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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-----------
GT1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
-------
<---------
AHL20(2)
<-------
--------->
AHL20(2)
<-------
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
ARR11(3)
--------->
AHL20(2)
--------->
YAB1
<---------
ARR11(3)
--------->
AHL20(2)
-------
AHL20(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
------>
AHL20(2)
<---------
ANAC46
--------->
AHL20(2)
--------->
ICU4
<--
------
AHL20(1)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC46
<---------
AHL20(2)
----->
AHL20(1)
--------->
ARR11(3)
<---------
AHL20(2)
------>
MYB46(1)
<---------
YAB1
----
----->
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
------>
MYB83
<---------
ANAC58
--------->
AHL20(2)
------
AHL20(2)
<---------
CCA1(2)
<---------
AHL20(1)
<---------
MYB59
<---------
ANAC58
<---------
YAB1
aaaattatcatctacttctatatcttatttcttgaatatatatatatatatatatacctatctattaagttgcttatcgttcacattattaatttataat
10061000
<---------
ANAC58
<---------
ANAC58
<---------
ANAC55(2)
<----------
DOF2
<---------
ANAC46
<---------
DAG2
--------->
AHL20(2)
-->
YAB1
<-------
TEIL
---------->
DOF2
<----------
DOF2
--------->
YAB1
<
--
YAB1
------->
TEIL
--------->
AHL20(2)
<---------
DAG2
<---------
ZAT6
--
--
AHL20(2)
--------->
TOE2(3)
------->
TEIL
----------->
GT1
<------
ZmHOX2a(1)
---------
GT1
<---------
ICU4
<-----------
GT1
--------->
YAB1
--------->
ANAC55(2)
----->
AHL20(2)
<---------
WOX13(1)
--------------->
AtSPL8
<---------
ICU4
--------->
MYB52(1)
taactttatgtacatttgactgataaacattaaaaagacttatttgaacctttttgtatatgaattcaaaattatactgataaaataacgtgaggaagaa
10061100
<------
ZmHOX2a(1)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ANAC46
--------->
AHL20(2)
<---------
ICU4
<----------
DOF2
--------->
AHL20(1)
<-----------
GT1
---------->
DOF2
--------->
AHL20(2)
--------->
AHL20(2)
---------->
DOF2
<---------
YAB1
--------->
AHL20(2)
--------->
ICU4
----------->
GT1
---------
YAB1
>>>>>>>>>
MYB98
----------->
GT1
--------->
ANAC58
------->
AHL20(1)
<---------
AHL20(2)
<---------
AHL20(2)
<---------
TOE2(3)
--------->
ANAC58
atattatgaaagcttttaacatataaattaatttgcataggaaaaaattacacaacttaaattgagattagttaagaaacaagaaaaaacaaagttgata
10061200
--------->
AHL20(2)
================
--------->
ANAC55(2)
<---------------
AGL15
--------->
ARR14(2)
--------->
YAB1
<-----------
GT1
--------->
ANAC58
--------->
ANAC58
--------->
TOE2(3)
--------->
AHL20(2)
--------->
ANAC46
--------->
ANAC55(1)
<---------
DAG2
-----------------
--------->
ANAC58
<---------
ANAC55(2)
<----------
DOF2
<-----------
GT1
--------->
ZAT6
--------->
ANAC58
<---------
ARR11(3)
<---------
AHL20(2)
<-----------
GT1
--------->
ANAC46
--------->
ARR11(3)
--------->
AHL20(2)
---------->
DOF2
<----------
DOF2
------->
TEIL
<---------
CCA1(2)
--------->
ANAC55(2)
gaaaaataaaagtattaacacgactttggattcacacacgtaccattgaattatatctcaatacacttttacttaattaacttatttccaaaccaagtag
10061300
<----
------
--------->
ANAC46
---------->
DOF2
------
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
<---------
AHL20(2)
<---------------
AGL15
------>
MYB83
--------->
ANAC58
--------->
YAB1
<----------
DOF2
<-------
TEIL
------>
MYB46(1)
-------
<---------
ARR11(3)
--------------->
AGL15
<---------
MYB59
--------->
MYB46(3)
==========================================
MADS_MADS
--------->
CCA1(2)
*
TSS
--------->
ANAC58
>
AGL1
<---------
YAB1
==========================================================================
ccaaaatcatattattcttctctctcttccttttttgagtttcaaaatgcataaatacgagaacgagagacgaagaccaaatt
aaagtccaagcaccaat
10061400
--------->
LBD16
<-----------
ARR10
<-----------------
AG
------>
MYB83
<---------
CCA1(2)
-----
ATHB12
--------->
TOE2(3)
<---------
ANAC58
<-----------
GT1
>
MYB46(1)
--------->
