Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                           <---------ICU4                                                                                           --------->YAB1                                                                                        --------->YAB1                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)           ------>ZmHOX2a(2)                                                       --------->ARR11(3)         <---------ARR11(3)                                                        <---------ARR11(3)         --------->ARR11(3)                                                        <---------AHL20(1) -----------GT1                                            <-----------GT1       ------->TEIL-------- ----->ARR14(2)    <---------MYB46(3)      --------->ARR14(2)      <-----------GT1 --------->AHL20(1)   attcactagatgatctaatatttgttgatttttagtccaaaatcgaattcactagagaaattaacctatttagcacttacatgaatatattgatcatcat  9727400                                                                              <---------AHL20(2)                                                                     ------>ZmHOX2a(2)                                   --------->ANAC55(2)              <---------GLK1(1)                                   <---------ANAC46                 <------ZmHOX2a(2)           -----                             <----------DOF2                        --------->GLK1(1)           ----- ---------WOX13(1)        <---------TOE1(3)                        <---------ARR11(3)           ----- -->ATHB12               <-----------GT1                           <---------AGP1               ----- ---ICU4             <----------DOF2      <----------DOF2    <----------DOF2  --------->AHL20(2)----- --YAB1       <---------REM1(1)   <---------LBD16       <----------DOF2 <----------DOF2         ----- ->ICU4     --------->At4g35610  <-----------GT1<-----------GT1    --------->ARR11(3)           -----   tgatagacttaagcagttgtagtcttttaagctttttacgggttcttttttttctcttcttttctttaagatctctttatttatatgtctaaatctaaac  9727500                                                                                             --------                                                                                            ---------                                                                                      <-----------GT1                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)      <---------HSFB2a(2)                                                         <---------ICU4      --------->HSFB2a(2)                                <---------TOE2(3)       --------->ICU4 <----     <---------LBD16                                <---------ICU4               <---------ATHB51<--- ---->YAB1                                          --------->ATHB12             <---------AHL20(2) ---->ANAC55(2)                                    --------->ICU4                --------->AHL20(2) ------>GT1                                        <---------YAB1               <---------AHL20(1) <- ---->ANAC46                         <---------CCA1(2)<---------WOX13(1)     --------->AHL20(2) ----- ---->ANAC58               <---------AHL20(2)   <---------YAB1            --------->CCA1(2) <-------- ---->ANAC55(1)         --------->AHL20(1)    <------ZmHOX2a(1)          <---------ARR11(3) <-------- ---->ANAC58   <---------ZAT6     --------->LBD16--------->YAB1         <------ZmHOX2a(1)  <---------TOE2(3)   gtaattttctggatttattgttaacatatattaatccccatatcagaaggatgataattgatgttgatatatcaggatataaaataattaactaatgatt  9727600 ->ATHB12 >ICU4                                                              <----------DOF2 -----AHL20(2)                                      --------->AHL20(2) ------AHL20(2)                                     --------->AHL20(1) --------YAB1                        <---------YAB1 <---------AHL20(2) ---->AHL20(2)          <----------DOF2  ------>ZmHOX2a(2)       --------->ZAT6 -YAB1 ----------->RAV1(1)  <-----------GT1   --------->YAB1   <-----------GT1  ---------->DOF2------ -ATHB12         <-----------GT1   --------->YAB1   <---------AHL20(1)     --------->ZAT6     <------   tattttagccaacaaaatataacatacttttaacaaatcgtgatcgaataacaataaattctaaataacactttaaaacactaaaagtcttttgaaatca  9727700                                                            ---------->DOF2                                                           <---------MYB52(1)                                                         <---------HSFB2a(2)                                                         <---------ANAC58                                                         --------->ANAC55(2)                                                         --------->HSFB2a(2)                                                    --------->At4g35610                                                    *TSS <---------ANAC58                                                    --------->ZAT2               <---------ATHB12                     <---------At4g35610          --------->ANAC46     --------->YAB1    <---------At4g35610  --------->REM1(1)          --------->ANAC58  <---------ICU4   --------->ANAC58       ------>ZmHOX2a(1)     <---------ATHB12      --------->ICU4    --------->ANAC58<---------CCA1(2)                  <---- ------------>CBF   --------->YAB1         >>>>>>>>>>AtWER--------->LBD16                   <-------- --->YAB1------->GAMYB   --------->YAB1  --------->ANAC58<---------ANAC46                   <-------- ---ATHB12--------->ANAC58 <---------YAB1--------->ANAC58<---------ANAC55(2)         ------>ZmHOX2a(1)   taaaccaataacaccccatgaataaaaacataattagaaacttacgcatgcatcagcttccgtaaatctcctacatctctctctctcctctctgcttttt  