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   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                             ---------->DOF2
                           <---------AHL20(2)
                           --------->AHL20(2)
        ---------->DOF2<---------HSFB2a(2)      --------->ZAT6
      --------->YAB1   --------->HSFB2a(2) <------MYB83
<---------ANAC55(2)--------->GLK1(1)       <------MYB46(1)
--------->ANAC55(2)<---------GLK1(1)       ----------->GT1
-------TEIL       <---------ARR14(2)<----------DOF2
------->CCA1(2)  <------ZmHOX2a(1)----------->GT1 --------->ANAC46            ----------->GT1  -----
 
gatacataatcaaaagtagaggatttctaaaaaaatgcggtttatttggttacactaaatcagtttatattggtttcaaaatagtaaaacaaacaaattt  10184900
                                           <------MYB46(1)
                                           <------MYB83
                                      <------MYB46(1)
                                      <------MYB83
                                     --------->MYB59                                               <
                                     <---------AtMYB61                                          ----
                                   <---------MYB52(1)                       ----------->GT1     <---
    <-----------GT1       <---------ATHB12--------->MYB59                   <---------ZAT6     <----
------>GT1              <-----------GT1   <---------AtMYB61   --------->MYB52(1)     ----------->GT1
 
gtaaaattatccagtttgatttttgttcaaccatttcggtttggtttggttcaaagaatgaaacaaaacagaacatatagagataaaacagtgaaatttc  10185000
             <---------ANAC58     <---------At4g35610
          <----------DOF2         <---------ZAT2
         <---------DAG2           --------->ZAT2                                                  --
      <-----------GT1             --------->At4g35610                                         <-----
  --------->ICU4         --------->ALFIN1                                                    <------
  --------->AHL20(2)  <---------DEAR3(1)                                                 ------>NtERF2
------ZmHOX2a(1)     --------->At4g35610                   <---------DDF1       <---------ZAT18  <--
----->HSFB2a(2)     --------->MYB52(1)      --------->YAB1<---------ETT(2)     <---------ANAC58 <---
------HSFB2a(2) <---------WRKY18(1)      <----------DOF2  --------->ETT(2)     <---------ANAC58<----
-----ANAC46  <---------ANAC58  ---------->DOF2<---------YAB1       --------->ZAT6    --------->ANAC46
 
gaggatttattacctttcttgaccagcggtgtcccaaagctgagctttgatgattttttcgtcgacatgaacacttcttgtggcgaactcgacaccgatg  10185100
                                                                   --------->ARR14(2)
                                                                  <---------ARR14(2)
                                                                  <---------GLK1(2)
                                                                  --------->ARR14(2)
                                                                 <------NtERF2
                                                                --------->LBD16
                                                               --------->RAP2.6(2)
                                                               --------->LBD16
                                                              <------NtERF2
                                                              <---------LBD16
  <----------DOF2                                           <---------DEAR3(1)
------->WRKY12                                              --------->ANAC46
----AtMYB61                   <---------REM1(1)             --------->DEAR3(1)
---MYB52(1)               <---------ANAC46               ----------->HVH21  --------->YAB1
-------WOX13(1)         --------->ARR14(2)          <---------GLK1(1)       <---------ICU4         -
----GAMYB               <---------ARR14(2)         <---------GLK1(2)     --------->WOX13(1)   ------
-----MYB46(3)--------->At4g35610             --------->ATHB12------>NtERF2 <---------ATHB12 --------
 
gttgactttgactcgatgctgaattcgtttctggtgaagcgagacaaaagattggattttccgacgccggaatctccaatcaagactagtttgaagagat  10185200
                  --------->ZAT14
            ------>NtERF2
            <---------DEAR3(2)
           <---------RAP2.3(3)
           <---------DEAR3(1)
          <------NtERF2            <---------TOE2(3)
          --------->ATERF1(1)      <---------TOE1(3)
         <---------ATERF1(1)  <--------HAHB4
         <-----------HVH21    --------->ATHB51
         <---------SPL7       <---------ICU4                                                    ----
        <---------DEAR3(1)   <---------YAB1                    ---------->DOF2                ------
-------->YAB1<------NtERF2   --------->ICU4                 ----------->GT1       <---------REM1(1)
--->ARR11(3)<---------RAP2.3(1) <---------YAB1              --------->YAB1       --------->ARR11(3)
--->GT1<------NtERF2  --------->ATERF1(1)           <-----------GT1    <---------GLK1(1)  *TSS<-----
 
aatcgtagtcgtcgtcggctctgtaggctcccattattaaggtatttgatagaagttacaaaatcgtaaagaagaattcagagagatgttgcaatatgat  10185300
                                                         <---------DOF5.7(2)
                                                      <------MYB46(1)
                                                      <------MYB83
                                                     <---------MYB46(3)                         ----
                                                    <---------ANAC46                          <-----
                                                  --------->MYB52(2)                          ------
                      <---------ANAC46            <---------MYB46(3)    --------->ATHB12     -------
                 <---------MYB46(3)          <---------ANAC46          <----------DOF2 <---------ZAT6
-->ZmHOX2a(2) <-----------RAV1(1)         --------->ICU4 --------->MYB52(1)            ----------->GT1
--->ARR11(3)  --------->ALFIN1            <---------ATHB51 <----------ID1<------------CBF   <-------
----ARR11(3)<---------ANAC46        XXXXXXXXXXXXXXXXXXXX>MIR774B---------->DOF2  <---------AtMYB61 -
 
