Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                               --------->ARR11(3)                                               <---------ARR11(3)            --------->LBD16                    --------->AGP1     --------->CCA1(2)                         <---------AGP1    --------->ARR11(3)                     ---------->DOF2    <---------ARR11(3)                    --------->AHL20(2) --------STY1(2)      <------ZmHOX2a(2)   <---------AHL20(2)                                   <----- ->DOF2    --------->ANAC46          ----------------->AGL3   ---------->DOF2             ---------->DOF2   tagatagatatacccgagagagagatcgatctacaaaaatccaattaaagatctataacgccttgaaagactcaaggctcttagaatgaagccaaagctt  9301600                                                 ------>NtERF2                                                 <------NtERF2                                                --------->RRTF1(3)                                                --------->ANAC46                                                --------->DEAR3(1)                                                --------->RAP2.6(2)                                                --------->RRTF1(2)                                                --------->RAP2.3(2)                                               <---------LBD16                                           =========================HOX2a_HOX2a                                        ------>MYB46(1)                                        ------>MYB83                                      --------->AtMYB61                                   <---------ALFIN1                        --------->LBD16                                   --------->AtMYB61                      <---------ANAC46                                  --------->MYB46(3)          ------>ZmHOX2a(2)                    --                               --------->MYB46(3)--------->LBD16         <---------LBD16           <-         ------->GAMYB     =======================HOX2a_HOX2a<------ZmHOX2a(2)                  -----        --------->MYB46(3) ------>ZmHOX2a(2)   --------->RAP2.3(1) <----------DOF2         <---------SPL7     --------->MYB46(3)  <---------ARR11(3)------>ZmHOX2a(1)--------->ARR14(2)         <---------ANAC58  --------->MYB46(3)     --------->ARR11(3)==========================HOX2a_HOX2a       <---------ANAC46 -----DOF2         --------->ARR11(3) <---------ALFIN1      <---------ARR14(2)         <---------ANAC58   ttcaacaacaacagcctcatagttcttgatcttaccaccaccatccttcgccgcaattttcagatcgtactttgtaccggagaccacttgcgtcgttccc  9301700                                                                       ----------->RAV1(1)                                                                    --------->ANAC58                                                                    --------->ANAC58      <-------TEIL                                                                    --------->ANAC46     --------->CCA1(2)                                                                    --------->RAP2.6(2) --------->ARR14(2)                                                                  --------->ATERF1(1)   <---------ARR14(2)                                                                 ------>NtERF2         --------->At4g35610     --------->TOE1(3)                                           <---------ATERF1(1)<------ZmHOX2a(2)     --------->TOE2(3)                                          <---------ETT(2)   <-----------HVH21  <---------ALFIN1         ------>ZmHOX2a(1)                    <---------RAP2.6(2)<---------ARR14(2) ------->ANAC46    ------>MYB46(1)                              --------->ETT(2) --------->LBD16 --------ALFIN1    ------>MYB83                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ARR14(2) ---->ANAC46   >>>>>>>>>MYB2                    ------>ZmHOX2a(1)<---------SPL7<---------LBD16    ---   tccacaaccttgacgaaaaccaacttctccttcgactccttgttatgttcctcgatggcatacttggcgaccgcaacaacatccggatcagatacattct  9301800                                     <---------ARR11(3)                                     --------->ARR11(3)                                     --------->ARR14(3)                              --------->AtMYB61                              <---------ALFIN1                              --------->DEAR3(1)                             <---------MYB55(2)                             --------->MYB46(3)                           <---------ALFIN1                        <------ZmHOX2a(1)                -                           --------->DEAR3(1)                      ========================HOX2a_HOX2a         --------->LBD16   --------->AtMYB61              --------->ALFIN1                         <-         ------>NtERF2    --------->MYB46(3)            --------->O2                             <---       <---------LBD16  --------->DEAR3(1)              <---------TGA1a                 --------->MYB46(3)     <---------SPL7     --------->AtMYB61    --------->ANAC46   ===========================HOX2a_HOX2a   --------->At4g35610  <---------ALFIN1     ----------->HVH21  <------ZmHOX2a(1)   <------ZmHOX2a(2) ------>ZmHOX2a(2)     --------->MYB46(3)------>MYB46(1)<---------O2               --------->AGP1---- ------>ATHB12       --------->AtMYB61   ------>MYB83   --------->TGA1a           --------->At4g35610   tgatcggcttccggctaccaagaccaccaccaccaccgagaccttccacgacggagacaagtgggaggaggatgagagagagacagatcaacgacttcat  9301900                    --------->TOE2(3)                                                        <-------        <---------ANAC58  --------->AHL20(2)                                                <--------        <---------ANAC58  <---------AHL20(2)                                                <--------      <-----------GT1<----------DOF2     <---------AHL20(2)                          <------MYB46(1) -------->YAB1      <---------DAG2  <---------TOE1(2)         <---------AHL20(2)     <------MYB83 --------YAB1  ------>ZmHOX2a(1) <---------ANAC46            --------->AHL20(2)  <---------ARR14(2) ------ICU4   --------->TOE2(3)  <---------ANAC58           <---------YAB1       --------->ARR14(2) ----->YAB1   --------->TOE1(3)  <---------ANAC58     <---------ANAC46           --------->ARR11(1) -   catcatattttcgtttccttaaccttttttaattttcgtgtgtttaatggtctctggtgtttattatatagacaagacttgtagatttggttttgctttg  9302000                                 ------>ZmHOX2a(2)                               <---------ARR14(2)                               <---------ARR11(3)       <---------ANAC58                               <---------ARR14(3)       ========================bZIP_DOF                               --------->ARR11(3)       <---------O2                               --------->ARR14(3)       <---------TGA1a                               --------->ARR14(2)       <---------ANAC46                              --------->GLK1(1)         <---------ANAC58                              <---------GLK1(1)         <---------bZIP60(2)                 --------->LBD16<------ZmHOX2a(2)    ----------->TGA1                <---------HSFC1(1)                   ----------->HVH21       ----------->HVH21   --------->LBD16          <-----------HVH21     --------->At4g35610  <---------ANAC46          --------->At5g28300     <---------At4g35610 <---------LBD16          <---------DEAR3(1)                   ----------->HVH21   --------->ZAT18       <---------At5g28300    <---------ANAC46                    <---------ARR14(2)  --------->ALFIN1      --------->MYB52(1)      --------->ANAC55(2)             <---------MYB52(1) ---DOF2        <---------HSFB2a(2)      <---------ANAC58            ================================ -ANAC58        --------->HSFB2a(2)      <---------ANAC46      <------------CBF<-----------HVH21 -ANAC58        --------->HSFC1(1)       <---------ANAC58 ----------->GT1<-----------GT1 -------->ALFIN1<XXXXXXXXXXXXXXXXXXXXMIR780.2*TSS<---------LBD16     <----------DOF2--------->ARR14(2)   gaatgtgggctgatagttccagaaatttacggagatctcaattgtgtgttacgcggtgacgagtgaattgtctttttacaccgtcagatttgacaactgg  9302100                                                                --------->ZAT18                                                                <---------ZAT18                                                                --------->ZAT14                                                              <-------MYC2                                                              ------->MYC3                                                              <-------MYC3                                                             <---------O2                                                             <---------TGA1a                                                             --------->TGA1a                                                             <---------ANAC55(2)                                                             <---------ANAC58                                                             --------->O2                                                             <---------ANAC58                                                             <---------ANAC55(1)                 <---------ARR11(3)                          <---------ANAC46                 --------->ARR11(3)                          --------->ANAC55(2)                --------->YAB1                            <---------MYB52(1)           <---------ANAC46                               ----------->HVH21          <------NtERF2                                 --------->ANAC58        --------->ALFIN1                                --------->ANAC58       ------->MYC3                                     <---------ANAC55(2)       <-------MYC3                                     --------->bZIP60(1)       <-------MYC4                                     <---------O2       ------->MYC4                                     --------->ANAC55(2)       ------->PIF5                                     --------->ANAC46       <-------PIF5                                     --------->bZIP60(2)       <-------MYC2                                     --------->O2       ------->MYC2                                     --------->TGA1a      <---------TGA1a                                   <---------TGA1a      --------->ANAC46                           =================MYC_MYB      --------->TGA1a                    <---------WRKY12<-----------HVH21                    -------      <---------O2                       <---------WRKY45<-----------TGA1          <---------ZAT18      --------->PIF3(3)                  <---------WRKY38(1) <---------bZIP60(2)   <---------ZAT14      >>>>>>>>>>HY5               ---------->DOF2======================MYC_MYB     --------->ZAT18      <---------PIF3(3)           ================================bZIP_DOF    --------->At4g35610   <      --------->O2  <---------------AtSPL8       <-------GAMYB------->MYC2--------->ALFIN1    <------      =======================================bZIP_DOF   <---------bZIP60(1)   <---------At4g35610   - ===============bZIP_DOF          =====================================bZIP_DOF    --------->ZAT14 <-   ataagtccacgtggcgaaagataatgtacaacatgttaaagagtcaacgagggttgtcccgtcacgtgtactcgtagtggagcagagcactaaatgggcc  9302200                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                  <------NtERF2              <---------DEAR3(2)                                 ------>NtERF2               <---------MYB46(3)                                 <---------DEAR3(2)         <---------TOE2(2)                                <---------DEAR3(1)          <---------DEAR3(1)                               --------->ATERF1(1)       =========================bZIP_DOF                             <---------ANAC58            <---------bZIP60(1)                             <---------ANAC46            --------->bZIP60(1)                             <---------ANAC58            <---------O2                         --------->CCA1(2)               --------->O2                         <---------GLK1(1)            <---------TOE1(1)       --------->ATHB12 --------->ARR14(2)            <---------TOE2(1) -->PCF2                <---------ARR14(2)           --------->SPL7 ---------ARR14(2)      <---------GLK1(2)          <---------SPL7                                 --- ---PCF2           <---------ATHB12              <---------------AtSPL8<----------DOF2          <---- -------->ARR14(2)--------->GLK1(2)  <---------At4g35610 <---------TGA1a                      ------- --------CCA1(2) --------->WOX13(1)  --------->At4g35610 --------->TGA1a         <---------ARR11(3)   catatatgttgatttgggccaatctagatttgcgtcggcaactcagtatttgtagtacgacgtcggttttgctctttagtcaagaactatgttcaatgtt  9302300                                       <---------MYB52(1)                                      <-------GAMYB                                 <------MYB83                                 <------MYB46(1)          ----------->GT1  <---------ANAC58             <--------P                --------->ALFIN1    ---------->DOF2  <---------ANAC58           --------->ATHB12          <---------ANAC46    <---------MYB52(1) ------>KAN4(2)              <---------MYB46(3)     <---------STY1(1)    ----------->GT1            - ---TEIL                 <---------WRKY18(1)        --------->STY1(1)--------->MYB46(3)    ---------- -->YAB1                ----------->HVH21   <---------AHL20(2)     --------->ANAC46        <---------MYB46(3)   cattccctgcttcttaatagcctggtttgactggttggcccgttgttttattccctagggtggaaaaatccacaaccgttaaaacccaaaccgtggttaa  9302400                                                      --------->TOE2(3)                                                      --------->YAB1                                                    <---------TOE2(3)                                                  <---------AHL20(2)                                          --------->ARR14(2)                               --------->AHL20(2)<---------AHL20(2)                               <---------AHL20(2)--------->AHL20(1)                 >>>>>>>>>MYB2                              <---------AHL20(2) --------->AHL20(2)        ------>MYB46(1)                --------->AHL20(2)        <---------ARR14(2)               ------>MYB83 -------->ATHB12<---------AHL20(2) --------->ARR11(3)----------->GT1     <---------MYB59 ->GT1<---------YAB1          --------->AHL20(2) <---------AHL20(1)      --------->AtMYB61        ---   attgatttgttattgcatttaaatctctctaaattaatatccagtatccaatataatgttaattctaaattaagaccaaactcgaaaaccaagttacaaa  9302500  Previous    Next  AGI:  At4g16500.1    Description:  cysteine protease inhibitor family protein / cystatin family protein. Identical to Cysteine proteinase inhibitor 4 precursor (CYS4) [Arabidopsis Thaliana] (GB:Q84WT8;GB:O23494); similar to cysteine protease inhibitor, putative / cystatin, putative [Arabidopsis thaliana] (TAIR:AT5G47550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40469.1); contains InterPro domain Proteinase inhibitor I25, cystatin; (InterPro:IPR000010); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) Range:  from: 9301411    to: 9302045    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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