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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                   -
                                                                                                   -
                          <---------DAG2                                                           -
             ------->GAMYB<----------DOF2                                                          -
          --------->MYB52(1)                                                            <----------TaMYB80
       --------->ANAC46  <---------ANAC58                                             --------->YAB1
     ------>ZmHOX2a(1)   <---------ANAC58                                            <---------ATHB12
 ------>ZmHOX2a(1)  --------->ATHB12                                               ------>MYB46(1) -
----->At4g35610 --------->ZAT2                                                     ------>MYB83   --
------At4g35610 <---------ZAT2              <---------AHL20(2) <-----------GT1   <---------MYB59----
 
gctccttcctactcaaccgagctcgattgcttttctcaaatacctatataaacaagattgagaaattcacaaatctaagagagacctaatcatattccct  9428500
                                                                                         --------->ANAC58
                                                                                       <---------ANAC58
                                                                                       <---------ANAC46
                                                                                 <------NtERF2
              <---------HSFB2a(2)                                              ----------->HVH21
              --------->LBD16                                                  <----------ARF1
              --------->HSFB2a(2)                                              --------->ETT(2)
              --------->ANAC46                                                 <---------ETT(2)
             <---------HSFB2a(2)                                              <------NtERF2
------>NtERF2<---------LBD16                                                 <---------ATERF1(1)
<------NtERF2--------->HSFB2a(2)                                             ------>NtERF2
--------->LBD16                                                         <------ZmHOX2a(2)--------->ANAC58
-------->ANAC46--------->LBD16                                         <---------ARR14(2)------>NtERF2
-------->RAP2.6(2)                                                     --------->ARR14(2)<------NtERF2
-------->RAP2.3(2)       --------->ANAC58                        <-----------GT1------>NtERF2
-------->RRTF1(2)        --------->ANAC46                 ----------->ARR10 <---------DEAR3(1)
-------->DEAR3(1)        --------->ANAC58             <---------HSFB2a(2)------>ZmHOX2a(2)
------->RAP2.3(1)      --------->MYB52(1)          --------->GLK1(2) --------->LBD16   <---------ANAC58
----->ANAC46<---------LBD16                       <---------GLK1(2)<---------LBD16 ---------->DOF2
 
cgccgcaaaaacatttcccggaatccaaacgaaaccagaacaaaaatcaacgagaatcgcgaagaaattcaccggatcgctggcgacaaggcgggcaatt  9428600
                                                  ------>ZmHOX2a(1)
                                                 --------->TOE1(3)
                                                 --------->ANAC46
                                                 --------->TOE2(3)
                    <---------ANAC46    ------>ZmHOX2a(2)
                    <---------ANAC58    =================HOX2a_HOX2a
                    <---------ANAC58   ==================HOX2a_HOX2a
                   <------NtERF2       <------ZmHOX2a(2)
                   <---------LBD16    --------->ARR14(2)
                 <---------DEAR3(1)   --------->ARR11(3)
               <---------ANAC58       <---------ARR14(3)
               <---------ANAC58 <-----------RAV1(2)
           ---------->DOF2   ------>MYB46(1)  <---------ARR14(2)
       --------->TOE2(3)     ------>MYB83     --------->ARR14(2)
       --------->TOE1(3)  --------->MYB46(3) <---------CCA1(2)
    --------->GLK1(1) <------NtERF2   <---------ARR14(2)
    <---------GLK1(1)--------->LBD16  --------->ARR14(3)                         <---------DEAR3(1)
------>ZmHOX2a(2)--------->ALFIN1     <---------ARR11(3)           <----------DOF2
 
