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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
---------->
DOF2
<---------
HSFB2a(2)
--------->
ZAT6
--------->
YAB1
--------->
HSFB2a(2)
<------
MYB83
<---------
ANAC55(2)
--------->
GLK1(1)
<------
MYB46(1)
--------->
ANAC55(2)
<---------
GLK1(1)
----------->
GT1
-------
TEIL
<---------
ARR14(2)
<----------
DOF2
------->
CCA1(2)
<------
ZmHOX2a(1)
----------->
GT1
--------->
ANAC46
----------->
GT1
-----
gatacataatcaaaagtagaggatttctaaaaaaatgcggtttatttggttacactaaatcagtttatattggtttcaaaatagtaaaacaaacaaattt
10184900
<------
MYB46(1)
<------
MYB83
<------
MYB46(1)
<------
MYB83
--------->
MYB59
<
<---------
AtMYB61
----
<---------
MYB52(1)
----------->
GT1
<---
<-----------
GT1
<---------
ATHB12
--------->
MYB59
<---------
ZAT6
<----
------>
GT1
<-----------
GT1
<---------
AtMYB61
--------->
MYB52(1)
----------->
GT1
gtaaaattatccagtttgatttttgttcaaccatttcggtttggtttggttcaaagaatgaaacaaaacagaacatatagagataaaacagtgaaatttc
10185000
<---------
ANAC58
<---------
At4g35610
<----------
DOF2
<---------
ZAT2
<---------
DAG2
--------->
ZAT2
--
<-----------
GT1
--------->
At4g35610
<-----
--------->
ICU4
--------->
ALFIN1
<------
--------->
AHL20(2)
<---------
DEAR3(1)
------>
NtERF2
------
ZmHOX2a(1)
--------->
At4g35610
<---------
DDF1
<---------
ZAT18
<--
----->
HSFB2a(2)
--------->
MYB52(1)
--------->
YAB1
<---------
ETT(2)
<---------
ANAC58
<---
------
HSFB2a(2)
<---------
WRKY18(1)
<----------
DOF2
--------->
ETT(2)
<---------
ANAC58
<----
-----
ANAC46
<---------
ANAC58
---------->
DOF2
<---------
YAB1
--------->
ZAT6
--------->
ANAC46
gaggatttattac
ctttcttgaccagcggtgtcccaaagctgagctttgatgattttttcgtcgacatgaacacttcttgtggcgaactcgacaccgatg
10185100
--------->
ARR14(2)
<---------
ARR14(2)
<---------
GLK1(2)
--------->
ARR14(2)
<------
NtERF2
--------->
LBD16
--------->
RAP2.6(2)
--------->
LBD16
<------
NtERF2
<---------
LBD16
<----------
DOF2
<---------
DEAR3(1)
------->
WRKY12
--------->
ANAC46
----
AtMYB61
<---------
REM1(1)
--------->
DEAR3(1)
---
MYB52(1)
<---------
ANAC46
----------->
HVH21
--------->
YAB1
-------
WOX13(1)
--------->
ARR14(2)
<---------
GLK1(1)
<---------
ICU4
-
----
GAMYB
<---------
ARR14(2)
<---------
GLK1(2)
--------->
WOX13(1)
------
-----
MYB46(3)
--------->
At4g35610
--------->
ATHB12
------>
NtERF2
<---------
ATHB12
--------
gttgactttgactcgatgctgaattcgtttctggtgaagcgagacaaaagattggattttccgacgccggaatctccaatcaagactagtttgaagagat
10185200
--------->
ZAT14
------>
NtERF2
<---------
DEAR3(2)
<---------
RAP2.3(3)
<---------
DEAR3(1)
<------
NtERF2
<---------
TOE2(3)
--------->
ATERF1(1)
<---------
TOE1(3)
<---------
ATERF1(1)
<--------
HAHB4
<-----------
HVH21
--------->
ATHB51
<---------
SPL7
<---------
ICU4
----
<---------
DEAR3(1)
<---------
YAB1
---------->
DOF2
------
-------->
YAB1
<------
NtERF2
--------->
ICU4
----------->
GT1
<---------
REM1(1)
--->
ARR11(3)
<---------
RAP2.3(1)
<---------
YAB1
--------->
YAB1
--------->
ARR11(3)
--->
GT1
<------
NtERF2
--------->
ATERF1(1)
<-----------
GT1
<---------
GLK1(1)
*
TSS
<-----
aatcgtagtcgtcgtcggctctgtaggctcccat
tattaaggtatttgatagaagttacaaaatcgtaaagaagaattcagagagatgttg
caatatgat
10185300
<---------
DOF5.7(2)
<------
MYB46(1)
<------
MYB83
<---------
MYB46(3)
----
<---------
ANAC46
<-----
--------->
MYB52(2)
------
<---------
ANAC46
<---------
MYB46(3)
--------->
ATHB12
-------
<---------
MYB46(3)
<---------
ANAC46
<----------
DOF2
<---------
ZAT6
-->
ZmHOX2a(2)
<-----------
RAV1(1)
--------->
ICU4
--------->
MYB52(1)
----------->
GT1
--->
ARR11(3)
