tacttcaacaatatcttatgcaataacgagacaaacacttaaggtcgtgcaagaatagtgtctgtttttcactgattcacttttacagagaacaaactga  10500900                               --------->AHL20(2)         --------->ATHB12      --------->YAB1        <---------YAB1        <---------ATHB51        --------->ICU4        <---------ATHB12     <---------YAB1      --------->ANAC58                                        ---------->DOF2 ---------AHL20(2)       --------->AtLEC2               >>>>>>>>>GATA-1 <---------ANAC58 ------->AHL20(2)        --------->ANAC58             ----------->GT1   <---------ANAC58 --------AHL20(2)   ----------->HVH21            <---------ATHB12--------->AHL20(2)             <----   attaattttgattattgaatagttgacatgcaataatatttgttaatccaaatgaatagataaaaaaaaaaattccttgagagtaaagaaactaaatttt  10501000                                                                                     <----------DOF2                                                                                     <---------GLK1(1)                                                                             ----------->HVH21                                                                       --------->ANAC46                                                                       --------->ANAC55(2)                                  ---------->DOF2                      <---------ANAC55(2)         <-                                 <------ZmHOX2a(1)                     --------->ANAC58            <-                             --------->TOE1(2)                         --------->ANAC58  <---------ETT(1)                        --------------->AGL15                         <---------LBD16--------->GLK1(1)           <-----------GT1 --------->ZAT6                        --------->AHL20(2) <---------ANAC58 -----HSFB2a(2)         <---------------AGL15                    <---------AHL20(2) <---------ANAC58<   ggaagacaatttttaactagttttctctaaaactaggaaagtcagaaaatgagaaaacaaatttgattttattacggaagtgaagggctttccgacaaat  10501100                        ------>MYB46(1)                        ------>MYB83                      --------->DEAR3(1)              <---------WRKY12                      ------->GAMYB  --------->YAB1  --------->WRKY18(1)             ------>MYB83            --------->AHL20(2)             ------>MYB46(1)        <---------ATHB12<-----------HVH21             --------->MYB52(1) ------------>CBF   ----------->GT1                               <---           --------->AtMYB61 --------->ANAC58  --------->GLK1(2)                                 ====           <---------MYB59   --------->ANAC58  <---------ARR14(2)                              <----- --------ANAC58      --------->MYB46(3)        --------->ARR14(2)----------->GT1        <-------TEIL --------ANAC58      --------->DEAR3(2) ---------->DOF2   --------->ANAC58       --------->TOE2(3) ----------DOF2      <------------AtMYB77--------->DAG2   --------->ANAC58       --------->TOE1(3)   tgctttgctcagaccaaactgtaaccgacccaagcccaataaaaaagcgaatcgggtcaaacgaaaacagataattcagaaaaccctaaattcgtttctc  10501200                                            <---------ZAT18                                            <---------ZAT14                                            <---------At4g35610                                            --------->ZAT18                                            --------->ZAT14                                       <---------ANAC58                                       <---------ANAC58                                       <---------ANAC46                                      <-------TEIL                                     --------->ALFIN1                                   <---------ZAT2                                   <---------TGA1a --------->At4g35610                                   --------->ZAT2  --------->LBD16                                   --------->At4g35610      ------>ZmHOX2a(1)   <---------DAG2                                   <---------At4g35610      --------------------->WRI1                         --------->At5g28300--------->At4g35610     --------->MYB52(1)           *TSS         ----------->GT1<---------ANAC55(1) <---------ANAC46     <----------DOF2    <-----------GT1---------->DOF2<---------TOE1(2)<---------At4g35610       --------->ANAC46 -------DOF2       ==========================bZIP_DOF      --------->TOE2(3) --------->ANAC58 ============================================bZIP_DOF <---------MYB46(3)     --------->ANAC58 -------------------ANAC81       <-----------RAV1(2)<---------MYB52(1)     <---------ALFIN1        <<   tttttttttcttcattctgagcaaagcagtaactctcaggtgcgtgtgctctccgctggttccttagaacaatcggcacacgctttttcatttcaatctt  10501300                                                                                 <---------DAG2                                                                                 <----------DOF2                                                                                <---------ANAC58                                                                            <---------At4g35610                    <---------TOE1(2)                                       --------->At4g35610                   <-----------RAV1(2)                                    <-----------RAV1(2)               --------->ARR11(3)                                       <-----------HVH21               <---------ARR11(3)                              <---------TOE2(3)<---------ANAC58               <-----------ARR10      <-----------GT1      --------->ARR11(3)<---------GLK1(2) <<<<<<<TBF1--------->ANAC55(2)    <---------GLK1(1)  --------->AtLEC2 --------->ANAC46   cttcttctactcttaagtatctcaggtactaatctcgatttctctatttctcgtccatggagatttagatttcaagtcagatgcttttcgatttgttaca  10501400                              <---------ANAC46                             <---------At4g35610                             --------->ZAT2                             --------->At4g35610                             <---------ZAT2                             <---------YAB1                   <---------WOX13(1)                                 --------->YAB1             <---                 --------->ATHB12                         --------->TOE1(3)                     <----      <---------YAB1        <---------TOE1(2)             --------->TOE2(3)                     -----   <---------AHL20(2)--------->ATHB12             <---------ETT(2)   <---------YAB1---------->DOF2 <-   gatgtataatttttgtaatcgattgattcgcagcttggattgtattgagccatcgacataccttcaaaattcttataattgtattgaaagtgtttgaatt  10501500                                                                                       --------->CCA1(2)                                                                               <----------DOF2                                                                             <---------------AGL15                                                                             --------------->AGL15           <-----------GT1                                                  <-----------------AGL3 ------AHL20(2)                                                             <-----------------AGL2 -----AHL20(2)                                                 <---------GLK1(2)      <---------ARR11(3) ---->AHL20(2)<----------DOF2    <---------GLK1(1)        <-----------GT1<----------DOF2          --- --------TOE2(3)              <---------YAB1        <----------DOF2  <---------ZAT18  --------->ARR11(3)   taatgtttttttttttctttctctcgattgttttgatttctgggcaagtgtcaacttttgtaacagattagtgacctttctctttatagatatgtggaag  10501600                                                                               <---------ANAC58   <--                                                                               <---------ANAC58   <--                                                                 <---------ANAC58                 <--                    <-------TEIL                                 <---------ANAC58           <--------             <---------ARR14(2)                                  <---------ANAC46           <--------             --------->ARR14(2)                   <---------ANAC46       <---------YAB1   <---------TOE2(3)        <-----------GT1                           <---------ANAC58       <---------AHL20(2) --------- ------>GLK1(2) --------->MYB59                   <---------ANAC58    --------->ICU4   --------------   aatttggaatttacaaattcggttcaccatttttatctgaagcactgaatttgcgtttttcaagcttgagtgaatattatttcttggctcttaagatttt  10501700  Previous    Next  AGI:  At4g19200.1    Description:  proline-rich family protein. contains InterPro domain XYPPX repeat (InterPro:IPR006031) Range:  from: 10498887    to: 10500733    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g19210.1    Description:  ATRLI2 (Arabidopsis thaliana RNase L inhibitor protein 2). similar to ATRLI1 (Arabidopsis thaliana RNase L inhibitor protein 1) [Arabidopsis thaliana] (TAIR:AT3G13640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63739.1); similar to RNase L inhibitor-like protein [Oryza sativa (japonica cultivar-group)] (GB:AAM19067.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65893.1); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain 4Fe-4S ferredoxin, iron-sulphur binding; (InterPro:IPR001450); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro Range:  from: 10501211    to: 10505228    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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