Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------DAG2                                                      <---------ICU4                                                   --------->YAB1                                                 <-----------GT1                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      <---------YAB1  --------->YAB1                                     <---------ARR11(3)      <----------DOF2                                     --------->ARR11(3)    --------->At4g35610                                    --------->YAB1<---------YAB1                               --------->At4g35610<xxxxxxxxxxxxxxxsmallRNA(le3)                 -----                           <---------ARR14(2)   <xxxxxxxxxxxxxxxxxsmallRNA(si3)                <-----                  --------->TOE2(3)<---------TOE2(3) <---------YAB1         <---------------AtSPL8     <---------WOX13(1)    --------->ARR14(2)  <xxxxxxxxxxxxxxxxxxsmallRNA(le3)           --------->TOE2(3)   --------->ATHB12       --------->GLK1(1)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          --------->YAB1 ---------At4g35610       <---------GLK1(1)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-------TEIL --------   tcagttcattgattcaaaaacctcactgaaatccgctaagataattgtttttatcatcatcagctttataacccaaaacaagtacatacaaacatcaatc  8713000                                                                                      <---------WOX13(1)         --------->YAB1                --------->AHL20(2)                           --------->ATHB12        --------->ZAT6              --------->TOE2(3)                           --------->ATHB12       <---------TOE2(3)          <---------ATHB12                             <---------YAB1  ------      <-----------GT1       --------->ANAC58                                   <------ZmHOX2a(2) ---->YAB1                  --------->ANAC58                                  --------->ARR11(3) ----ATHB12        <---------MYB52(2) --------->AHL20(2)      <---------ANAC46<---------ARR11(3) ->WOX13(1) --------->YAB1---------->DOF2         ---------->DOF2            <---------At4g35610   aaacctattaacaataatccaactaaacaaaagccaaacattaaaaaaaaaaaaaagcctcagtgtgtgtaacaaattcagatcattgattgaaaaacct  8713100                                                               ------>MYB83                                                               ------>MYB46(1)                                                             --------->AtMYB61               <---------YAB1                                ------->GAMYB              --------->ARR11(3)                            <---------MYB55(2)              <---------ARR11(3)                            --------->MYB46(3)             --------->YAB1                                 <---------MYB52(2)        --------->At4g35610                                --------->ANAC58    <---------ARR14(2)                                     -------->P    --------->ARR14(2)                    <---------YAB1   --------->ANAC58   <---------GLK1(1)            --------->YAB1            --------->WOX13(1)   --------->GLK1(1)           <---------YAB1          --------->TOE2(3)      --------->MYB52(1) --->TOE2(3)<---------TOE2(3)--------->YAB1    ----------->GT1----------->RAV1(1)           ---------   cactgaaatccgctaagataattgttttctatcatcataagcttataagtggaaaaacatcaaccaacaaaaaaaaacaataacagagaaatttgtcttc  8713200                                                                                          --------->CCA1(2)                                                                                          <------ZmHOX2a(2)                <---------ARR11(3)                                                       --------->AGP1                --------->ARR11(3)                                                       <---------AGP1              ----------->ARR10                                                          <---------ARR11(3)            --------->CCA1(2)       <---------AHL20(2)                                   --------->ARR11(3)     --------->YAB1       ---------->DOF2                                                <---------ARR14(2)    <---------ATHB12    ----------->HVH21                                         --------->GLK1(2)   ------>MYB46(1)    <---------ANAC58                                  <---------HSFB2a(2)   ------>MYB83 <---------GLK1(2)  --------->ICU4      ----------->GT1  --------->HSFB2a(2)------>ZmHOX2a(2)  --------->WOX13(1)  <---------ANAC46              --------->MYB52(1) <---------LBD16   --------->ARR14(2) ->ID1 ---------->DOF2<---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------CCA1(2)   aaaccaatcaaaagataagattttgggtgaaaggggaattaatactcagacagccaagggttaatcttcaacttctgggagaagaatcccagatctgaaa  8713300                  <---------CCA1(2)                  <xxxxxxxxxxxxxxxxsmallRNA(le3)                 <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                 <xxxxxxxxxxxxxxxxxsmallRNA(si3)                <xxxxxxxxxxxxxxxxxxsmallRNA(se3)               <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   --         --------->ZAT14                     --------->ANAC46                                    <---       <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                               ------       --------->ANAC46                    <---------ALFIN1                             --------->TOE2(3)    --------->ZAT18               <-----------GT1    *TSS                               --------->TOE1(3)    <---------ZAT18  --------->YAB1-------->P<---------ALFIN1               <----------DOF2   <------   ctctagtccacaatactcttgtatcatcaccatattcaaccccttccacatcccataaaactaagacatcacaaatctctttcacaaaaaccttaaatat  8713400                                                        <---------MYB111(2)                                                        <---------MYB52(2)                                                        <---------MYB59                                                        <---------MYB111(1)                                                        <---------MYB46(2)                                                       <---------ANAC55(2)                                                     <-----------GT1                                                 ---------->DOF2                                             --------->TOE1(3)    --------->WOX13(1)                                             --------->TOE2(3)  <---------YAB1                  <----                                            --------->ZAT6------>MYB46(1)                       <----                                          ------>MYB83 --------->ANAC55(2)               <---------GLK1(1) ---------->CBF        --------->ANAC58   ------>MYB46(1) --------->MYB52(1)             --------->GLK1(1) --------GT1           --------->ANAC58 --------->AtMYB61--------->MYB55(1)       ---------->DOF2---- --->ARR11(3)        --------->MYB52(1) <---------MYB46(2)------>MYB83        ---------->DOF2  <----- ---ICU4         --------->ANAC46       <---------MYB59--------->At4g35610 --------->AtLEC2   ------>ZmHOX2a(1)   caccaatttcaacatatatacacaaacgaaaatagtcacagacctaaccctaaaatcacctaacatatcattcagacatgaaaagaaagagagttcctat  8713500                                                                             <---------------AGL15                                                                          <---------ARR11(3)                                                                          <---------ARR11(1)                                                                         <---------CCA1(2)                                                                  --------->At4g35610                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                  <---------At4g35610                                                                 <---------ERF1                                                                 <---------MYB46(3)                                                                 <---------DEAR3(2)                                                                 <---------RAP2.3(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                <---------RAP2.3(2)                                                               <------NtERF2<-----------------AGL2                                                               <---------At4g35610                                                               --------->ATERF1(1)                                                              <---------RAP2.3(1)                                                              <---------DEAR3(2)                                                              <---------ORA47(2)                                                              <---------ATERF1(1)                                                             <---------DEAR4(1)                                                             <---------WRKY12--------------->AGL15                                                             <---------DREB2C(2)                   --                    --------->AHL20(2)         <---------TOE2(3)<---------RAP2.6(2)           -------          --------->ANAC58                     <---------TOE1(3)<---------DEAR3(1)   <---------GLK1(2)          --------->ANAC58          <---------At4g35610      <---------DEAR3(1)    <---------TOE1(3) -----YAB1--------->ANAC46          --------->ZAT2           <---------MYB46(3)    --------->MYB59<-- -----ATHB12        <---------YAB1  --------->At4g35610     --------->SPL7--------->ARR14(2)------>NtERF2 ----->ATHB12   --------->TOE2(3)   --------->ZAT14         <---------ORA47(1)     <---------TOE2(3) ----TOE1(2)    --------->TOE1(3)   <---------ZAT2         <-----------HVH21<-----------------AGL3<--   gatttgcattagacgaaaccttataaatacacagacacagcagacaattagggtttacttcggtcggcggctaccatatctattttaggttctcggccca  8713600                               ------->GAMYB                              <---------MYB55(2)                              <---------MYB52(2)                            ------>MYB46(1)                            ------>MYB83                            ----------->RAV1(1)                          <---------MYB59                                                  --------->DAG2                          --------->MYB46(3)                                              ---------->DOF2                      ----------->HVH21                                                  *TSS                    <---------ANAC58                                                    ------->GAMYB                    <---------ANAC58                                               <---------ATHB12                    --------->ANAC55(2)                                            --------->MYB46(3) <-----------GT1    <---------ANAC46                       <-----------GT1       --------->WOX13(1) <---------YAB1  <----------DOF2--------->ANAC46     <---------DAG2            ------------>CBF ------->YAB1  <---------At4g35610           --------->AHL20(2)               --------->ANAC58 ----->CBF     --------->ZAT2 --------->MYB46(3)     <----------DOF2          --------->ANAC58 -------ATHB51 --------->At4g35610           <---------AHL20(2)       <----------DOF2 <-------------- -------ATHB12 <---------ZAT2 <---------MYB111(2) <-----------GT1     <---------DAG2 --------->MYB52(1)   attatactaaatgggccagctttcgtgacccaacaaacaacttacatttattttactttattaacacattcactttacaaacccaatcaacgaaaagtcc  8713700                                                                             ---------->DOF2                                                      --------->ARR14(2)  ------->GAMYB                                                      --------->GLK1(2)  <------------AtMYB77                                                      <---------ARR14(2)------>MYB46(1)                                                   <------NtERF2        ------>MYB83                                                  ------>NtERF2         -------->P      --------->ANAC58                                                  --------->LBD16      --------->MYB52(1)        ----   --------->TOE2(3)                             --------->LBD16    ------>NtERF2       --------->ANAC58  <---------ANAC55(2)                            <---------LBD16   ------>NtERF2      ---------->DOF2  ----------->GT1                       <---------CCA1(2)          --------->LBD16 --------->ANAC58 -------WRI1                 <---------At4g35610<---------LBD16  <---------LBD16   --------->ANAC58   aaaaacgtaaaaacagaaatgaagaagattgagctcgtgttcataccttcgccgggaatcggccatctccggccaaccgtgaagctagcaaagcaactca  8713800                                                                    ------->GAMYB                                                           --------->ALFIN1                                   <---------ICU4        --------->LBD16                                  <---------YAB1        <---------DEAR3(1)                                <---------ICU4         <------NtERF2--------->DEAR3(1)                                --------->YAB1        <---------RAP2.3(1)                               <---------ATHB12       ------>NtERF2 --------->RAP2.6(2)                               --------->ICU4        --------->ANAC46                           --------->At5g28300       --------->DEAR3(1)                        <---------At5g28300 <---------HSFB2a(2)    --------->MYB46(3)                       --------->YAB1       --------->HSFC1(1)     <------------AtMYB77                      --------->MYB46(3)    --------->HSFB2a(2)    <---------MYB55(2)                      <---------ATHB12      <---------HSFC1(1)     --------->DEAR3(2) ----->At4g35610    --------->WOX13(1)<<<<<<<<<NAM   <---------DEAR3(1)   <---------CCA1(2)   <------   tcggaagcgaagaacattttttcaatcaccgtaatcatcatcccttctagaaacgacgccggtgatgcaaccgcctatatcgcatccctcgttgcagagt  8713900  Previous    Next  AGI:  At4g15258.1    Description:  SNOR37-2; snoRNA Range:  from: 8713226    to: 8713353    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g15260.1    Description:  UDP-glucoronosyl/UDP-glucosyl transferase family protein. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT4G15280.1); similar to Anthocyanidin 3-O-glucosyltransferase (Flavonol 3-O-glucosyltransferase 6) (UDP-glucose flavonoid 3-O-glucosyltransferase 6) (GB:Q40288); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 8713689    to: 8715339    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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