9727800                                 <---------ANAC55(2)                                 --------->ANAC55(2)                              --------->ARR14(2)                                                    <                              <---------ARR14(2)                                                    -                         ----------->GT1                                                           <-                         <---------At4g35610                                    <---------AtMYB61  <- -------GT1              --------->At4g35610                                 <------NtERF2        <-- -DAG2                 <-----------RAV1(2)                        --------->GLK1(1)               --- --DOF2           --------->At4g35610                             <---------ARR14(2)  <---------At4g35610   accttctagggtttttgatcatctctcaggtgaatacgttttggtataatctcataccaatgtctgcgaattccaagtcggagaggtctgcttctcaatc  9727900                                         <---------WRKY12                                  ----------->HVH21                                  --------->ATERF1(1)                                  <------NtERF2                                 <-----------HVH21                                 <-----------TGA1                                <---------bZIP60(1)                                <---------TGA2(1)            <---------MYB46(3)  --------->TGA2(1)      --------->bZIP60(2)          <------NtERF2         <---------ANAC58       --------->TGA1a         --------->MYB55(2)     <---------ANAC58       <---------O2         <---------MYB46(3)     --------->bZIP60(1)    --------->O2         ------>NtERF2          <---------ANAC46       ===================bZIP_DOF        <---------DEAR3(1)     <------NtERF2          ------>NtERF2        --------->ALFIN1   <---------ANAC58           --------->LBD16     <---------DEAR3(1)    <---------bZIP60(2)       --------->RAP2.6(2)  <---------ARR14(2)       <---------ANAC58        <---------At4g35610  ----------->HVH21        ===============================================bZIP_DOF                  -  --------->ARR14(2)       <---------ANAC46        --------->At4g35610                             -- <------NtERF2             <---------TGA1a         <---------ZAT2                            -------- --------->ATERF1(1)       <---------O2  <---------WRKY38(1)                                 -------- ---------ATERF1(1)        --------->O2 --------->WRKY18(1)                               --------->ZAT14 -------->LBD16          <-----------HVH21         --------->ZAT2                    --------->At4g35610 --------ANAC46          --------->REM1(2)     <-----------HVH21      ------>ZmHOX2a(1)   <---------ZAT14 --------DEAR3(1)     ===============MYC_MYB   <-----------TGA1<----------DOF2       <---------At4g35610 -------LBD16         ------->GAMYB    <--------ZAP1 --------->DEAR3(1)  <----------DOF2  <---------ZAT18 ------>At4g35610   <---------At5g28300<-----------HVH21 <---------CCA1(2)          <-----------HVH21   ggcggagacggtggctgtttctaaccgtgtcgtggcgtcacggtcaagtcgtcagccgcgtctctctttctcctcctttgctccctcatcagagcacgat  9728000                                                          ----------->HVH21                                                        <---------DEAR3(2)                                                       <---------DEAR3(1)                                                       <---------At1g77200                                                       --------->ETT(1)                                                       <---------DREB2C(2)                                                       <---------ANAC46                                                       <---------DEAR4(1)                                                      <------NtERF2                                                     <-----------HVH21                 <------ZmHOX2a(1)        --------->At4g35610                         --------->ALFIN1                <------ZmHOX2a(1)        <---------At4g35610      --------->LBD16    ----------->HVH21             --------->ALFIN1       --------->GLK1(2) <---------GLK1(1)        --------->LBD16         --------->MYB52(1)        < -------->TOE1(3)        --------->GLK1(1)       <---------DEAR3(1)      --------->ARR14(2)         < --------->RAV1(2)--------->At4g35610     <------ZmHOX2a(1)              <---------ARR14(2)         < ->ANAC58    <---------GLK1(1)  --------->ANAC46<---------LBD16        ----------->ARR10            < ->ANAC58    --------->GLK1(1) <---------LBD16--------->ALFIN1 <------ZmHOX2a(1) <------ZmHOX2a(1)<--   aacctgaagaagctgaaatccgatgagatttctcccgcgagagaggaagtgccggtgtcggtgaaggagagagaagaaacggaggaggaggaagcgaaga  9728100                                                                                        --------->ALFIN1                                                                                  --------->ALFIN1                                                                                  <---------DEAR3(1)                                                                                  <---------ANAC46                                                                                 --------->At4g35610                                                                                 <---------ABI4(1)                                                                                 --------->ATERF1(1)                                                                                 <------NtERF2                                                                                 <---------At4g35610                                                                                <---------RRTF1(1)                                                                                <---------RAP2.3(1)                                                                                <---------ORA47(2)                                                                                <---------ERF1                                                                                ------>NtERF2                                                                                <---------RAP2.6(1)                                                                                <---------ATERF1(1)                                                                               <---------RAP2.6(2)                                                                               <---------RAP2.3(3)                                                                               <---------ANAC58                                                                               <---------RRTF1(2)                                                                               <---------RRTF1(3)                                                                               <---------RAP2.3(2)                                                                               <---------DREB2C(2)                                                                               <---------DEAR3(1)                                                                               <---------ATERF1(2)                                                                               --------->ATERF1(2)                                                                               <---------ANAC46                                                                              <------NtERF2 <--------                                                                             <---------MYB46(3)                                                                             <---------ERF1 ---------                                                                             --------->ABI4(2)                                                                  <---------AtMYB61  --------->ALFIN1                                                                  ----------->ARR10 <------NtERF2                                                               <---------ANAC46<---------ANAC58            <-----------HVH21                                  <---------DEAR3(1)<---------LBD16            <---------SPL7                                    <---------LBD16<---------ATERF1(1)       --------->HSFC1(2)                                   --------->ANAC46 ------>NtERF2<------ZmHOX2a(1)       <---------HSFC1(2)                                  <---------At5g28300<---------ABI4(1)       --------->HSFB2a(1)                                 <---------LBD16  <---------AtMYB61       <---------HSFB2a(1)  <-----------RAV1(1)          <---------ZAT14    ----------->HVH21<------- ------->PIF5               <---------AtMYB61          --------->REM1(2)    --------->ALFIN1<-------- <-------PIF5  <---------TOE1(1)                    <---------ANAC46        <---------DEAR3(1) <----- ---------bZIP60(2)     <---------ANAC58       --------->MYB52(1) <---------TOE2(2) --------->ATERF1(1) ---------ANAC46        <---------ANAC58      <---------ARR14(2) <------NtERF2--------->ATERF1(1)  <- ---------ANAC58   <------ZmHOX2a(1)     ---------->DOF2 <---------REM1(2) --------->ATERF1(1)<------ ---------ANAC58--------->LBD16 <---------MYB46(3)  <---------ANAC58     <---------DEAR3(1) --------- ----ZmHOX2a(1)<---------TOE2(1)--------->MYB55(2)  <---------ANAC58    <---------LBD16<------ZmHOX2a(1)   ggacgtggaatcttcgtccgaggaaggcttatggtggttcgaagaaaggaaacggcgtgttcacggcggaggtttgcggtggcggcggaggaggaggttc  9728200                                                                      --------->MYB46(3)                                                                    --------->ARR14(2)  <---------MYB46(3)                                                                    <---------ARR14(2) <---------DEAR3(1)                                                                   <------NtERF2       --------->ALFIN1                                                                <------NtERF2          <---------AtMYB61 -HSFB2a(1)                                                    ------>NtERF2          <------NtERF2 >HSFB2a(1)            <------NtERF2                           --------->LBD16        <---------ABI4(1) --SPL7                <-----------RAV1(2)                    <---------LBD16         <-------GAMYB -HSFC1(2)    --------->GLK1(1)    --------->RAP2.6(2)       <---------LBD16         <---------DEAR4(2) --TEIL --------->GLK1(2)        <---------At4g35610      --------->GLK1(1)         <---------DREB2C(2) --------DEAR3(1)<-----------RAV1(2)<---------RAP2.6(3)   <---------GLK1(1) --------->LBD16  <------- ---ARR14(2)  <---------GLK1(1)  --------->At4g35610    <------ZmHOX2a(1) <---------LBD16   <-------- >HSFC1(2)--------->YAB1  <------ZmHOX2a(1)        <------NtERF2<---------LBD16     <---------DEAR3(1)   ggaggtgaagaatcagaaatcaggcgcaggaattgagccgaaatcgaacaggcagagaggaatcccggcggaatcacccggattaggcggtggtgaggtt  9728300  Previous    Next  AGI:  At4g17440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60410.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60410.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60410.3); similar to hypothetical protein 40.t00065 [Brassica oleracea] (GB:ABD65177.1); contains InterPro domain Protein of unknown function DUF1639 (InterPro:IPR012438) Range:  from: 9727752    to: 9729275    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version