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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC46
<---------
ANAC55(2)
--------->
ANAC55(2)
<---------
ICU4
------
YAB1
<---------
ATHB12
--->
YAB1
--------->
ZAT18
----
ICU4
<---------
ZAT14
--------->
ANAC58
---
HAHB4
<---------
ZAT18
------->
TEIL
--------->
AHL20(2)
---
YAB1
--------->
ZAT14
--------->
YAB1
--------->
TOE1(3)
--------->
ANAC46
-->
ICU4
--------->
At5g28300
--------->
WOX13(1)
--------->
TOE2(3)
--------->
ANAC58
ttactaattacgcagttaatggacacttagtggactcgttttcaatcatatatgtatttagaatttgaataaaccttcaaaataaaacaaaacaagaaac
9582900
<---------
ICU4
--------->
REM1(2)
<---------
AHL20(2)
<---------
ANAC58
--------->
ICU4
<---------
ANAC55(2)
--------->
AHL20(2)
<---------
ANAC55(1)
<---------
ATHB51
<---------
ARR11(3)
<---------
ARR11(3)
--------->
CCA1(2)
<---------
ANAC58
------->
TEIL
--------->
AHL20(1)
<---------
ARR11(3)
<---------
ANAC58
<---------
CCA1(2)
<---------
ANAC46
--------->
ARR11(3)
<---------
ICU4
--------->
ARR11(3)
<----------
DOF2
<---------
ANAC58
--------->
ANAC46
--------->
YAB1
<---------
ANAC46
>>>>>>>>>>>>>>>>>
LFY
<---------
AHL20(1)
---
ctatacgtagatataaaacaaaaataattagttatggcttatagtgagatattacaccaatgtatcttttaccaatatataacgtgtacaagtctataca
9583000
--------->
GLK1(1)
<---------
GLK1(1)
<---------
ARR14(2)
--------->
ARR14(2)
<---
<---------
TOE2(1)
-----
<---------
TOE1(1)
-------
--------->
SPL7
--------
--------->
TOE2(2)
<---------
--------->
TOE1(2)
----------
--------->
ANAC55(2)
-----------
<---------
ANAC58
--------->
ATERF1(1)
------->
TEIL
<---------
ANAC55(2)
<---------
ATERF1(1)
<-------
TEIL
<---------
ANAC58
--------->
ZAT2
--------->
CCA1(2)
--------------->
AtSPL3
--------->
At4g35610
<---------
TOE1(3)
<---------
AHL20(2)
<---------
ANAC58
-----------
<---------
TOE2(3)
--------->
AHL20(2)
<---------
ANAC58
-----------
---------->
DOF2
--------->
ANAC46
--------->
YAB1
<------
ZmHOX2a(1)
<---------
At4g35610
------>
MYB46(3)
<---------------
AtSPL8
--------->
YAB1
<---------
SPL7
<----------
DOF2
------>
NtERF2
acaactaagaaaatgaaaaagaattaaggtacacgatgtatatagcaataacaattttaatacgtac
gaggatttgctttgcaatcggggctgccataat
9583100
------
ICU4
---->
ICU4
-->
YAB1
<---------
ANAC46
->
ICU4
<---------
ZAT6
<---------
ANAC58
------
AGL15
---------->
DOF2
<---------
ANAC58
----->
AGL15
<---------
ARR14(2)
XXXXXXXXXXXXXXXXXXX>
MIR773B*
--------->
TOE1(2)
------>
AGL1
--------->
ARR14(2)
<----------
ID1
<---------
ANAC55(2)
------>
AGL3
<---------------------
WRI1
<------
ZmHOX2a(1)
--------->
ANAC58
------>
AGL2
<-----------
HVH21
---------->
DOF2
--------->
ANAC58
aagtagctctagagttaacaaaatcgtcggatagacaaaggagaggcaaaaggacaatgacttgaacaaatagaagaagcaaaacgtgagaatgcttcat
9583200
<---------
YAB1
--------->
YAB1
<------
ZmHOX2a(1)
--------->
ATHB12
-----
<---------
YAB1
<---------
YAB1
<---------
ANAC58
<---------
YAB1
<---------
ATHB12
<---------
ANAC58
----------->
GT1
--------->
TOE2(3)
----------->
GT1
---------
--------->
AHL20(2)
--------->
YAB1
<----------
DOF2
--------->
YAB1
<---------
GLK1(2)
-
attgttgttatcttatctataaatattgtaagattattaatacttctaactctttttcttaacaaatgataggaattgataatagaatttcttatcacaa