cgatcggaaacctcaaaagcgtggcgggaaccagcccagacgatcttcatatcctcaacgtcgaactctgctttgtttctctcatcggcgaggtgatcaa  9428700
                                                   --------->HSFB2a(2)
          <---------ANAC55(2)                      <---------HSFB2a(2)
          --------->ANAC55(2)                    --------->HSFB2a(2)
          --------->YAB1             --------->ANAC46                        -----------------------
          ----------->GT1            --------->ANAC58                     <------ZmHOX2a(1)
      --------->ATHB12       --------->At4g35610 <---------HSFB2a(2)     ----------->GT1
     <---------YAB1 <---------GLK1(2)--------->ANAC58                --------->ATHB12             --
     <---------ATHB12--------->GLK1(2)   ---------->DOF2            <---------YAB1         ---------
 
ttccttccatgattcgtaattcagaatctagtagctaaacactcaaaagtttctcgagaaaactctcagagatgataggaaaaaaaaaaaaaaaaaacag  9428800
                                  --------->AHL20(2)                       <---------ANAC46
    ---------->DOF2               <---------AHL20(2)           <---------TOE1(3)    *TSS      <-----
->ANAC81               --------->ZAT6         --------->MYB111(1)         <---------LBD16   --------
--------->GT1        <---------ALFIN1         <---------MYB46(3)  <----------DOF2  ---------->DOF2
>MYB52(1)  <------ZmHOX2a(1)     --------->AHL20(2)            <---------TOE2(3) --------->CCA1(2)
 
agggagaaaaagaaggacaatgcctcactctaccgatttaattgcagagtagttggaagaacaattaagctttttatttcggagataaaagaagagaaag  9428900
                                              <---------ARR11(3)
                                              --------->ARR11(3)
                                              --------->AHL20(2)
                                              <---------AHL20(1)                   ------>NtERF2
                                              --------->AHL20(1)                   ----------->RAV1(1)
                                              <---------AHL20(2)                  ----------->HVH21
                                           --------->AHL20(2)                     <---------ETT(1)
                                          <---------AHL20(2)             <------ZmHOX2a(2)
                                          --------->AHL20(2)            --------->AGP1  ----------->GT1
                                         <---------YAB1                 --------->ARR11(3)
                                       --------->YAB1                   <---------ARR14(2)       ---
       <---------AHL20(2)              <--------HAHB4                   --------->ARR14(2)       ---
   --------->ATHB12                   <---------AHL20(2)      <----------DOF2     --------->ANAC46<-
<------------CBF                <----------DOF2<---------AHL20(2)      --------->At4g35610>>>>>>>>>GATA-1
-----ID1            <----------DOF2   <---------YAB1          ======================================
-->DOF2--------->AHL20(2) <-----------GT1--------->ICU4    <-----------GT1 <---------ALFIN1      ---
 
acaaattgatttaaatatagactcttttttttcttctttctataattaatatattttgggtttatctttttctcagatccactctccgacatagataaaa  9429000
          --------->YAB1
        --------->AHL20(2)
   ----------->GT1
 ------->MYC4
 ------->MYC2
 ------->PIF5
 <-------MYC4
 <-------PIF5
 <-------MYC2
 <-------MYC3<---------AHL20(2)
 ------->MYC3<---------AHL20(1)
<---------ANAC46
--------->TGA1a
--------->PIF3(3)
<---------PIF3(3)
<---------O2 --------->AHL20(2)                      --------->MYB52(1)
--------->O2 --------->AHL20(1)                      <---------DOF5.7(2)
<---------TGA1a                   ------>ZmHOX2a(1) <---------WRKY12
------>TOE1(2)                    --------------->AGL15   ------->TEIL
------------->PIF3(2)             <---------------AGL15--------->MYB46(3)
--------ALFIN1             <---------AHL20(1)       <---------WRKY38(1)         <---------ANAC58----
==========bZIP_DOF         --------->ARR11(3)       <---------WRKY45            <---------ANAC58----
------>TOE2(2)          --------->AHL20(2)  <---------AHL20(2)                  <---------ANAC46----
 
