Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ----------->GT1                                                --------->ARR14(2) ------>ARR11(3)             <------ZmHOX2a(2)      <---------------AtSPL8 -------ARR11(3)            <---------ARR11(3)      <---------------AtSPL3   --------->ARR11(3) >ARR11(3)                  --------->ARR11(3)   --------->AHL20(2) <-----------GT1 -ARR11(3)        ---------->DOF2       <---------REM1(1) --------->ICU4     <---------ARR11(3)  <---   gatttagtaaaaactagaaacaaagaagaagatcgatatttgttgtaacaaaaaaatgtactgatcagatttacccaaagattttagtgcctcaaaaact  10382500                  --------->ANAC58                                                                  -                  --------->ANAC55(2)                                                               -                  --------->ANAC55(1)                                                               -                  <---------ANAC55(2)                      <---------ALFIN1                       ---           ---------->DOF2 --------->MYB111(1)     --------->ATHB12                               ---        --------->ANAC58  <--------P           --------->ATHB12                       <----------DOF2        --------->ANAC58--------->YAB1        <---------YAB1                       --------->ARR11(3)      ---------->DOF2--------->MYB52(1)  <---------At4g35610      ------->TEIL     <---------ARR11(3) --------HVH21    --------->ANAC58      ------->TEIL <---------WOX13(1) <----------DOF2     ---------   ttcacatgaaaagcaaagacaagtaatggtaagtagagtctgcatctcatgagtgattgcccaacttgaaccctcttttcatttagacctttgtgaaaga  10382600              ------>MYB46(1)              ------>MYB83             --------->ANAC46            <---------MYB111(1)            <---------MYB111(2)            <---------MYB55(2)                                                              ------>ZmHOX2a(1)            --------->MYB46(3)                                                             --------->TOE2(3)          -------->P                                                                       <---------      <-----------ARR10                                                                    ----------      <---------ARR11(3)                                                                   ==========    --------->ANAC58                                                                 <---------ANAC58    --------->ANAC58                                                                 <---------ANAC58 -------->ANAC46                                                                   <---------ANAC46 -------->ANAC58                                                           <---------------AGL15   -- -------->ANAC58                                                           ========================== -------->RAV1(1)                 <-----------GT1                 <-----------GT1 <---------LBD16 <-- ------>AtMYB61    <---------ATHB12                         <---------ICU4 --------------->AGL15  --- ->DOF2 --------->MYB46(3)   <----------DOF2            <---------AHL20(2)<-----------------AGL2 <---   ccacacaagaactacccaccaataactctctctttttttcttcatttccaaaaactatttattcatttctacaatttctcaatttgggggtgtccttaat  10382700                                            <---------TOE2(3)                                            <---------YAB1                                            <---------TOE1(3)                                 <------MYB83--------->YAB1     <---------YAB1              <---------ANAC46    --------->AHL20(1)           <------MYB46(1)    <---------AHL20(2)           <---------ANAC58    <---------AHL20(1)           <---------ANAC58   --------->YAB1               <---------DEAR3(1)  <---------YAB1                <---------MYB46(3) ------AGL15                    --------->MYB111(2)                    --------->AHL20(1) ----->AGL15                    --------->MYB55(2)                     <---------AHL20(1) =====================================================MADS_MADS  --------->YAB1 ------->ICU4 ---------->DOF2  --------->ALFIN1                <---------YAB1 ======MADS_MADS               <---------ANAC46       --------->ZAT6--------->YAB1          <-------- -------ANAC55(2)    --------->LBD16  <---------------AGL15  <---------AHL20(2)             --------- ------>ANAC55(2)  <---------LBD16  <-------GAMYB   <-----------GT1 --------->AHL20(2)   ---------->DOF2 ------ICU4<---------YAB1   <---------AtMYB61----------->GT1--------->AHL20(2) --------->ANAC55(2)  -   aagtattatatttatgaaaagtccggatgtatggtgggtgttatttatggtaattaacactatttattaataatatttttcatgtgatttcaaaagctga  10382800                                                        --------->YAB1                                                 <-----------GT1                                   --                                    --------->WOX13(1)------>MYB46(1)                          <-----                        <---------WOX13(1)      <-----------GT1                                <-----        <----------DOF2<------------CBF   <---------AHL20(2)                                   ------ -At4g35610           <<<<<<<<<RAP2.2   <----------DOF2<---------ATHB12                        ------ >At4g35610       <----------DOF2 ------------>CBF    ------>MYB83 <---------------AtSPL3  --------->AHL20(2) ------>TEIL   ------->TEIL <----------DOF2    <---------AHL20(2)  *TSS     ---------->DOF2<---------AHL20(2)   tgtactcatgctttgtgaacctttagattgctctatgtcaatcttttattttaacctatcatatgtctaaatgtactgaaaagaaacaccagtttaatta  10382900 <-----------GT1 <---------YAB1                                                          <---------ICU4 ------->YAB1                                                           --------->ICU4          ----- ----AHL20(2)              ------->GAMYB                            <---------ALFIN1            <---- ----AHL20(1)            -------->P                                --------->ANAC46       ------->TEIL --->AHL20(2)           --------->WOX13(1)                       <-----------GT1      ------->MYC3 --->AHL20(1)    <-----------GT1                              <----------DOF2         <-------MYC3   attatacttccctcatatataactatcaaccaagtacaaaacttttgtcaattctcaaaatcaactttcaccacataattatctaacatgtgtatgttcc  10383000       --------->AHL20(2)       <---------AHL20(2)   ----------->GT1  <----------DOF2        <-----------GT1 ---->HSFB2a(2)     <---------DAG2    ------->TEIL      ---------->DOF2 -----HSFB2a(2)  <-----------GT1<-------TEIL --------->ZAT6                                 ---------   aaaaccagtttaaatagaattacttttcagaaaatacatgtatattaactctatctaataaagaagaaacacatacttatctcatagattccattcataa  10383100                                                                        ----------->GT1                                                            ----------->GT1       <---------YAB1                                                           ------->TEIL----------->GT1                                              --------->ANAC58       --------->ALFIN1     <----------DOF2                          --------->ANAC58    --------->DAG2  ----------->GT1 >YAB1                                        --------->ANAC46   ---------->DOF2----------->GT1------   aactatgctttagtgagtaagaaaaccagtaatcaaacacaaattgacaagacactatatggatgtaaaaagtggggaaaaatggtgataaatagtagag  10383200                <---------ARR11(3)                                   <-----------------AGL1                --------->ARR11(3)                                  ------>MYB46(1)                <---------AHL20(1)                                  ------>MYB83                --------->AHL20(1)                           --------->AtMYB61       <----------ID1                <-----------GT1         --------->TOE2(3)       ----------->GT1             <----------TaMYB80        --------->TOE1(3)     ---------->DOF2       <---------YAB1             --------->At4g35610  --------->AHL20(2)   <----------DOF2     <---------CCA1(2) <---------DAG2  <---------AHL20(2)  --------->TOE2(3)--------->ANAC46   <---------ALFIN1                <---------CCA1(2) ----->GT1   --------->AHL20(2)   ------->TEIL       ----------->RAV1(1)     --------->HSFB2a(2)    <   aaaattaaaaagaaaaaaaatattcctttataaatgtatatacccatctcttcaccagcacaaccttaccttccattttctgcaacttctccaaatctca  10383300                                                                  =========================RAV                                                                  <-----------RAV1(2)                                                           ----------->RAV1(1)                                                           ===================RAV                                                          ----------->HVH21            <---------ICU4                               --------->MYB46(3)     --------->LBD16                                    --------->ANAC46                       ------    --------->HSFC1(1)                                 <-----------------AGL1               <--------    <---------HSFC1(1)--------->ANAC58                XXXXXXXXXXXXXXXXXXXXX>MIR830*        --------->ARR14(2)    --------->HSFB2a(2)                       ---------->ID1    <-----------HVH21        <---------ALFIN1    <---------HSFB2a(2)  >>>>>>>>>>GT-3b  <----------DOF2--------->LBD16                --------->LBD16 ----------DOF2       --------->ANAC58    --------------------->WRI1           <-----------RAV1(1)   tactttccagaaaatcattttcccaagaaaaataaaactttcccctttgttcttctccccccaacaggtcaggctagtattttgttgttccccaatcctt  10383400  Previous    Next  AGI:  At4g18960.1    Description:  AG (AGAMOUS); transcription factor. Identical to Floral homeotic protein AGAMOUS (AG) [Arabidopsis Thaliana] (GB:P17839;GB:O82732); similar to SHP1 (SHATTERPROOF 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G58780.1); similar to Floral homeotic protein AGAMOUS (GB:Q01540); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 10382867    to: 10388550    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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