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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                              --------->ALFIN1
                                                                             --------->TOE1(2)
                                                                             ------->PIF5
                                                                             <-------PIF5
                                                                             ------->MYC2
                                                                             <-------MYC2
                                                                             ------->MYC3
                                                                             <-------MYC3
                                                                             ------->MYC4
                                                                             <-------MYC4          -
                                                                            <---------ANAC55(2)    =
                                                                            ========================
                                                                            --------->O2           <
                                                              --------->ARR14(2)                   -
                                  <---------ANAC46        <---------MYB52(1)<<<<<<<<<<HY5          -
                                  <---------ANAC58       --------->LBD16----------------->PIF3(1)  -
                                  <---------ANAC58      --------->ATERF1(2) <---------TGA1a        =
                            <------MYB46(1)             <---------DREB2C(2) --------->TGA1a        <
                            <------MYB83           <---------ANAC58    ----------->HVH21           -
                           <---------AtMYB61       <---------ANAC58----------->HVH21               <
                           --------->MYB59    ------>ZmHOX2a(2)<---------GLK1(1)                   -
                         <---------MYB52(1)   --------->YAB1  <---------ARR14(2)                   -
-----ANAC46            --------->LBD16--------->ALFIN1  <---------ATERF1(2) <---------O2<---------YAB1
--->MYB59            <---------LBD16<---------ANAC46    <---------DEAR3(1) ------------>OsbHLH66 <--
 
gtatagactctaatctcgatttactccggtttggttatcgtgtgtgtgatcgtaacttgccggtggatttgcgacggacacgtgggatgttgtaattgtc  9372100
         --------->YAB1
 ----------->HVH21
<-------MYC3
------->MYC3  <---------MYB46(2)
-------->ANAC55(2)
==============================bZIP_DOF
===========================MYC_MYB
---------ANAC55(2)
-------->ANAC46
-------->ANAC58
-------->ANAC58      --------->AHL20(2)                 <-------TEIL
===========================MYC_MYB             --------->GLK1(2)
---------TGA1a<---------MYB111(2)             <---------ARR14(2)
-------->O2   --------->MYB46(3)              --------->ARR14(2)
---------O2   <---------MYB111(1)             <---------GLK1(2)
-------->TGA1a<------------MYB.PH3(2)      --------->HSFB2a(2)
-------->bZIP60(1) <----------DOF2         <---------HSFB2a(2)                                   ---
-----------DYT1   --------->TOE2(3)     <-----------GT1 ------->TEIL                    <---------YAB1
 
tcacgtgactcatcgtaactacctttaaattcgctactgtgattttccagattcttatgtacatttgtgacttcttcggtctatttttgttatgtttcca  9372200
                               <----------DOF2
                           <---------GLK1(2)
                      <-----------GT1
                     <---------YAB1
                   <---------ICU4                     <---------YAB1
                  <---------YAB1                    --------->AHL20(2)
    <---------YAB1--------->ICU4                    <---------AHL20(2)                <-----------GT1
------->DOF2     --------->TOE2(3)       <---------MYB52(1)                       <---------AHL20(2)
 
aaaagacatgaatgaagaaacattattacagtttcttttcttcccttaagcctatttaaaattgatatttctaaattcgaactatttattcactagtcga  9372300
                 <---------At4g35610
           --------->ARR14(2)
           <---------ARR14(2)
           <-----------ARR10
           --------->GLK1(2)                                                          <XXXXXXXXXXXXX
          <---------GLK1(1)                                                   <---------ANAC58
          --------->GLK1(1)            ----------->GT1                        <---------ANAC58
          <---------CCA1(2)         --------->MYB52(1) --------->YAB1         <---------ANAC46     <
      --------->ANAC46         <------NtERF2           ----------->GT1       <---------LBD16       -
      --------->ANAC58       ----------->GT1      --------->AHL20(2)    --------->AHL20(2)    <-----
      --------->ANAC58       <---------ANAC46   ----------->GT1         <---------AHL20(2) <--------
    <-----------GT1       --------->ALFIN1      <---------ANAC55(2) <---------TOE2(3)<---------YAB1<
 
agccttttaacgcaaatctgagctcttaagtggcgcaaaaaccggtttaatatgtaaatagtaactcggtttagattaatttcgggttatttttgtgatt  9372400
                               <---------YAB1
                              <---------AHL20(2)
                             --------->YAB1
                             <---------AHL20(2)
                             --------->AHL20(2)
                            <---------YAB1
                          <--------HAHB4
                          <---------ICU4
                          --------->YAB1
                         --------->AHL20(2)  --------->AHL20(1)
            --------->AHL20(2)<---------AHL20(1)             --------->DAG2
 ----------->GT1         --------->ICU4      --------->AHL20(2)
XXXXXXXMIR420      --------->At4g35610       <---------AHL20(1)
---------ZAT14     ----------->GT1           <---------AHL20(2)       <----------DOF2
-------->ZAT14     <---------At4g35610      --------->AHL20(2)   ---------->DOF2
----YAB1    <---------AHL20(1)--------->AHL20(1)            --------->DAG2
-YAB1       <---------AHL20(2)--------->AHL20(2)           ---------->DOF2
---------ZAT18   <-----------RAV1(2)   ----------->GT1<------ZmHOX2a(1)                           *TSS
 
