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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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   <---------ANAC46
   <---------ANAC58
   <---------ANAC58             --------->GLK1(1)
----->ABI4(2)                  --------->ARR11(3)
---->ALFIN1                    <---------ARR11(3)
----MYB52(1)               ---------->DOF2  <---------GLK1(2)                                    ---
-->LBD16               ----------->RAV1(1) --------->At4g35610                         ---------->DOF2
-LBD16                <----------ID1       <---------At4g35610                        --------->AHL20(2)
 
gctgttccttggctgtagcaaaaaaacaacaaaagaactccaaatcagatgctctcaagtctcactaactcaacaagacttaagaacaaataaagactaa  9693500
                                                                          --------->ANAC46
                                                                        <---------ATERF1(1)
                                      --------->ANAC58                 <---------DEAR3(1)
                                      --------->ANAC46                 <---------ETT(2)
                                      --------->ANAC58                 <---------WRKY38(1)
                                     ------->TEIL                      <---------WRKY12
                                   <---------ZAT18                     --------->ETT(2)
                             --------->ARR11(3)                  ---------->DOF2
                             <---------ARR11(3)                ----------->HVH21
       --------->REM1(1)     --------->GLK1(2)                --------->LBD16
  --------->At4g35610<---------ARR14(2)                      <---------ANAC55(2)                   -
 --------->ARR11(3)  --------->ARR14(2)                      <---------ANAC46                  -----
 <---------ARR11(3)--------->LBD16 --------->ZAT14           <---------ANAC58               --------
------->DOF2      <---------ANAC46 <---------ZAT14           <---------ANAC58               <-------
 
gaaagagcttacatcagagccccgtatacaaaaatctgtgcacgtagttgcacttgttgcaagtccgtgaaaggtcgacgcagaatacttgagagagcag  9693600
                       --------->STY1(1)
                       <---------STY1(1)
                     <---------ANAC46
          --------->LBD16
        <---------LBD16--------->ALFIN1
      <---------ARR14(2)                                                                           -
      --------->ARR14(2)        ---------->DOF2                                                   --
---------->GT1       <---------ANAC58           <----------DOF2                                   <-
---->At4g35610       <---------ANAC58      ---------->DOF2                                   <------
->At4g35610 <--------P<---------SPL7   --------->ANAC58                                      <------
--At4g35610<---------MYB52(1)<--------P--------->ANAC58                 <---------ZAT14      <------
 
aagagttcaaatccggtagacttgccgtaggggttgaaagggacccaaaagcttttagagcagggctctgaagacttcgctgtttctcagtagattgtgt  9693700
                                                                                                 <--
                          <-----------GT1                                                        ---
----->ZmHOX2a(2)          --------->MYB52(1)                                                     <--
------->At4g35610       <---------WOX13(1)                                        --------->ZAT6 ---
--------At4g35610    <---------YAB1                                          <----------DOF2<-------
---ANAC58          <----------DOF2               <----------DOF2            <---------DAG2 ---------
---ANAC58  --------->ANAC58                   <---------ALFIN1      --------->ALFIN1       <--------
---ANAC46  --------->ANAC58  ------->GAMYB  ------>NtERF2           <---------REM1(1)     ----------
 
gatctgaatatgagaagccaaactttgattaacagcatttgttttgcctccactttgaaactgttcaataggtgtagccccttttacactagttcctttt  9693800
                                                --------->ARR11(3)
                                                <---------GLK1(2)
                                                <---------ARR14(2)
-------HSFB2a(2)                              ----------->ARR10
------>HSFB2a(2)                          <---------At4g35610
-------HSFC1(1)                           --------->At4g35610             *TSS
------>HSFC1(1)                       <---------ARR14(2)               --------->At4g35610
---DOF2<----------DOF2                --------->ARR14(2)         <----------DOF2
------>AGL15                         <---------GLK1(1) <----------DOF2 --------->ZAT2              <
-------AGL15                         --------->GLK1(1)<---------ANAC58 <---------ZAT2     <---------ARR11(3)
------->AGL2 ------>ZmHOX2a(1) ----------->RAV1(2)    <---------ANAC58 <---------At4g35610--------->ARR11(3)
 
ctagaagtctcttttcctacagatttagatgttcgcctgggtttccgctcagattttgctttggaagactttgcagctgttttatctaagctagatgttg  9693900
               --------->YAB1
             --------->GLK1(2)
          ------------>CBF
         --------->AtMYB61
        --------->MYB46(3)
      --------->ANAC46
    ------>ZmHOX2a(2)
   <------ZmHOX2a(2)                                                                            <---
  <---------ARR14(2)                                                                          ------
  --------->ARR11(3)                                                                         -------
  --------->ARR14(2)                           --------->ANAC58                              <------
  <---------ARR11(3)                           --------->ANAC58                              -------
 <---------GLK1(1)                            <---------------------WRI1         --------->MYB46(3)
 --------->GLK1(1)                           <------ZmHOX2a(1) ----------->RAV1(1)           <------
------ZmHOX2a(1)                            <----------ID1<---------ICU4<-----------GT1      -------
 