cccacgtggaaaataataaattttggattatatattcctaatataagttaattagtcaacgaatgttgaaaacaaattaagttgtttgcaaataaaacct  9429100
                                                                 <---------ANAC46
                                                               --------------->AGL15
                                                            <---------ARR11(3)
                                                            --------->ARR14(2)
                                                            <---------ARR14(2)
         --------->ICU4                                     --------->ARR11(3)                     -
     ----------->GT1                <---------AHL20(1)     <---------GLK1(1)                       <
--------->ANAC58                   <---------AHL20(2)      --------->GLK1(1)                  ------
--------->ANAC58          --------->ANAC46                --------->ARR11(3)          ----------->GT1
----->ANAC58          <-----------GT1<---------AHL20(2)   <---------ARR11(3)  <---------AHL20(2)  <-
----->ANAC46         <-----------GT1--------->AHL20(1)   <------ZmHOX2a(1)   --------->AHL20(2) <---
----->ANAC58----------->GT1      --------->AHL20(2)  ---------->DOF2  ----------->GT1 <---------ANAC46
 
cgcaagtatggaataatgtgattttttccccctcatatatatatttgactaagaaaaaaaggatatctacgtatagaaaattttatatgctgtataacaa  9429200
                                                                --------->TOE1(3)
                                                                --------->TOE2(3)
                                                               ----------->GT1
                                                  <---------AHL20(2)
                                                 --------->AHL20(2)
                                                 <---------AHL20(1)
    ----------->HVH21                            --------->AHL20(1)
<---------RVE1(1)                                <---------AHL20(2)---------->DOF2      <---------AHL20(2)
<---------CCA1(1)                             --------->YAB1 --------->ARR11(3)        <---------AHL20(2)
<---------GLK1(1)                      --------->ZAT14       <---------ARR11(3)        --------->AHL20(2)
-------->ARR11(3)                      --------->ZAT18  --------->AHL20(2)             <---------AHL20(1)
---------ARR11(3)  <---------MYB46(3)  <---------ZAT14 <---------AHL20(2)       ----------->GT1
---->DOF2         --------->ALFIN1     <---------ZAT18--------->AHL20(2) --------->At4g35610    <---
-----ZmHOX2a(1)--------->DAG2        <---------------AtSPL8 --------->CCA1(1)--------->ALFIN1 ------
------TOE2(3) ---------->DOF2        --------------->AtSPL8 --------->RVE1(1)<---------ANAC46<------
 
aggatatttgacagacaaaaagtggttgtatttcagtatttgtgtactaaaataaaatttaaaatatcgttaaatcagatgtgtggataatttttttttc  9429300
                                       --------->At4g35610
                                       <---------At4g35610       ----------->GT1
<-----------GT1                       ------->TEIL              ----------->GT1               <-----
-------DOF2                        --------->ANAC58        ---------->DOF2                 <--------
---->ID1                           --------->ANAC58  ----------->GT1                       ---------
-----GT1    <-----------GT1     <-------TEIL         <---------YAB1 --------->AHL20(2) --------->CCA1(2)
 
tttttcccatatgtgtttccatatgaattagtaaatgcatgcatctgaagaacatgttgataaaaagaagataaaatagttagattgaagataagataat  9429400
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AGI:  At4g16760.1   
Description:  ACX1 (ACYL-COA OXIDASE 1). Identical to Acyl-coenzyme A oxidase 1, peroxisomal (ACX1) [Arabidopsis Thaliana] (GB:O65202;GB:O23518); similar to ACX5 (ACYL-COA OXIDASE 5), acyl-CoA oxidase [Arabidopsis thaliana] (TAIR:AT2G35690.1); similar to peroxisomal acyl-CoA oxidase 1A [Lycopersicon cheesmaniae] (GB:AAW78691.1); similar to peroxisomal acyl-CoA oxidase 1A [Lycopersicon esculentum] (GB:AAW78689.1); similar to Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon Esculentum (Tomato) (GB:2FON); contains InterPro domain Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal; (InterPro:IPR013764); contains InterPro doma
Range:  from: 9424655    to: 9428885    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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