TOE2(3)
--------->
TOE1(3)
---------->
ID1
<-----------
GT1
>
MYB83
<------
ZmHOX2a(1)
<---------
MYB59
---------->
DOF2
<------------------------
ANAC81
-->
WOX13(1)
--------->
TOE1(3)
--------->
TOE2(3)
<---------
CCA1(2)
<----------
DOF2
==================
MADS_MADS
------>
MYB46(1)
<---------
ANAC58
<----------
DOF2
<----------
DOF2
ctagacctcttaggaaaaaaacctaaaaacctaatccccaaacctaaaaggcttatctcatctcttcttctttgtcttctttactctttttttacctctc
10061500
-------->
P
------->
GAMYB
<---------
MYB55(2)
<---------
MYB52(2)
--------->
MYB46(3)
<---------
MYB111(2)
<---------
At4g35610
<---------
MYB111(1)
--------->
ARR14(2)
--------->
REM1(1)
--------->
YAB1
------>
ZmHOX2a(2)
--------->
ICU4
--------->
GLK1(1)
--------->
ANAC58
<------
ZmHOX2a(2)
--------->
ANAC46
<---------
ARR11(3)
--------->
ANAC58
--------->
ARR11(3)
<-------
GAMYB
<---------
YAB1
--------->
GLK1(1)
<---------
ANAC58
------->
TEIL
--------->
ATHB12
<---------
GLK1(1)
<---------
ANAC58
<---------
ARR14(2)
tcttcattgttcttcacc
atgtctaatgaaaccagagatctctacaactaccaatacccttcatcgttttcgttgcacgaaatgatgaatctgcctactt
10061600
------>
MYB83
------>
MYB46(1)
<---------
HSFC1(2)
--------->
HSFC1(2)
<---------
At4g35610
<---------
GLK1(1)
--------->
ZAT2
<---------
HSFB2a(2)
--------->
At4g35610
--------->
HSFB2a(2)
--------->
ARR11(3)
--------------->
AGL15
<-----------
GT1
<---------
ARR11(3)
----
<---------------
AGL15
----------->
GT1
<---------
GLK1(2)
<---------
ZAT2
<-----------------
AGL3
--------->
MYB52(1)
<---------
ICU4
---------->
DOF2
<---------
ANAC46
caaatccatcttcttatggaaacctcccatcacaaaacggttttaatccatctacttattccttcaccgattgtctccaaagttctccagcagcgtatga
10061700
------
<-------
--------
<-------
<-------
<-------
----------->
GT1
<--
<---------
MYB52(1)
<--
--------->
SPL7
--------
--------->
MYB52(1)
--------
------>
MYB46(1)
---------
------>
MYB83
<---------
TGA2(2)
<---------
MYB59
-----------
------>
ZmHOX2a(1)
--------->
ARR14(2)
<---------
ICU4
<----------
DOF2
<---------
ARR14(2)
<---------
YAB1
<---------
AtMYB61
=================================
HOX2a_HOX2a
--------->
bZIP60(1)
--->
TEIL
<----------
DOF2
--------->
TOE2(3)
<------
ZmHOX2a(2)
<---------
bZIP60(1)
atctctacttcagaaaacttttggtctttctccctcttcctcagaggttttcaattcttcgatcgatcaagaaccgaaccgtgatgttactaatgacgta
10061800
<---------
DEAR3(1)
<---------
AtMYB61
--------->
ALFIN1
--->
TGA2(2)
--
TGA2(1)
<---------
ANAC58
<--
->
TGA2(1)
<---------
AtLEC2
----
--
ANAC55(2)
--------->
GLK1(2)
--
ANAC46
<---------
ANAC58
<---------
ARR14(2)
--
bZIP60(1)
--------->
ANAC58
--------->
ARR14(2)
-------
ATHB12
<---------
GLK1(2)
-------
YAB1
--------->
ANAC46
--------->
LBD16
<-----
->
ANAC55(2)
--------->
ANAC58
------>
ZmHOX2a(1)
--------->
LBD16
----------
->
bZIP60(1)
--------->
AtLEC2
<-----------
GT1
<---------
At4g35610
--------->
LBD16
-->
STF1
<-------
TEIL
<---------
GLK1(1)
--------->
At4g35610
<---------
LBD16
>
TGA1
<---------
MYB46(3)
<---------
TOE2(3)
------>
ZmHOX2a(1)
<---------
LBD16
<---------
MYB52(1)
atcaatggtggtgcatgcaacgagactgaaactagggtttctccttctaattcttcctctagtgaggctgatcaccccggtgaagattccggtaagagcc
10061900
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AGI:
At4g18170.1
Description:
WRKY28 (WRKY DNA-binding protein 28); transcription factor. Identical to Probable WRKY transcription factor 28 (WRKY28) [Arabidopsis Thaliana] (GB:Q8VWJ2;GB:O49720); similar to WRKY8 (WRKY DNA-binding protein 8), transcription factor [Arabidopsis thaliana] (TAIR:AT5G46350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72742.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657); contains InterPro domain Transcription factor, WRKY group IIc (InterPro:IPR017396)
Range:
from: 10061384
to: 10062852
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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