aaggagatcccaccacaatctgaataaacaaaaacaaatgctatgtaaggacgaaacatactaatgccacagaattcaccttcaacaactgatgaagata  9694000
          ------->TEIL
     --------->CCA1(2)
    --------->ARR11(3)
    <---------ARR11(3)                                                                             -
------ANAC55(2)                                                        --------->At4g35610         -
--->CCA1(2)      <----------ARF1                                       <---------At4g35610     <----
-->ARR11(3)  --------->LBD16   ----------->GT1                         --------->ZAT2         ------
---ARR11(3)  <---------LBD16 <---------ANAC58                          <---------ZAT2         <-----
-->ARR14(2) <---------LBD16  <---------ANAC46              <-----------GT1      <------ZmHOX2a(1)  <
---ARR14(2) <---------ANAC46 <---------ANAC58   <----------DOF2   <----------DOF2        <-------TEIL
-->ARR11(1)<---------LBD16<--------P      <-----------GT1 <-----------GT1    <-----------RAV1(2)  <-
 
tgtaagagatatgtaccggggagacaagggtagcttgtgaaaatataacagctttggaaattttccctgctttcagctgatcaggagttaagttcatttc  9694100
                                    <---------At4g35610
                                    --------->At4g35610
                                    <---------ZAT2
                                    --------->ZAT2
                                <------ZmHOX2a(2)
                                --------->CCA1(2)
                               --------->AGP1
    <---------AtMYB61          --------->ARR14(2)               ------>ZmHOX2a(2)
-------->ZAT2                  <---------ARR11(3)             <---------ARR11(3)
-------->At4g35610             <---------ARR14(2)        --------->GLK1(2)
-------GT1                     --------->ARR11(3)  --------->LBD16      <----------DOF2
--->ZAT14                     --------->GLK1(1)   --------->ANAC58      <---------DAG2
----ZAT14                     <---------GLK1(1)   --------->ANAC58     <---------ANAC58
---------ZAT2              --------->LBD16        --------->ANAC46     <---------ANAC58 ---------->ID1
----------RAV1(1)        <---------LBD16    ---------->DOF2   --------->ARR11(3)    <---------MYB52(1)
 
actgctggaggtctcatttctattcaagaccggagatccagcagacataaaacccgaaatattctgatcttctggctttttgacactgtttgtctctgtg  9694200
 <---------AHL20(1)                                  --------->AHL20(2)                         ----
 --------->AHL20(2)                                 <---------AHL20(2)                       <------
 <---------AHL20(2)                  --------->GLK1(2)                              <---------ANAC55(2)
 --------->AHL20(1)        --------->ALFIN1         --------->AHL20(2)              --------->ANAC55(2)
--------->AHL20(2)      --------->ZAT6            <----------DOF2  <---------ARR11(3)       <-------
<---------AHL20(2)    <<<<<<<<<<<<<<<<<LFY   <------ZmHOX2a(1)--------->At4g35610  <-------TEIL <---
 
ttattaaattgaagttcggaagtcttaacagtggggaaagaatcaagaggagtctttaaattagtagcagcatcttctattgcagttacataagacttta  9694300
                                  --------->TOE2(1)
                                  --------->TOE1(1)                   --------->ANAC58
                                 ------>ZmHOX2a(1)         --------->YAB1                         <-
                                 --------->HSFB2a(2)      <---------YAB1 <-------TEIL             --
                            --------->ATERF1(1)  ----------->RAV1(2)  --------->ANAC58            --
----->HSFB2a(2)            <---------ATERF1(1)   --------->At4g35610 <---------------AtSPL8      ---
---ZAT14              --------->ANAC58         <---------ALFIN1   <------ZmHOX2a(1)     <---------ZAT6
---DOF2               --------->ANAC58 --------->ATHB12  <---------ARR11(3)           <---------ANAC58
------HSFB2a(2)      <---------LBD16  <---------YAB1     --------->ARR11(3)           <---------ANAC58
 
cagaagactcagaacatgtagaagcacgggagtctcctagtacgattgcatcacctgcaatatcatcaaggacaagtacatatttcgatgagtgtgagaa  9694400
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AGI:  At4g17330.1   
Description:  ATG2484-1 (Arabidopsis thaliana G2484-1 protein); RNA binding. similar to agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55600.1); similar to agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G55600.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO43081.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66568.1); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Agenet; (InterPro:IPR008395)
Range:  from: 9688900    to: 9693875    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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