--------->
ALFIN1
<---------
ATHB51
<----------
ID1
<------------
CBF
<-------
----
ARR11(3)
<---------
ANAC46
XXXXXXXXXXXXXXXXXXXX>
MIR774B
---------->
DOF2
<---------
AtMYB61
-
ctaatgaaatgaatgatgtgttgttgtgttttgtaatgaaatgaaattatgggtagtgggtaacgacgaaagggcttattggttttggtagtgttataaa
10185400
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
--------->
ATHB12
--------->
AHL20(2)
<---------
ICU4
--------->
YAB1
<--------
HAHB4
--------->
YAB1
<---------
ICU4
----->
YAB1
--------->
YAB1
<---------
AHL20(2)
----
AHL20(2)
<---------
ATHB12
--->
AHL20(2)
--------->
WOX13(1)
<---------
AtLEC2
-->
YAB1
<---------
YAB1
--------->
ICU4
--------->
ICU4
--
YAB1
--------->
AHL20(1)
<---------
YAB1
---------->
DOF2
-------->
YAB1
<------
ZmHOX2a(1)
<---------
YAB1
------->
TEIL
<---------
MYB46(3)
---------
aataagaataatattaggattcaatcatttgttattattatatgcatgacttagcatatgtatatgttttgaaagtcgttggaaagattagagaacaaac
10185500
------>
NtERF2
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
DEAR3(1)
--------->
ATERF1(2)
<---------
ATERF1(2)
--------->
RAP2.6(2)
<---------
AHL20(2)
<----------
DOF2
<---------
YAB1
-
<---------
LBD16
<------
NtERF2
<---------
WRKY38(1)
--------->
YAB1
<
--------->
ARR11(3)
<------
NtERF2
<---------
WRKY12
<---------
AHL20(1)
<
<---------
ARR11(3)
<---------
RAP2.6(3)
--------->
AHL20(2)
<-
<---------
TOE2(3)
<---------
RAP2.6(2)
--------->
ANAC46
<------
ZmHOX2a(1)
------
>
MYB46(3)
<---------
HSFB2a(1)
------->
TEIL
----------->
GT1
<---------
YAB1
<-
atgtttgacgaaatcttcgggtttatggccgccatgaacttggtaaacgcagaacaatatacacttgcaggaaaaaacaatattattatgtcttcaattc
10185600
<------
<------
--------
--------->
ARR11(3)
<---------
ARR11(3)
--------->
CCA1(1)
<---------
CCA1(1)
--------->
ALFIN1
<-------
--------->
YAB1
--------->
GLK1(1)
<---------
AHL20(2)
<---------
YAB1
<---------
GLK1(1)
-------->
ATHB51
--------->
AHL20(2)
<---------
RVE1(1)
--------
ATHB1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
RVE1(1)
---------
ICU4
<---------
ANAC58
--------->
AHL20(2)
<---------
ARR11(3)
--------
ATHB12
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ARR11(3)
--->
AHL20(2)
<---------
ANAC58
--------->
AHL20(1)
<------
ZmHOX2a(1)
<-------
--------
ATHB51
<----------
DOF2
<---------
AHL20(1)
<---------------------
WRI1
aataattcaatttatagcttttctcaaataaaatcacagggaaatttgttcataaataaaattatagcaatgtgtaggaagatatctaggtaaaagattt
10185700
<---------
RVE1(1)
----------->
GT1
<---------
ARR11(3)
--------->
ICU4
<---------
TOE2(3)
--------->
ARR11(3)
<---------
YAB1
---
CCA1(1)
<------
ZmHOX2a(1)
--------->
ZAT14
---
RVE1(1)
<---------
TOE2(3)
<---------
ZAT14
<--------
->
ARR11(3)
<---------
TOE1(3)
--------->
ZAT6
<---------
TOE2(3)
--
GLK1(2)
<-----------
GT1
<-----------
GT1
----------->
HVH21
<---------
ZAT6
--
ARR11(3)
<-----------
GT1
<-----------
GT1
<---------
AHL20(2)
<---------
ZAT6
<---------
YAB1
tttatggtatattgtcatgaaattttccatttctatttttaacttctaaggattttttttatatgacactaaatatagtgtagagttgagattattgttg
10185800
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AGI:
At4g18430.1
Description:
AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding. similar to AtRABA1f (Arabidopsis Rab GTPase homolog A1f), GTP binding [Arabidopsis thaliana] (TAIR:AT5G60860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66374.1); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain RNA polymerase sigma factor 54, interaction; (InterPro:IPR00207
Range:
from: 10183728
to: 10185291
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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