Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------MYB52(2)                                                                --------->MYB52(1)                                                             --------->ANAC55(1)                                                             --------->ANAC46                                                             --------->ANAC58                                                             --------->ANAC58                                                             --------->AtLEC2                                                          --------->MYB46(3)                                                         ------>MYB83                                                         ------>MYB46(1)                                                        --------->MYB55(1)                                                       <---------MYB111(1)                                                       --------->MYB46(3)                                                       <---------MYB55(2)                                                      <--------------OsCBT                                                      --------->DEAR3(2)                                                     --------->PCF2                                                   <---------SPL7 --------->MYB46(3)                                                  --------->TOE2(1)           ----------->RAV1(1)                                                  --------->TOE1(1) --------->MYB52(1)            ---                       <---------ANAC58          --------------->AtSPL8   <---------WOX13(1)    <----                       <---------ANAC58        --------->YAB1<---------ANAC55(2)                -----              --------->ANAC58              --------------------->WRI1 --------->ICU4 <---------KAN4(2)              --------->ANAC46              <----------DOF2<---------ALFIN1  <----------ID1     <----              --------->ANAC58        <---------DAG2 --------->SPL7------->GAMYB ---------->DOF2-----     ---------->DOF2  <-----------------------TaNAC69(2)--------->ANAC46--------->ATHB12     --------   ccagagaaaaaggcccaagcaagaggcttactaaacaaaacctttcctttcatcgtacccaccacgcaacgaactgattgcaacaaagaataaaccgcag  9272700                      ----------->RAV1(2)                      ==============================RAV                     ------->TEIL             <---------ALFIN1             --------->AtMYB61            --------->MYB46(3)           ------>NtERF2 ------>GLK1(1)      --------->GLK1(2)        --------->YAB1                                     <--- -----At4g35610     --------->ARR14(2)     --------->YAB1----------->GT1                         ---- ---->ZAT2--------->RAP2.6(2)     --------->WOX13(1)    --------->DAG2                  ------------- -----ZAT2--------->ANAC46      <---------ATHB12       ---------->DOF2                 ---------->DOF2 ---->At4g35610     <---------ARR14(2)  ----------->RAV1(1) <-----------GT1        --------->ANAC58 ->LBD16 --------->MYB46(3)   --------->WOX13(1)<----------ID1                     --------->ANAC58   ctatcccattagccaccaccaagaacctgcatcaatcaatcccaacaataacaacaaaaaagttacaaactttgcaatctatctcaagtcaaagtactaa  9272800                                             <---------ZAT18                                             <---------ZAT14                                          <---------ANAC58                              --------->RAP2.6(2)      <---------RAP2.6(3)                              --------->DEAR3(1)      --------->RAP2.6(2)                              ------->GAMYB--------->LBD16              --------->YAB1 --------->MYB46(3)------->TEIL ------ARR14(2)         --------->ANAC46  <---------ANAC46                       <---------WRKY18(1) ----->ARR14(2)    --------->At4g35610    <---------ANAC58                --------->CCA1(2) -->AtSPL8   <---------YAB1--------->MYB52(1)--------->ZAT14           ----------->ARR10      <------   atccgaaatgggtttatgataagcttacacaaccgccttcatgtccgtgtacttggccgtcttcttgatagtgaagataagcttgacctcagtgtctgtc  9272900                                                            <---------DOF5.7(2)                                                           --------->WRKY12                                                          <---------MYB52(1)                                                          --------->DOF5.7(2)                                                     <---------ARR14(2)                                                     --------->ARR14(2)                                                    --------->ZAT2                                                    <---------ZAT2                                  -                                                    <---------At4g35610                             <                                                    --------->At4g35610                             -       ---------->DOF2                        ---------->DOF2                                <-------     --------->YAB1      ----------->ARR10 --------->At5g28300 --------->TOE2(3)             <------- -----HVH21      <------ZmHOX2a(1)     <---------ALFIN1  <-------GAMYB           <-----------GT1   <-   acaactagaataagcgcgaggagagcgaagacactgatggagcaccgtaagagcagctccgttaacctcattcttcgatctattaacttcatcttgcttc  9273000                       --------->ANAC58                       --------->ANAC58               <---------GLK1(1)        --------->ANAC46<------NtERF2       --------->LBD16 <------NtERF2      --------->HSFB2a(2)                                                                         ---      <---------HSFB2a(2)                                                              --------->LBD16    ------>ZmHOX2a(1) ------>NtERF2                                 --------->ANAC58  <---------ANAC46 -------->ARR14(2)   --------->DEAR3(1)                <-----------------AGL2         <---------ANAC58 ---------ARR14(2)  ------>NtERF2                     XXXXXXXXXXXXXXXXXXXX>MIR826     <---------ANAC58 ------>TEIL   --------->GLK1(1)                     --------->GLK1(2)                <---------ANAC55(2) --ANAC58     <---------GLK1(2)                      <---------ARR14(2)            <---------ARR14(2) --ANAC58<------ZmHOX2a(1)                           --------->ARR14(2)            --------->ARR14(2) --------CCA1(2)  <---------RAP2.6(2)        <---------ZAT6         --------->ANAC58 <---------------   tgtatcctccaggacagatttcggcccccaaaataaactcacttgtactcttaaaaatccgattttggacaagacaagaagacaggttccgtagagagac  9273100                                           --------->GLK1(1)             <---------ZAT18     --------->AHL20(2)                <---------ANAC46             -----           *TSS <---------ALFIN1 ----------->TBP                   <---------ANAC58   <------------CBF           <---------ZAT18 <---------TOE1(3)                  --------->ANAC46    <----------DOF2 ------->DOF2--------->ZAT18   <----------DOF2         <-----------GT1      ------>ZmHOX2a(1)  ------ --------TaNAC69(2)        <---------TOE2(3)        <----------DOF2<---------ANAC58 <---------YAB1   taaagagaaatagtgtccacactcggcttaaggctttaaatagagagttccatgcttttacttcacatcgcttgggtccttaggcttttattgaaaaata  9273200                                                                                     ----------->GT1     <------------CBF                                 <---------TOE2(3)        <-------TEIL         - ---->ARR11(3)      <---------TOE2(3)                 <---------TOE1(3)   --------->HSFB2a(2)      -- --->RVE1(1)       <---------DOF5.7(2)     <---------ANAC46               <---------HSFB2a(2)--------   tcaccaaaattgaaactgtgttaacgaataagtttgctactagttttgtgtaaattaaggctggacaaattagtttctagattcaactagttactaaaag  9273300                                               --------->YAB1                                               <--------HAHB4                                               <---------ICU4                                              <---------YAB1                                         <-----------GT1                       --------------->AGL15            <---------ZAT14           <---------ICU4                           <---------------AGL15 ------>MYB83 <---------ANAC46       --------->ICU4     --------->DEAR3(1)  <-----------GT1 ------>MYB46(1)<---------ZAT6       <---------YAB1  <---------ALFIN1   <----------DOF2 ---------->RAV1(1)                --------->YAB1   --------->MYB46(3)  <---------DAG2 ------->AtMYB61----------->GT1   <---------YAB1  <-----------GT1    <-----------GT1 -->DOF2    --------->ZAT14 <---------YAB1 <---------YAB1          <-----------GT1     ----------->GT1   accaacatatgaagtgaagtgttattagttattgttatcatttttactattattaccaccgtcttcatttttcactttttactatttgaaggaaaaaaca  9273400                                  <---------DAG2                                  <----------DOF2                          --------->YAB1       <---------MYB52(1)                         <---------YAB1      <---------ANAC58                         ----------->GT1     <---------ANAC58          ---------->ID1       ---------                      --------->ICU4        ---------->ID1            <-----------GT1      <------ZmHOX2a(1)        <-----------GT1<---------ICU4      <-----------GT1    <---------TOE1(3)    <----------DOF2   atagatgaattcactgaatagttcataatgaaaatactttttttttttcgtttcttaaaaacttatggtttttttcgtttttagtcttttagaggagaaa  9273500                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                        <---------GLK1(2)                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                        <---------GLK1(1)                                                                        --------->GLK1(1)    <-------                                                                       <---------ARR11(3)  <---------ANAC55(2)                       --------->GLK1(1)                     --------->ANAC55(2)    <---------LBD16                  --------->HSFB2a(2)                        <---------ANAC55(2)  <---------ARR14(2)                  <---------HSFC1(1)                     <-----------HVH21        --------->ARR14(2)                  --------->HSFC1(1)                --------->MYB52(1) --------->ARR11(3)  --------->ANAC55(2)                  <---------HSFB2a(2)       --------->DAG2<------ZmHOX2a(2)  ------>ZmHOX2a(1)   <---------GLK1(1) <------ZmHOX2a(1)     ---------->DOF2==========================HOX2a_HOX2a -->GT1      <----------DOF2  <----------DOF2  ----------->GT1        <<<<<<<<<RAP2.2<---------ANAC55(2)   attggatatttgaaacttttctaggaattcaactttctcttaagtaaaagtgtaaaacggatcacataatttagatatcctacaaatacggatacttatt  9273600  Previous    Next  AGI:  At4g16442.1    Description:  integral membrane family protein. Identical to UPF0497 membrane protein At4g16442 [Arabidopsis Thaliana] (GB:Q8L9B5;GB:O23488;GB:Q0WQU0); similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT2G35760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41794.1); contains InterPro domain Conserved hypothetical protein CHP01569, trans-membrane plant (InterPro:IPR006459); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 9271878    to: 9273111    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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