Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <-----------------AGL1                                                             --------->ARR14(2)                                                             <---------ARR14(2)                                                            --------->HSFC1(2)                                                            <---------HSFC1(2)                                                       --------->HSFB2a(2)                                                       <---------HSFB2a(2)                                                   <---------SPL7          <---------ARR14(2)                                                   <---------MYB52(1)     <---------GLK1(1)                                               --------->MYB52(1)--------->LBD16    <---------ANAC58                                             --------->REM1(1) <-----------------AG <---------ANAC58                                             --------->MYB46(3)<---------LBD16      <---------ANAC46                                         <---------At4g35610<---------HSFB2a(1)  <--------P   <------NtERF2                         --------->At4g35610--------->HSFB2a(1) <-------GAMYB<<<<<<<< ------>ANAC46                        <---------ZAT2  <---------ANAC55(2) --------->GLK1(1)  <<<<<<<< ------>ANAC58                        <---------At4g35610  --------->HSFB2a(1)  <---------MYB52(1) ------>ANAC58                        --------->ZAT2  <---------ANAC46  <------ZmHOX2a(1)    <<<<<<<< -----ALFIN1    ------>ZmHOX2a(1)     --------->At4g35610  ----------->ARR10 <---------LBD16 <<<<<<<< ->ANAC46 <---------ALFIN1           <-----------RAV1(1)   <---------HSFB2a(1) --------->LBD16 --GT1   ------>ZmHOX2a(1)         ------>ZmHOX2a(1) --------->SPL7   <---------TOE2(3)     ---------   acggcctcatcctcactcctctgtaatgcctcttctcctctgctgctacaaccggtacgggaagttccggtttaggatttccggttgcgaattgaatcca  9753500                     ------>ZmHOX2a(2)                   --------->ARR11(3)                <---------ZAT18             <---------MYB46(3)            <---------AtMYB61            --------->ALFIN1            <---------DEAR3(1)          <------MYB46(1)          <------MYB83         --------->MYB46(2)       <---------MYB52(1)     <------MYB83----------->ARR10     <---------DEAR3(2)         <-------GAMYB     <------MYB46(1)<------ZmHOX2a(2)    --------->MYB59<---------ARR11(3) --------->ATHB12            --------->ARR14(2) <GATA-2 --------->MYB55(2)    <---------MYB46(3)                 <---------ARR14(2)                - <GATA-1 <---------DEAR3(1)    <---------DEAR3(2)                <------ZmHOX2a(1)                  < <GATA-4 --------->MYB52(2)   <---------DEAR3(1)              <------ZmHOX2a(1)                   <-- <GATA-3 <---------MYB46(3) ------->GAMYB             ---------->DOF2                       <-------- >ARR14(2)<---------ANAC46 <---------DEAR3(1)     --------->ZAT6 <---------HSFB2a(1)      --------->TOE1(2)   cttggttcggttcggtggtgcgatcttcaacggcggttttcgattggattgaacagtaacgcgaggaggattcgattggaacgtgaaggaatcgttcgat  9753600                                                                          <------MYB83                                                                         <---------AtMYB61                                                                     --------->LBD16                                                 ----------->HVH21 <---------LBD16              <---------GLK1(1)                  ----------->TGA1<-----------GT1 -------->At4g35610                    --------->LBD16        <---------ICU4 ---------At4g35610                  <---------LBD16     <------ZmHOX2a(2)<------MYB46(1)        <--- ---------RAV1(2)                --------->ARR11(3) --------->bZIP60(1)  --------->MYB59         ---- -TOE1(2)     --------->GLK1(1)  <---------ARR11(3) <---------bZIP60(1)<---------MYB52(1)     -------   tcagatggaatttcagatttcacatcgaaatcaaaaatctccggtttgggagtgacgagatcgattatttccggtttggtttcaaattcagaaaactcga  9753700                ----------->GT1                <---------ANAC55(1)                --------->ANAC55(2)                <---------ANAC58                <---------ANAC46                <---------ANAC55(2)                --------->TGA1a                <------NtERF2                             ------------                <---------O2               <---------MYB46(3)                            <-----------                <---------TGA1a           <---------AtMYB61                             <------------                <---------ANAC58          --------->ALFIN1                        <---------ARR11(3)                --------->bZIP60(1)     <------MYB83                              <---------ARR14(2)                <---------bZIP60(1)     <------MYB46(1)                           --------->ARR11(3)                <---------bZIP60(2)    --------->MYB55(2)     ------->GAMYB       --------->ARR14(2)             ----------->TGA1          <---------MYB46(3)  --------->MYB52(1)   ----------->ARR10 ------ARR14(2) --------->O2           <---------AtMYB61  <---------WRKY38(1)  <------ZmHOX2a(1) ----->ARR14(2)----------->STF1     --------->ATHB12    --------->ANAC58    <---------HSFB2a(2)    -- -->ANAC46   ----------->HVH21 --------->MYB46(3)       --------->ANAC58    --------->HSFB2a(2)  <---   aaccggtttgatcaaatgacgtgaaatcgttcatccatcgattggtggtggcagtagtaggcaacggagacaattcgtcgaggagatacttcttgatgag  9753800                     <---------REM1(1)                   <---------ANAC46                   <---------ANAC58                   <------MYB83                   <---------ANAC58                   <------MYB46(1)                  <---------AtMYB61                  --------->MYB55(2)    <---------At4g35610    --------->At4g35610 --->AGL15        --------->MYB52(2) ----AGL15        --------->MYB46(2)                                           --------->ZAT14 -----AG          <---------MYB46(3)                                           *TSS -------->DOF2   <---------MYB55(1)                                     ----------->HVH21         --- ---ZmHOX2a(1)  <---------MYB52(1)   <------ZmHOX2a(1)  <------ZmHOX2a(1)     --------->ALFIN1   ----   gaaaagagctgatacttcgtttggtgtagccattttggaggaaacagagaattgaagaggaagagggatttgatttgacagtggagaagagagagtggaa  9753900                                                          <---------ARR11(3)                                                 <XXXXXXXXXXXXXXXXXXXXMIR419                       ------------>CBF          <---------ARR11(3)                                 <                     <<<<<<<<<<WRKY18         ----------->RAV1(1)   --------->TOE2(3)             <--            ---------->DOF2       --------->GLK1(2)   <-----------RAV1(2)                         <--      <---------AHL20(2) --------->WOX13(1)   ====================RAV                            <---    <-----------TBP  --------->ANAC58      --------->ANAC46<---------RVE1(1)               <---------LBD16 -------->GT1        --------->ANAC58<----------DOF2 ------>ZmHOX2a(1)    <---------ARR11(3)    <---- ----->DAG2<------ZmHOX2a(1)  <---------------------WRI1 <------ZmHOX2a(1)--------->ARR11(3) --------   aggtgtatttataggaaagagtcaagtcaatgagagactctttcaaggcaacatcctcaggattttttaaacttaaaatctaaaattatcaaatgcggga  9754000            <---------ANAC46                                                                ---------            <---------ANAC58                                                                ---------            <---------ANAC58                                                                <------NtERF2          --------->ANAC46                                   --------->MYB52(1)             <--------   ------->TEIL                                              <---------DOF5.7(2)          <---------RAP2.6(2) ---------ANAC46                                            <---------WRKY12 <---------MYB46(3) ----MYB83--------->ANAC58                                  <---------WRKY38(1)    <---------YAB1<--- ----MYB46(1)        <---------LBD16  --------->ATHB12      <---------WRKY45<---------AtMYB61    ---- ------AtMYB61     <-----------GT1 <---------MYB52(1)      --------->DOF5.7(2)  <-------TEIL<-------- ----P <---------REM1(2)      <-----------GT1             <-----------HVH21 --------->ALFIN1--------- ->LBD16  --------->ANAC58  <-----------GT1       <-----------GT1       ------>ZmHOX2a(2) <----------   tggtgtatgtacacgcgtgtttcaccggttttacaccgtttgattagattataaacccctcgtcaacggtttgatcgtgtggttcatcaatggcagctgg  9754100                                   <---------ZAT18                                 <------NtERF2                                 <---------ZAT18                                 --------->ZAT18                               <---------RAP2.3(3)                               <---------DEAR3(1)    <----------ID1          --------->MYB59 >ZAT2                 <---------AHL20(2) -->RAV1(2)            --------->AHL20(2) -ZAT2                 <---------YAB1                         <---------YAB1 <---------AHL20(2) ------ANAC46         --------->AHL20(2)                    --------->At4g35610                    <- ------->GT1          <---------AHL20(2)       <---------ANAC58         --------->ANAC58           -- -At4g35610        <---------AHL20(1)          <---------ANAC58--------->ATHB12      <-------TEIL  -- >At4g35610        --------->AHL20(2) <-----------------AGL3<---------At4g35610<-----------GT1     <- -RAV1(2)          --------->AHL20(1)<----------DOF2 <----------DOF2    --------->ANAC58       ------   ggtaaaaaaacaaaacacaaatattttaattaggctgcgctctaatattgggtttctttggcagatgattagacaagaatttatcgattcatgtttatca  9754200                                          <---------ZAT6                                        <---------ANAC58                              --------->DAG2   <---------------AtSPL8     <---------------AtSPL8         <-----------GT1   <---------------AtSPL3    ---------->DOF2                --------->AHL20(2) --------ARR11(3)         --------->YAB1<---------ANAC46 <---------AHL20(2) ------->AHL20(2)        <---------YAB1 <---------ANAC58<---------AHL20(2) ------->AHL20(1)     --------->ICU4 <----------DOF2    --------->AHL20(2)              --------->ANAC58 --------AHL20(1)   ----------->GT1 <---------DAG2     <---------WOX13(1)               --------->ANAC58 --->YAB1          --------->ICU4 ------->TEIL      <---------AHL20(2)        --------->GLK1(1)------   aaatattagtacggtttagtaatagttattataaagtacctttcgtgttaatatttgattaatttactactcgttgtgagaattcttcgcatgcatgcat  9754300                           --------->At4g35610                       <---------ARR11(1)                       <-----------ARR10                     <---------SPL7                  ------>NtERF2                <---------RAP2.6(2)                        <---------AHL20(2)               --------->At4g35610    ----------->GT1  --------->AHL20(2)--------->MYB52(2)      --------->YAB1--------->RAP2.6(2)           <-------MYC3        --------->YAB1 ->TEIL        <---------At4g35610--------->ATHB12------->MYC3       <---------YAB1   ttgcaatatcaaaatttagcggccgtatcaactcaatgtttggataaacacacgtttttatataaaaacttatgatagttgcaaaatttgatggaagaaa  9754400  Previous    Next  AGI:  At4g17490.1    Description:  ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor 6 (ERF6) [Arabidopsis Thaliana] (GB:Q8VZ91;GB:O23591;GB:O80387); similar to ERF5 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT5G47230.1); similar to ethylene responsive element binding factor, putative [Brassica oleracea] (GB:ABD65051.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (Int Range:  from: 9752836    to: 9753879    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version