agtgtagttaactaattaattcaggtgaataattatattagagagaaataaatttcaggacaaaaaggcaaagctttggtactgtctcttctcttctccg  9372500
                                                  ------>ZmHOX2a(1)                            -----
                                                  <----------DOF2                             <-----
                                                ------>ZmHOX2a(2)                            -------
                                               <------ZmHOX2a(2)                             <------
                                              --------->ARR11(3)                         ===========
                                              --------->ARR14(2)                         ===========
                                              <---------ARR11(3)                         ------>ZmHOX2a(1)
                           <----------DOF2    <---------ARR14(2)                        --------->TOE2(2)
                 <---------ARR11(3)          <---------GLK1(1)--------->ZAT14           --------->TOE1(2)
                 --------->ARR11(3)          --------->GLK1(1)<---------ZAT14    --------->TOE1(3)
   <-----------GT1 --------->TOE2(3)  ---------->DOF2       --------->ANAC46     --------->TOE2(3)
 
tcttcttcaccatttcgaaaaatctcaaaactttacagagagaaagagagatcctttacatatacttcactgtcttcttgaaaaccctaatcctccgatc  9372600
          <------ZmHOX2a(2)
          <---------ATHB12                                                                      <---
    --------->TOE1(2)                                      --------->LBD16                   <------
    --------->TOE2(2)                                     --------->LBD16                    -------
   --------->MYB46(3)                                    <---------LBD16                    --------
 <-----------GT1                 <---------ANAC58     <---------GLK1(1)           --------->LBD16---
->ZmHOX2a(2)                     <---------ANAC58    --------->ARR14(2)       <---------ARR14(2)<---
-ZmHOX2a(2)                      <---------ANAC46    <---------GLK1(2) <---------SPL7       <-------
-->ARR14(2)                 <---------ZAT2  --------->GLK1(2) --------->ARR14(2) <---------LBD16<---
---ARR14(2)         <---------GLK1(1)      <---------GLK1(2) <---------GLK1(2)--------->ARR14(2)<---
==HOX2a_HOX2a       --------->GLK1(1)     --------->At4g35610--------->ARR14(2) <---------LBD16<----
=================HOX2a_HOX2a<---------At4g35610 <----------DOF2      ---------->ID1        <--------
 
tgtttaacctccgatcaagagagatttcttcagcttgtgtgtatcagattcctttggattccccgattcttcgtcgtatcgaatcgggggatggcatttc  9372700
------ANAC58
---ARR14(2)
-->ARR14(2)
->GLK1(1)                                                   <---------TOE1(3)
------>LBD16                                                <---------TOE2(3)              ------->GAMYB
------ANAC58                                            --------->At4g35610   --------->ALFIN1
--GLK1(1)                                               --------->ZAT2      <---------ANAC58    ----
------ANAC55(1)                                         <---------At4g35610 <---------ANAC58    ----
------ANAC46                                     <---------ANAC58       --------->ETT(2) <---------TOE2(3)
-----LBD16                          <-----------GT1<------NtERF2       --------->ALFIN1 --------->MYB52(1)
--DOF2                        ----------->GT1    <---------ANAC58   <---------AtMYB61   <-----------GT1
 
cgtgaaatcagtgatgaaattggaggtgagaagaagttatttctatctatgggcgtagtagctgaggtttggaggtcgagcgtgaggctattaacgaact  9372800
              <------NtERF2
             <---------MYB46(3)
             --------->ABI4(2)                              --------->At4g35610
             ------>NtERF2              --------->ALFIN1    <---------At4g35610
       --------->MYB52(1)         --------->HSFB2a(2)     ---------->CDC5
     <----------DOF2              <---------HSFB2a(2)  --------->ZAT2
   --------->At4g35610            <---------TOE2(3)    <---------At4g35610
   <---------At4g35610        <----------DOF2          --------->ZAT14
   --------->ZAT2            <---------ANAC58          <---------ZAT14
   <---------ZAT2            <---------ANAC58          --------->At4g35610   <---------ANAC46
 <-----------RAV1(2)        --------->ZAT18            <---------ZAT2     <---------MYB52(1) <------
----->ANAC58--------->ALFIN1<---------ZAT18        <-----------GT1      --------->TOE2(3)  ---------
----->ANAC58<---------DEAR3(1)<-------GAMYB      <-----------GT1 ---------->DOF2          <---------AtMYB61
 
cgcctcagcttaacggtggctctcacaagagtgcgttatggaagtggcgatttttctctgctcagcccaaaagaaccgtaatgtggacatgggtttgtgg  9372900
                                                                                        --------->ZAT2
                                                          <---------ANAC58              <---------At4g35610
                                                    ------->TEIL                    --------->ANAC46
                                <-----------GT1    <---------ALFIN1               --------->MYB52(1)
                            <---------DAG2       --------->ANAC58             --------->ANAC58
                      --------->At4g35610<---------O2     <---------ANAC46    --------->ANAC58
    <----------DOF2   <---------At4g35610--------->O2     <---------ANAC58  ---------->DOF2   <-----
---TOE2(3)      <------ZmHOX2a(1)    <-----------HVH21   --------->ATHB12--------->WOX13(1)   ------
>MYB52(2)  <----------DOF2  <----------DOF2      --------->ANAC58     --------->ANAC46  --------->At4g35610
 
tttcatgcttttctctttaggagtcatctcacttttcactggtcacgttgtctcgcaccttgagtggtattctcagcaattaagcaaacggagcttactg  9373000
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AGI:  At4g16650.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66567.1); similar to OSIGBa0122F23.8 [Oryza sativa (indica cultivar-group)] (GB:CAH67151.1); similar to OSJNBa0010H02.2 [Oryza sativa (japonica cultivar-group)] (GB:CAE01682.2); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348)
Range:  from: 9372499    to: 9376431    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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