ctaatgaaatgaatgatgtgttgttgtgttttgtaatgaaatgaaattatgggtagtgggtaacgacgaaagggcttattggttttggtagtgttataaa  10185400
                                  --------->AHL20(2)
                                 <---------YAB1
                               --------->YAB1
                     --------->ATHB12
     --------->AHL20(2)        <---------ICU4
     --------->YAB1  <--------HAHB4
  --------->YAB1     <---------ICU4
----->YAB1           --------->YAB1<---------AHL20(2)
----AHL20(2)        <---------ATHB12
--->AHL20(2)      --------->WOX13(1)    <---------AtLEC2
-->YAB1     <---------YAB1    --------->ICU4                                    --------->ICU4
--YAB1--------->AHL20(1)   <---------YAB1                          ---------->DOF2
-------->YAB1<------ZmHOX2a(1)<---------YAB1             ------->TEIL   <---------MYB46(3) ---------
 
aataagaataatattaggattcaatcatttgttattattatatgcatgacttagcatatgtatatgttttgaaagtcgttggaaagattagagaacaaac  10185500
                          ------>NtERF2
                         --------->ANAC58
                         --------->ANAC46
                         --------->ANAC58
                         --------->DEAR3(1)
                         --------->ATERF1(2)
                         <---------ATERF1(2)
                         --------->RAP2.6(2)                                  <---------AHL20(2)
                 <----------DOF2                                              <---------YAB1       -
            <---------LBD16<------NtERF2<---------WRKY38(1)                  --------->YAB1        <
        --------->ARR11(3)<------NtERF2 <---------WRKY12                     <---------AHL20(1)    <
        <---------ARR11(3)<---------RAP2.6(3)                                --------->AHL20(2)   <-
   <---------TOE2(3)    <---------RAP2.6(2)--------->ANAC46       <------ZmHOX2a(1)           ------
>MYB46(3)<---------HSFB2a(1)     ------->TEIL                    ----------->GT1 <---------YAB1   <-
 
atgtttgacgaaatcttcgggtttatggccgccatgaacttggtaaacgcagaacaatatacacttgcaggaaaaaacaatattattatgtcttcaattc  10185600
                                                                                             <------
                                                                                             <------
                                                                                            --------
                                                                               --------->ARR11(3)
                                                                               <---------ARR11(3)
                                                                              --------->CCA1(1)
                                                                              <---------CCA1(1)
                                                                    --------->ALFIN1        <-------
                                                          --------->YAB1      --------->GLK1(1)
       <---------AHL20(2)                                <---------YAB1       <---------GLK1(1)
-------->ATHB51                                       --------->AHL20(2)      <---------RVE1(1)
--------ATHB1            <---------AHL20(2)           <---------AHL20(2)      --------->RVE1(1)
---------ICU4<---------ANAC58                        --------->AHL20(2)      <---------ARR11(3)
--------ATHB12           --------->AHL20(2)          <---------AHL20(2)      --------->ARR11(3)
--->AHL20(2) <---------ANAC58                        --------->AHL20(1)  <------ZmHOX2a(1)  <-------
--------ATHB51<----------DOF2                        <---------AHL20(1)<---------------------WRI1
 
aataattcaatttatagcttttctcaaataaaatcacagggaaatttgttcataaataaaattatagcaatgtgtaggaagatatctaggtaaaagattt  10185700
                                                <---------RVE1(1)
 ----------->GT1                               <---------ARR11(3)                      --------->ICU4
<---------TOE2(3)                              --------->ARR11(3)                      <---------YAB1
---CCA1(1)                                    <------ZmHOX2a(1)            --------->ZAT14
---RVE1(1)                                  <---------TOE2(3)              <---------ZAT14 <--------
->ARR11(3)                                  <---------TOE1(3) --------->ZAT6        <---------TOE2(3)
--GLK1(2)            <-----------GT1<-----------GT1        ----------->HVH21   <---------ZAT6
--ARR11(3)          <-----------GT1<-----------GT1<---------AHL20(2)      <---------ZAT6  <---------YAB1
 
tttatggtatattgtcatgaaattttccatttctatttttaacttctaaggattttttttatatgacactaaatatagtgtagagttgagattattgttg  10185800
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AGI:  At4g18430.1   
Description:  AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding. similar to AtRABA1f (Arabidopsis Rab GTPase homolog A1f), GTP binding [Arabidopsis thaliana] (TAIR:AT5G60860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66374.1); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain RNA polymerase sigma factor 54, interaction; (InterPro:IPR00207
Range:  from: 10183728    to: 10185291    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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