9583300
------------>
CBF
<---------
ICU4
--------->
ICU4
<---------
ANAC58
--------->
At4g35610
--------->
AHL20(2)
<---------
ZAT2
<---------
YAB1
<---------
At4g35610
--------->
YAB1
*
TSS
<---------
At4g35610
------------>
CBF
<-----------
TGA1
----->
DOF2
--------->
At4g35610
--------->
YAB1
--------->
bZIP60(2)
>
YAB1
<---------
YAB1
<-----------
TBP
<---------
ANAC58
<------------
CBF
<
-------->
ARR11(3)
----------->
GT1
--------->
ZAT2
<-----------
GT1
------>
ZmHOX2a(2)
<---
aagatagtg
aagatagatgagagacttagtagggtatttatagctgcagctagagtgcttattacaattatacaattgatcgagcatcgtcactattttt
9583400
<-----------
GT1
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
O2
---------->
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
<---------
O2
--------->
TOE1(3)
<---------
AHL20(2)
--------->
AHL20(1)
----------
DOF2
--------->
DAG2
<---------
AHL20(1)
<---------
AHL20(1)
<---------
At4g35610
--------
GT1
---------->
DOF2
--------->
AHL20(2)
--------->
AHL20(2)
--------->
At4g35610
tactttccacttggcaaaaagcttaaagctaactcaatttttttatatagtttaacttggtattaaattaaatgtttacatcatacatctgccaatatag
9583500
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ANAC46
--------->
ANAC55(2)
--------->
ANAC55(1)
<------
MYB83
--------->
ANAC58
<------
MYB46(1)
<---------
YAB1
<----------
DOF2
<-
<--------
P
<---------
GLK1(2)
<---------
AHL20(1)
--
<-------
GAMYB
----------------------->
TaNAC69(2)
<------
ZmHOX2a(1)
<---------
TOE1(3)
---------->
DOF2
--------->
ANAC58
<---------
TOE2(3)
<---------
TOE2(3)
<-------
TEIL
<---------
YAB1
--------->
AHL20(1)
<---------
TOE1(3)
cattagggttggcataaacccagtagattcaaaagtcgattcttattatacgcaatttattctttgatttttgtagtctagattagttaaggagagtatt
9583600
<---------
YAB1
<---------
YAB1
----------->
GT1
<-----------
GT1
<---------
TOE2(3)
--------->
YAB1
<---------
ANAC55(2)
<---------
At4g35610
--------
ARR11(3)
<---------
TOE2(3)
<-----------
RAV1(2)
---------
------->
ARR11(3)
<---------
HSFB2a(2)
---------->
DOF2
<---------
TOE1(3)
<-------
TEIL
agatatcgaattatcaatatagtagtattttagaagattaagtatgtgaacattgtaaagctcagaagattgaggtaacatagttccaatagatgcataa
9583700
--------->
MYB52(1)
--------->
LBD16
<---------
ANAC58
--------->
ZAT6
<---------
ANAC46
<-------
TEIL
--
<---------
ANAC58
---------->
DOF2
<-
<---------
ARR14(2)
--------->
CCA1(2)
<-
--------->
ARR14(2)
----------->
GT1
<-----------
GT1
<--
>
YAB1
<---------
LBD16
---------->
DOF2
------->
TEIL
------>
ZmHOX2a(1)
tctccatttccgtataacacataccgaaattcaaactagtttcaagtgaaaagataaaagatgcatttaacactgaaaatcaattcctaatactctagtt
9583800
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AGI:
At4g17030.1
Description:
ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1). Identical to Expansin-like B1 precursor (EXLB1) [Arabidopsis Thaliana] (GB:O23547); similar to ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2) [Arabidopsis thaliana] (TAIR:AT4G38400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65773.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Pollen allergen/expansin, C-termin
Range:
from: 9581605
to: 9583309
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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